RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-210ENST00000464313 WDR18Q9BV38 432 aa6.86□□□□□ -1.31
PTPN12-210ENST00000464313 PPP4R2Q9NY27 417 aa6.86□□□□□ -1.31
PTPN12-210ENST00000464313 CYP27C1Q4G0S4 372 aa6.85□□□□□ -1.31
PTPN12-210ENST00000464313 TPTE2Q6XPS3 522 aa6.85□□□□□ -1.31
PTPN12-210ENST00000464313 ATG4DQ86TL0 474 aaPredicted RBP6.85□□□□□ -1.31
PTPN12-210ENST00000464313 BHLHE22Q8NFJ8 381 aaPredicted RBP6.85□□□□□ -1.31
PTPN12-210ENST00000464313 FAM84AQ96KN4 292 aa6.85□□□□□ -1.31
PTPN12-210ENST00000464313 TOX2Q96NM4 488 aa6.85□□□□□ -1.31
PTPN12-210ENST00000464313 BCL11AQ9H165 835 aa6.85□□□□□ -1.31
PTPN12-210ENST00000464313 TTF2Q9UNY4 1162 aaKnown RBP6.85□□□□□ -1.31
PTPN12-210ENST00000464313 B3GALT4O96024 378 aa6.84□□□□□ -1.31
PTPN12-210ENST00000464313 VAMP1P23763 118 aa6.84□□□□□ -1.31
PTPN12-210ENST00000464313 CFPP27918 469 aa6.84□□□□□ -1.31
PTPN12-210ENST00000464313 TMEM87AQ8NBN3 555 aa6.84□□□□□ -1.31
PTPN12-210ENST00000464313 LRRN4CLQ8ND94 238 aa6.84□□□□□ -1.31
PTPN12-210ENST00000464313 NETO1Q8TDF5 533 aa6.84□□□□□ -1.31
PTPN12-210ENST00000464313 MISP3Q96FF7 219 aa6.84□□□□□ -1.31
PTPN12-210ENST00000464313 ZFYVE1Q9HBF4 777 aa6.84□□□□□ -1.31
PTPN12-210ENST00000464313 GPN3Q9UHW5 284 aaPredicted RBP6.84□□□□□ -1.31
PTPN12-210ENST00000464313 JAG2Q9Y219 1238 aa6.84□□□□□ -1.31
PTPN12-210ENST00000464313 E9PSI1 815 aa6.83□□□□□ -1.32
PTPN12-210ENST00000464313 TMPRSS2O15393 492 aa6.83□□□□□ -1.32
PTPN12-210ENST00000464313 LIG1P18858 919 aa6.83□□□□□ -1.32
PTPN12-210ENST00000464313 PTPN12Q05209 780 aaKnown RBP6.83□□□□□ -1.32
PTPN12-210ENST00000464313 MESP2Q0VG99 397 aa6.83□□□□□ -1.32
PTPN12-210ENST00000464313 WDR89Q96FK6 387 aaPredicted RBP6.83□□□□□ -1.32
PTPN12-210ENST00000464313 CELA3AP09093 270 aa6.82□□□□□ -1.32
PTPN12-210ENST00000464313 XRCC5P13010 732 aaKnown RBP6.82□□□□□ -1.32
PTPN12-210ENST00000464313 LCNL1Q6ZST4 164 aa6.82□□□□□ -1.32
PTPN12-210ENST00000464313 ZSCAN18Q8TBC5 510 aaPredicted RBP6.82□□□□□ -1.32
PTPN12-210ENST00000464313 PI4K2BQ8TCG2 481 aa6.82□□□□□ -1.32
PTPN12-210ENST00000464313 LEFTY1O75610 366 aa6.81□□□□□ -1.32
PTPN12-210ENST00000464313 TAF1CQ15572 869 aaPredicted RBP6.81□□□□□ -1.32
PTPN12-210ENST00000464313 C1QL4Q86Z23 238 aa6.81□□□□□ -1.32
PTPN12-210ENST00000464313 DDX54Q8TDD1 881 aaKnown RBP6.81□□□□□ -1.32
PTPN12-210ENST00000464313 ZC3H12CQ9C0D7 883 aaKnown RBP6.81□□□□□ -1.32
PTPN12-210ENST00000464313 VAV3Q9UKW4 847 aa6.81□□□□□ -1.32
PTPN12-210ENST00000464313 PPM1HQ9ULR3 514 aa6.81□□□□□ -1.32
PTPN12-210ENST00000464313 USP31Q70CQ4 1352 aa6.81□□□□□ -1.32
PTPN12-210ENST00000464313 F6X3S4 739 aa6.8□□□□□ -1.32
PTPN12-210ENST00000464313 ENC1O14682 589 aa6.8□□□□□ -1.32
PTPN12-210ENST00000464313 PAGE1O75459 146 aa6.8□□□□□ -1.32
PTPN12-210ENST00000464313 ITGAEP38570 1179 aa6.8□□□□□ -1.32
PTPN12-210ENST00000464313 RAP1GAPP47736 663 aa6.8□□□□□ -1.32
PTPN12-210ENST00000464313 PRKCQQ04759 706 aa6.8□□□□□ -1.32
PTPN12-210ENST00000464313 CCDC85BQ15834 202 aaPredicted RBP6.8□□□□□ -1.32
PTPN12-210ENST00000464313 MAP3K11Q16584 847 aa6.8□□□□□ -1.32
PTPN12-210ENST00000464313 AOC3Q16853 763 aa6.8□□□□□ -1.32
PTPN12-210ENST00000464313 TTLL10Q6ZVT0 673 aa6.8□□□□□ -1.32
PTPN12-210ENST00000464313 SIAH1Q8IUQ4 282 aa6.8□□□□□ -1.32
PTPN12-210ENST00000464313 NECAB3Q96P71 396 aaPredicted RBP6.8□□□□□ -1.32
PTPN12-210ENST00000464313 CCDC86Q9H6F5 360 aaKnown RBP6.8□□□□□ -1.32
PTPN12-210ENST00000464313 PIDD1Q9HB75 910 aa6.8□□□□□ -1.32
PTPN12-210ENST00000464313 CRIM1Q9NZV1 1036 aa6.8□□□□□ -1.32
PTPN12-210ENST00000464313 RAPGEFL1Q9UHV5 662 aa6.8□□□□□ -1.32
PTPN12-210ENST00000464313 ST13P50502 369 aaKnown RBP6.79□□□□□ -1.32
PTPN12-210ENST00000464313 FANCCQ00597 558 aa6.79□□□□□ -1.32
PTPN12-210ENST00000464313 RPS26P11Q5JNZ5 115 aaPredicted RBP6.79□□□□□ -1.32
PTPN12-210ENST00000464313 C9orf131Q5VYM1 1079 aa6.79□□□□□ -1.32
PTPN12-210ENST00000464313 FANCD2OSQ96PS1 177 aa6.79□□□□□ -1.32
PTPN12-210ENST00000464313 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.79□□□□□ -1.32
PTPN12-210ENST00000464313 LMCD1Q9NZU5 365 aa6.79□□□□□ -1.32
PTPN12-210ENST00000464313 PLAGL2Q9UPG8 496 aa6.79□□□□□ -1.32
PTPN12-210ENST00000464313 ZNF862O60290 1169 aa6.78□□□□□ -1.32
PTPN12-210ENST00000464313 AP3B2Q13367 1082 aa6.78□□□□□ -1.32
PTPN12-210ENST00000464313 IFI16Q16666 785 aaKnown RBP6.78□□□□□ -1.32
PTPN12-210ENST00000464313 LRRC56Q8IYG6 542 aaPredicted RBP6.78□□□□□ -1.32
PTPN12-210ENST00000464313 SMYD4Q8IYR2 804 aaPredicted RBP6.78□□□□□ -1.32
PTPN12-210ENST00000464313 STK35Q8TDR2 534 aa6.78□□□□□ -1.32
PTPN12-210ENST00000464313 PRDM7Q9NQW5 492 aa6.78□□□□□ -1.32
PTPN12-210ENST00000464313 DISC1Q9NRI5 854 aa6.78□□□□□ -1.32
PTPN12-210ENST00000464313 TMEM39AQ9NV64 488 aa6.78□□□□□ -1.32
PTPN12-210ENST00000464313 SYNGAP1Q96PV0 1343 aa6.77□□□□□ -1.32
PTPN12-210ENST00000464313 SCAMP3O14828 347 aaKnown RBP6.77□□□□□ -1.33
PTPN12-210ENST00000464313 RNGTTO60942 597 aaKnown RBP6.77□□□□□ -1.33
PTPN12-210ENST00000464313 TCF3P15923 654 aa6.77□□□□□ -1.33
PTPN12-210ENST00000464313 ZNF76P36508 570 aa6.77□□□□□ -1.33
PTPN12-210ENST00000464313 OXCT1P55809 520 aa6.77□□□□□ -1.33
PTPN12-210ENST00000464313 HDLBPQ00341 1268 aaKnown RBP6.77□□□□□ -1.33
PTPN12-210ENST00000464313 ID3Q02535 119 aa6.77□□□□□ -1.33
PTPN12-210ENST00000464313 TTLL4Q14679 1199 aa6.77□□□□□ -1.33
PTPN12-210ENST00000464313 RASIP1Q5U651 963 aa6.77□□□□□ -1.33
PTPN12-210ENST00000464313 ARHGAP27Q6ZUM4 889 aa6.77□□□□□ -1.33
PTPN12-210ENST00000464313 ANKRD24Q8TF21 1146 aa6.77□□□□□ -1.33
PTPN12-210ENST00000464313 HRASLS5Q96KN8 279 aa6.77□□□□□ -1.33
PTPN12-210ENST00000464313 ATXN3LQ9H3M9 355 aa6.77□□□□□ -1.33
PTPN12-210ENST00000464313 LRRC10BA6NIK2 292 aa6.76□□□□□ -1.33
PTPN12-210ENST00000464313 CEACAM5P06731 702 aa6.76□□□□□ -1.33
PTPN12-210ENST00000464313 ZSCAN22P10073 491 aaPredicted RBP6.76□□□□□ -1.33
PTPN12-210ENST00000464313 HCLS1P14317 486 aaPredicted RBP6.76□□□□□ -1.33
PTPN12-210ENST00000464313 ITIH2P19823 946 aa6.76□□□□□ -1.33
PTPN12-210ENST00000464313 PPP2R3AQ06190 1150 aa6.76□□□□□ -1.33
PTPN12-210ENST00000464313 PCNX4Q63HM2 1172 aa6.76□□□□□ -1.33
PTPN12-210ENST00000464313 SV2BQ7L1I2 683 aa6.76□□□□□ -1.33
PTPN12-210ENST00000464313 DUSP23Q9BVJ7 150 aa6.76□□□□□ -1.33
PTPN12-210ENST00000464313 CEP44Q9C0F1 390 aa6.76□□□□□ -1.33
PTPN12-210ENST00000464313 COPRSQ9NQ92 184 aa6.76□□□□□ -1.33
PTPN12-210ENST00000464313 IGSF5Q9NSI5 407 aa6.76□□□□□ -1.33
PTPN12-210ENST00000464313 MLANAQ16655 118 aa6.75□□□□□ -1.33
PTPN12-210ENST00000464313 ZNF394Q53GI3 561 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms