RNA–Protein interactions for RNA: ENST00000464316.5

CCNL1-204, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-204ENST00000464316 CFAP58Q5T655 872 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 SPATA1Q5VX52 437 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 FBXW10Q5XX13 1052 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 WWC2Q6AWC2 1192 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 EMBQ6PCB8 327 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 KSR2Q6VAB6 950 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 ARMC9Q7Z3E5 817 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 YTHDF3Q7Z739 585 aaKnown RBP4.37□□□□□ -1.71
CCNL1-204ENST00000464316 PRPF38AQ8NAV1 312 aaKnown RBP4.37□□□□□ -1.71
CCNL1-204ENST00000464316 ARMC2Q8NEN0 867 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 ATRIPQ8WXE1 791 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 DPF2Q92785 391 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 P3H4Q92791 437 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 KLC4Q9NSK0 619 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 HPCAL4Q9UM19 191 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 GUCA1BQ9UMX6 200 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 CRB1P82279 1406 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 CDHR2Q9BYE9 1310 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 CARMIL3Q8ND23 1372 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 GRM8O00222 908 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 FSBPO95073 299 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 CYP21A2P08686 494 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 XBP1P17861 261 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 GGCXP38435 758 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 PLCD1P51178 756 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 PNOCQ13519 176 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 POSTNQ15063 836 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 RBBP5Q15291 538 aaKnown RBP4.36□□□□□ -1.71
CCNL1-204ENST00000464316 CCDC122Q5T0U0 273 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 SND1Q7KZF4 910 aaKnown RBP eCLIP4.36□□□□□ -1.71
CCNL1-204ENST00000464316 TRIM22Q8IYM9 498 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 CCDC47Q96A33 483 aaKnown RBP4.36□□□□□ -1.71
CCNL1-204ENST00000464316 EAF2Q96CJ1 260 aaPredicted RBP4.36□□□□□ -1.71
CCNL1-204ENST00000464316 TSGA10Q9BZW7 698 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 PLEKHA4Q9H4M7 779 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 PHAXQ9H814 394 aaKnown RBP4.36□□□□□ -1.71
CCNL1-204ENST00000464316 KAT14Q9H8E8 782 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 LUC7LQ9NQ29 371 aaKnown RBP4.36□□□□□ -1.71
CCNL1-204ENST00000464316 JADE2Q9NQC1 790 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 CPSF2Q9P2I0 782 aaKnown RBP4.36□□□□□ -1.71
CCNL1-204ENST00000464316 MAGEC2Q9UBF1 373 aaPredicted RBP4.36□□□□□ -1.71
CCNL1-204ENST00000464316 KLF18A0A0U1RQI7 1052 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 TMEM232C9JQI7 657 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 SHOX2O60902 331 aaPredicted RBP4.36□□□□□ -1.71
CCNL1-204ENST00000464316 TACC1O75410 805 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 BMP15O95972 392 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 GPTP24298 496 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 EPHB4P54760 987 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 MAP2K1Q02750 393 aaPredicted RBP4.36□□□□□ -1.71
CCNL1-204ENST00000464316 KIF5AQ12840 1032 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 MLECQ14165 292 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 SPECC1Q5M775 1068 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 RIC3Q7Z5B4 369 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 NCOA7Q8NI08 942 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 MIEF2Q96C03 454 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 RBM33Q96EV2 1170 aaKnown RBP4.36□□□□□ -1.71
CCNL1-204ENST00000464316 ALG1Q9BT22 464 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 ZRANB1Q9UGI0 708 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 GGA2Q9UJY4 613 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 LUC7L2Q9Y383 392 aaKnown RBP4.36□□□□□ -1.71
CCNL1-204ENST00000464316 EPN1Q9Y6I3 576 aaPredicted RBP4.36□□□□□ -1.71
CCNL1-204ENST00000464316 MED23Q9ULK4 1368 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 ANO9A1A5B4 782 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 SOWAHDA6NJG2 315 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 LRRIQ3A6PVS8 624 aaPredicted RBP4.36□□□□□ -1.71
CCNL1-204ENST00000464316 MFAP3LO75121 409 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 KRT9P35527 623 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 RBL2Q08999 1139 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 GOLGA8FQ08AF8 430 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 GOLGA8DPQ0D2H9 430 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 NR1I3Q14994 352 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 NBPF20Q3BBV1 942 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 PREPLQ4J6C6 727 aaPredicted RBP4.36□□□□□ -1.71
CCNL1-204ENST00000464316 HSP90AA4PQ58FG1 418 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 CCNI2Q6ZMN8 369 aaPredicted RBP4.36□□□□□ -1.71
CCNL1-204ENST00000464316 NFXL1Q6ZNB6 911 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 IFT20Q8IY31 132 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 OR8K1Q8NGG5 319 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 ALS2CR12Q96Q35 445 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 SH3GL3Q99963 347 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 SELENOOQ9BVL4 669 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.36□□□□□ -1.71
CCNL1-204ENST00000464316 MRPL44Q9H9J2 332 aaKnown RBP4.36□□□□□ -1.71
CCNL1-204ENST00000464316 NCOA5Q9HCD5 579 aaKnown RBP4.36□□□□□ -1.71
CCNL1-204ENST00000464316 PA2G4Q9UQ80 394 aaKnown RBP4.36□□□□□ -1.71
CCNL1-204ENST00000464316 SHANK3Q9BYB0 1731 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 FMN2Q9NZ56 1722 aa4.36□□□□□ -1.71
CCNL1-204ENST00000464316 CD163L1Q9NR16 1453 aa4.35□□□□□ -1.71
CCNL1-204ENST00000464316 A0A1B0GTH6 734 aa4.35□□□□□ -1.71
CCNL1-204ENST00000464316 SRRM3A6NNA2 597 aaPredicted RBP4.35□□□□□ -1.71
CCNL1-204ENST00000464316 FOXO3O43524 673 aa4.35□□□□□ -1.71
CCNL1-204ENST00000464316 ZFYP08048 801 aaPredicted RBP4.35□□□□□ -1.71
CCNL1-204ENST00000464316 GCKP35557 465 aa4.35□□□□□ -1.71
CCNL1-204ENST00000464316 IARSP41252 1262 aaKnown RBP4.35□□□□□ -1.71
CCNL1-204ENST00000464316 ODF2Q5BJF6 829 aa4.35□□□□□ -1.71
CCNL1-204ENST00000464316 RILPL1Q5EBL4 403 aa4.35□□□□□ -1.71
CCNL1-204ENST00000464316 RESP18Q5W5W9 173 aa4.35□□□□□ -1.71
CCNL1-204ENST00000464316 MSL1Q68DK7 614 aa4.35□□□□□ -1.71
CCNL1-204ENST00000464316 KLHL10Q6JEL2 608 aa4.35□□□□□ -1.71
CCNL1-204ENST00000464316 FNBP4Q8N3X1 1017 aaPredicted RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms