RNA–Protein interactions for RNA: ENST00000465108.5

UBA3-207, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 804 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-207ENST00000465108 FOCADQ5VW36 1801 aa16.67■□□□□ 0.26
UBA3-207ENST00000465108 ATRNL1Q5VV63 1379 aa16.66■□□□□ 0.26
UBA3-207ENST00000465108 LDLRAD1Q5T700 205 aa16.66■□□□□ 0.26
UBA3-207ENST00000465108 AMOTL1Q8IY63 956 aa16.66■□□□□ 0.26
UBA3-207ENST00000465108 DNAJC5GQ8N7S2 189 aa16.66■□□□□ 0.26
UBA3-207ENST00000465108 ZKSCAN4Q969J2 545 aaPredicted RBP16.66■□□□□ 0.26
UBA3-207ENST00000465108 CCDC102AQ96A19 550 aa16.66■□□□□ 0.26
UBA3-207ENST00000465108 HHIPL1Q96JK4 782 aa16.66■□□□□ 0.26
UBA3-207ENST00000465108 FAM227BQ96M60 508 aa16.66■□□□□ 0.26
UBA3-207ENST00000465108 ELP3Q9H9T3 547 aa16.66■□□□□ 0.26
UBA3-207ENST00000465108 DCP1AQ9NPI6 582 aaPredicted RBP16.66■□□□□ 0.26
UBA3-207ENST00000465108 HELLSQ9NRZ9 838 aa16.66■□□□□ 0.26
UBA3-207ENST00000465108 ATP8A2Q9NTI2 1148 aa16.66■□□□□ 0.26
UBA3-207ENST00000465108 WDR33Q9C0J8 1336 aaKnown RBP16.66■□□□□ 0.26
UBA3-207ENST00000465108 BAZ2AQ9UIF9 1905 aaKnown RBP16.65■□□□□ 0.26
UBA3-207ENST00000465108 A0A0D9SFI3 127 aa16.65■□□□□ 0.26
UBA3-207ENST00000465108 HIP1O00291 1037 aa16.65■□□□□ 0.26
UBA3-207ENST00000465108 AOC2O75106 756 aa16.65■□□□□ 0.26
UBA3-207ENST00000465108 GNAT2P19087 354 aa16.65■□□□□ 0.26
UBA3-207ENST00000465108 INPP5BP32019 993 aa16.65■□□□□ 0.26
UBA3-207ENST00000465108 MCMDC2Q4G0Z9 681 aa16.65■□□□□ 0.26
UBA3-207ENST00000465108 CWC27Q6UX04 472 aaKnown RBP16.65■□□□□ 0.26
UBA3-207ENST00000465108 FOXP4Q8IVH2 680 aaPredicted RBP16.65■□□□□ 0.26
UBA3-207ENST00000465108 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.65■□□□□ 0.26
UBA3-207ENST00000465108 NAV1Q8NEY1 1877 aa16.65■□□□□ 0.26
UBA3-207ENST00000465108 CYP2D6P10635 497 aa16.64■□□□□ 0.25
UBA3-207ENST00000465108 TDO2P48775 406 aa16.64■□□□□ 0.25
UBA3-207ENST00000465108 VGLL4Q14135 290 aa16.64■□□□□ 0.25
UBA3-207ENST00000465108 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.64■□□□□ 0.25
UBA3-207ENST00000465108 RASAL3Q86YV0 1011 aa16.64■□□□□ 0.25
UBA3-207ENST00000465108 COL2A1P02458 1487 aaPredicted RBP16.64■□□□□ 0.25
UBA3-207ENST00000465108 GSG1L2A8MUP6 293 aa16.63■□□□□ 0.25
UBA3-207ENST00000465108 USP17L12C9JPN9 530 aa16.63■□□□□ 0.25
UBA3-207ENST00000465108 USP17L21D6R901 530 aa16.63■□□□□ 0.25
UBA3-207ENST00000465108 TBC1D12O60347 775 aa16.63■□□□□ 0.25
UBA3-207ENST00000465108 SLC10A3P09131 477 aa16.63■□□□□ 0.25
UBA3-207ENST00000465108 PLCD1P51178 756 aa16.63■□□□□ 0.25
UBA3-207ENST00000465108 TICAM2Q86XR7 235 aa16.63■□□□□ 0.25
UBA3-207ENST00000465108 NACAP1Q9BZK3 213 aa16.63■□□□□ 0.25
UBA3-207ENST00000465108 HERC5Q9UII4 1024 aaKnown RBP16.63■□□□□ 0.25
UBA3-207ENST00000465108 CYP2D7A0A087X1C5 515 aa16.62■□□□□ 0.25
UBA3-207ENST00000465108 UNCXA6NJT0 531 aa16.62■□□□□ 0.25
UBA3-207ENST00000465108 MINDY4BA8MYZ0 360 aa16.62■□□□□ 0.25
UBA3-207ENST00000465108 PATL2C9JE40 543 aaKnown RBP16.62■□□□□ 0.25
UBA3-207ENST00000465108 STK11IPQ8N1F8 1099 aa16.62■□□□□ 0.25
UBA3-207ENST00000465108 PICK1Q9NRD5 415 aa16.62■□□□□ 0.25
UBA3-207ENST00000465108 SERPINB13Q9UIV8 391 aa16.62■□□□□ 0.25
UBA3-207ENST00000465108 ZNF112Q9UJU3 913 aa16.62■□□□□ 0.25
UBA3-207ENST00000465108 OTOFQ9HC10 1997 aa16.62■□□□□ 0.25
UBA3-207ENST00000465108 PHF20L1A8MW92 1017 aa16.61■□□□□ 0.25
UBA3-207ENST00000465108 FAM155AB1AL88 458 aaPredicted RBP16.61■□□□□ 0.25
UBA3-207ENST00000465108 MFAP1P55081 439 aaKnown RBP16.61■□□□□ 0.25
UBA3-207ENST00000465108 KIF23Q02241 960 aaPredicted RBP16.61■□□□□ 0.25
UBA3-207ENST00000465108 MAP3K10Q02779 954 aa16.61■□□□□ 0.25
UBA3-207ENST00000465108 EVX2Q03828 476 aa16.61■□□□□ 0.25
UBA3-207ENST00000465108 NOGQ13253 232 aa16.61■□□□□ 0.25
UBA3-207ENST00000465108 CTR9Q6PD62 1173 aa16.61■□□□□ 0.25
UBA3-207ENST00000465108 IFNL3Q8IZI9 196 aa16.61■□□□□ 0.25
UBA3-207ENST00000465108 OPTNQ96CV9 577 aa16.61■□□□□ 0.25
UBA3-207ENST00000465108 OTUD5Q96G74 571 aa16.61■□□□□ 0.25
UBA3-207ENST00000465108 WNK4Q96J92 1243 aa16.61■□□□□ 0.25
UBA3-207ENST00000465108 NAPBQ9H115 298 aa16.61■□□□□ 0.25
UBA3-207ENST00000465108 SNCAIPQ9Y6H5 919 aa16.61■□□□□ 0.25
UBA3-207ENST00000465108 CTNND1O60716 968 aaKnown RBP16.6■□□□□ 0.25
UBA3-207ENST00000465108 GDF11O95390 407 aa16.6■□□□□ 0.25
UBA3-207ENST00000465108 VPS53Q5VIR6 699 aa16.6■□□□□ 0.25
UBA3-207ENST00000465108 SPRYD7Q5W111 196 aa16.6■□□□□ 0.25
UBA3-207ENST00000465108 GIMAP6Q6P9H5 292 aa16.6■□□□□ 0.25
UBA3-207ENST00000465108 ZNF589Q86UQ0 364 aaPredicted RBP16.6■□□□□ 0.25
UBA3-207ENST00000465108 DYNLL2Q96FJ2 89 aa16.6■□□□□ 0.25
UBA3-207ENST00000465108 ZIC5Q96T25 663 aa16.6■□□□□ 0.25
UBA3-207ENST00000465108 EPB41L4AQ9HCS5 686 aaPredicted RBP16.6■□□□□ 0.25
UBA3-207ENST00000465108 ARPP21Q9UBL0 812 aaPredicted RBP16.6■□□□□ 0.25
UBA3-207ENST00000465108 CCDC171Q6TFL3 1326 aa16.6■□□□□ 0.25
UBA3-207ENST00000465108 SIPA1L1O43166 1804 aa16.59■□□□□ 0.25
UBA3-207ENST00000465108 CHMLP26374 656 aa16.59■□□□□ 0.25
UBA3-207ENST00000465108 MAP2K2P36507 400 aa16.59■□□□□ 0.25
UBA3-207ENST00000465108 C12orf60Q5U649 245 aa16.59■□□□□ 0.25
UBA3-207ENST00000465108 ERO1BQ86YB8 467 aa16.59■□□□□ 0.25
UBA3-207ENST00000465108 SCYL3Q8IZE3 742 aa16.59■□□□□ 0.25
UBA3-207ENST00000465108 RUFY2Q8WXA3 655 aa16.59■□□□□ 0.25
UBA3-207ENST00000465108 EHD4Q9H223 541 aa16.59■□□□□ 0.25
UBA3-207ENST00000465108 DNAJC18Q9H819 358 aa16.59■□□□□ 0.25
UBA3-207ENST00000465108 SMIM22K7EJ46 135 aa16.58■□□□□ 0.24
UBA3-207ENST00000465108 ABCB7O75027 752 aa16.58■□□□□ 0.24
UBA3-207ENST00000465108 CAP2P40123 477 aa16.58■□□□□ 0.24
UBA3-207ENST00000465108 RRP1BQ14684 758 aaKnown RBP16.58■□□□□ 0.24
UBA3-207ENST00000465108 CERKLQ49MI3 558 aaPredicted RBP16.58■□□□□ 0.24
UBA3-207ENST00000465108 BMP2KLQ5H9B9 411 aa16.58■□□□□ 0.24
UBA3-207ENST00000465108 NOL9Q5SY16 702 aaKnown RBP16.58■□□□□ 0.24
UBA3-207ENST00000465108 SLC44A5Q8NCS7 719 aa16.58■□□□□ 0.24
UBA3-207ENST00000465108 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.58■□□□□ 0.24
UBA3-207ENST00000465108 SPDYE5A6NIY4 337 aa16.57■□□□□ 0.24
UBA3-207ENST00000465108 MPHOSPH10O00566 681 aaKnown RBP16.57■□□□□ 0.24
UBA3-207ENST00000465108 ZBTB48P10074 688 aaPredicted RBP16.57■□□□□ 0.24
UBA3-207ENST00000465108 HSPD1P10809 573 aaKnown RBP16.57■□□□□ 0.24
UBA3-207ENST00000465108 GJA5P36382 358 aa16.57■□□□□ 0.24
UBA3-207ENST00000465108 SBK1Q52WX2 424 aa16.57■□□□□ 0.24
UBA3-207ENST00000465108 CCDC84Q86UT8 332 aaPredicted RBP16.57■□□□□ 0.24
UBA3-207ENST00000465108 METTL16Q86W50 562 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms