RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 CXCL11O14625 94 aa21.1■□□□□ 0.97
CPSF4-209ENST00000465132 ECM2O94769 699 aaPredicted RBP21.1■□□□□ 0.97
CPSF4-209ENST00000465132 PSMC4P43686 418 aa21.1■□□□□ 0.97
CPSF4-209ENST00000465132 DZIP1Q86YF9 867 aaKnown RBP21.1■□□□□ 0.97
CPSF4-209ENST00000465132 FAM163AQ96GL9 167 aaPredicted RBP21.1■□□□□ 0.97
CPSF4-209ENST00000465132 TRIM47Q96LD4 638 aa21.1■□□□□ 0.97
CPSF4-209ENST00000465132 OSBPL3Q9H4L5 887 aa21.1■□□□□ 0.97
CPSF4-209ENST00000465132 ABCF2Q9UG63 623 aa21.1■□□□□ 0.97
CPSF4-209ENST00000465132 MKI67P46013 3256 aaKnown RBP21.09■□□□□ 0.97
CPSF4-209ENST00000465132 PDE1AP54750 535 aa21.09■□□□□ 0.97
CPSF4-209ENST00000465132 SH3BP5LQ7L8J4 393 aa21.09■□□□□ 0.97
CPSF4-209ENST00000465132 TICAM2Q86XR7 235 aa21.09■□□□□ 0.97
CPSF4-209ENST00000465132 SLF2Q8IX21 1173 aa21.09■□□□□ 0.97
CPSF4-209ENST00000465132 SCYL3Q8IZE3 742 aa21.09■□□□□ 0.97
CPSF4-209ENST00000465132 HMG20BQ9P0W2 317 aa21.09■□□□□ 0.97
CPSF4-209ENST00000465132 SRRDQ9UH36 339 aa21.09■□□□□ 0.97
CPSF4-209ENST00000465132 AK9Q5TCS8 1911 aa21.08■□□□□ 0.97
CPSF4-209ENST00000465132 BRCA2P51587 3418 aa21.08■□□□□ 0.97
CPSF4-209ENST00000465132 MAP3K10Q02779 954 aa21.08■□□□□ 0.97
CPSF4-209ENST00000465132 HABP4Q5JVS0 413 aaKnown RBP21.08■□□□□ 0.97
CPSF4-209ENST00000465132 GPAT2Q6NUI2 795 aa21.08■□□□□ 0.97
CPSF4-209ENST00000465132 ZSCAN29Q8IWY8 852 aaPredicted RBP21.08■□□□□ 0.97
CPSF4-209ENST00000465132 PARK7Q99497 189 aaKnown RBP21.08■□□□□ 0.97
CPSF4-209ENST00000465132 HAUS7Q99871 368 aa21.08■□□□□ 0.97
CPSF4-209ENST00000465132 ZHX2Q9Y6X8 837 aa21.08■□□□□ 0.97
CPSF4-209ENST00000465132 FMNL1O95466 1100 aaPredicted RBP21.07■□□□□ 0.96
CPSF4-209ENST00000465132 PTPRAP18433 802 aa21.07■□□□□ 0.96
CPSF4-209ENST00000465132 OSBPP22059 807 aa21.07■□□□□ 0.96
CPSF4-209ENST00000465132 HOXD10P28358 340 aa21.07■□□□□ 0.96
CPSF4-209ENST00000465132 MCAMP43121 646 aa21.07■□□□□ 0.96
CPSF4-209ENST00000465132 BTDP43251 543 aa21.07■□□□□ 0.96
CPSF4-209ENST00000465132 ZSCAN25Q6NSZ9 544 aa21.07■□□□□ 0.96
CPSF4-209ENST00000465132 PLEKHM2Q8IWE5 1019 aa21.07■□□□□ 0.96
CPSF4-209ENST00000465132 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.07■□□□□ 0.96
CPSF4-209ENST00000465132 DDX4Q9NQI0 724 aaKnown RBP21.07■□□□□ 0.96
CPSF4-209ENST00000465132 PICK1Q9NRD5 415 aa21.07■□□□□ 0.96
CPSF4-209ENST00000465132 SALL3Q9BXA9 1300 aa21.06■□□□□ 0.96
CPSF4-209ENST00000465132 A0A0G2JLL6 359 aaPredicted RBP21.06■□□□□ 0.96
CPSF4-209ENST00000465132 DDTLA6NHG4 134 aaPredicted RBP21.06■□□□□ 0.96
CPSF4-209ENST00000465132 CYP2C8P10632 490 aa21.06■□□□□ 0.96
CPSF4-209ENST00000465132 BCRP11274 1271 aa21.06■□□□□ 0.96
CPSF4-209ENST00000465132 GSTO1P78417 241 aa21.06■□□□□ 0.96
CPSF4-209ENST00000465132 ERICH6Q7L0X2 663 aa21.06■□□□□ 0.96
CPSF4-209ENST00000465132 PRRT2Q7Z6L0 340 aaPredicted RBP21.06■□□□□ 0.96
CPSF4-209ENST00000465132 BOLA2Q9H3K6 86 aa21.06■□□□□ 0.96
CPSF4-209ENST00000465132 PAG1Q9NWQ8 432 aa21.06■□□□□ 0.96
CPSF4-209ENST00000465132 LRP2BPQ9P2M1 347 aa21.06■□□□□ 0.96
CPSF4-209ENST00000465132 MYH2Q9UKX2 1941 aa21.06■□□□□ 0.96
CPSF4-209ENST00000465132 MROH7-TTC4A0A0A0MT08 1334 aa21.05■□□□□ 0.96
CPSF4-209ENST00000465132 MECOMQ03112 1051 aa21.05■□□□□ 0.96
CPSF4-209ENST00000465132 MAP3K12Q12852 859 aa21.05■□□□□ 0.96
CPSF4-209ENST00000465132 PICALMQ13492 652 aa21.05■□□□□ 0.96
CPSF4-209ENST00000465132 FASTKD5Q7L8L6 764 aaKnown RBP21.05■□□□□ 0.96
CPSF4-209ENST00000465132 RAET1EQ8TD07 263 aa21.05■□□□□ 0.96
CPSF4-209ENST00000465132 DNAJC2Q99543 621 aaKnown RBP21.05■□□□□ 0.96
CPSF4-209ENST00000465132 AFG3L2Q9Y4W6 797 aa21.05■□□□□ 0.96
CPSF4-209ENST00000465132 DOCK2Q92608 1830 aa21.04■□□□□ 0.96
CPSF4-209ENST00000465132 GPR75-ASB3A0A0A6YYF3 556 aa21.04■□□□□ 0.96
CPSF4-209ENST00000465132 LDHCP07864 332 aa21.04■□□□□ 0.96
CPSF4-209ENST00000465132 SLURP2P0DP57 97 aa21.04■□□□□ 0.96
CPSF4-209ENST00000465132 GRK4P32298 578 aa21.04■□□□□ 0.96
CPSF4-209ENST00000465132 MTFR1Q15390 333 aa21.04■□□□□ 0.96
CPSF4-209ENST00000465132 ZNF384Q8TF68 577 aa21.04■□□□□ 0.96
CPSF4-209ENST00000465132 MYPNQ86TC9 1320 aa21.04■□□□□ 0.96
CPSF4-209ENST00000465132 CTNND1O60716 968 aaKnown RBP21.03■□□□□ 0.96
CPSF4-209ENST00000465132 ZAP70P43403 619 aa21.03■□□□□ 0.96
CPSF4-209ENST00000465132 FCGRTP55899 365 aa21.03■□□□□ 0.96
CPSF4-209ENST00000465132 RHBDL3P58872 404 aa21.03■□□□□ 0.96
CPSF4-209ENST00000465132 PI4K2BQ8TCG2 481 aa21.03■□□□□ 0.96
CPSF4-209ENST00000465132 EVI5LQ96CN4 794 aa21.03■□□□□ 0.96
CPSF4-209ENST00000465132 SNRKQ9NRH2 765 aa21.03■□□□□ 0.96
CPSF4-209ENST00000465132 RAI14Q9P0K7 980 aa21.03■□□□□ 0.96
CPSF4-209ENST00000465132 GOLIM4O00461 696 aa21.02■□□□□ 0.96
CPSF4-209ENST00000465132 NPM3O75607 178 aaKnown RBP21.02■□□□□ 0.96
CPSF4-209ENST00000465132 GADL1Q6ZQY3 521 aa21.02■□□□□ 0.96
CPSF4-209ENST00000465132 OTUD7AQ8TE49 926 aaPredicted RBP21.02■□□□□ 0.96
CPSF4-209ENST00000465132 SLC45A1Q9Y2W3 748 aa21.02■□□□□ 0.96
CPSF4-209ENST00000465132 CYP2E1P05181 493 aaPredicted RBP21.01■□□□□ 0.95
CPSF4-209ENST00000465132 ZFYP08048 801 aaPredicted RBP21.01■□□□□ 0.95
CPSF4-209ENST00000465132 PRKCZQ05513 592 aa21.01■□□□□ 0.95
CPSF4-209ENST00000465132 PI16Q6UXB8 463 aa21.01■□□□□ 0.95
CPSF4-209ENST00000465132 CERS3Q8IU89 383 aa21.01■□□□□ 0.95
CPSF4-209ENST00000465132 SHISA4Q96DD7 197 aa21.01■□□□□ 0.95
CPSF4-209ENST00000465132 NOL10Q9BSC4 688 aaKnown RBP21.01■□□□□ 0.95
CPSF4-209ENST00000465132 TRIM6-TRIM34B2RNG4 842 aa21■□□□□ 0.95
CPSF4-209ENST00000465132 TBC1D12O60347 775 aa21■□□□□ 0.95
CPSF4-209ENST00000465132 PDE4AP27815 886 aa21■□□□□ 0.95
CPSF4-209ENST00000465132 TBC1D9Q6ZT07 1266 aa21■□□□□ 0.95
CPSF4-209ENST00000465132 NSUN4Q96CB9 384 aaKnown RBP21■□□□□ 0.95
CPSF4-209ENST00000465132 FRMD4AQ9P2Q2 1039 aaPredicted RBP21■□□□□ 0.95
CPSF4-209ENST00000465132 TRIM75PA6NK02 468 aa20.99■□□□□ 0.95
CPSF4-209ENST00000465132 HIP1O00291 1037 aa20.99■□□□□ 0.95
CPSF4-209ENST00000465132 IDH1O75874 414 aaKnown RBP20.99■□□□□ 0.95
CPSF4-209ENST00000465132 MAP4K4O95819 1239 aaPredicted RBP20.99■□□□□ 0.95
CPSF4-209ENST00000465132 TTC22Q5TAA0 569 aa20.99■□□□□ 0.95
CPSF4-209ENST00000465132 NKX2-3Q8TAU0 364 aa20.99■□□□□ 0.95
CPSF4-209ENST00000465132 GABRQQ9UN88 632 aa20.99■□□□□ 0.95
CPSF4-209ENST00000465132 MAST2Q6P0Q8 1798 aa20.98■□□□□ 0.95
CPSF4-209ENST00000465132 GJB1P08034 283 aa20.98■□□□□ 0.95
CPSF4-209ENST00000465132 CCL5P13501 91 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms