RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 NBPF11Q86T75 865 aa16.28■□□□□ 0.2
COMMD3-205ENST00000463688 ZFPM1Q8IX07 1006 aa16.28■□□□□ 0.2
COMMD3-205ENST00000463688 SIRT2Q8IXJ6 389 aa16.28■□□□□ 0.2
COMMD3-205ENST00000463688 SH3RF3Q8TEJ3 882 aaPredicted RBP16.28■□□□□ 0.2
COMMD3-205ENST00000463688 TGFBRAP1Q8WUH2 860 aa16.28■□□□□ 0.2
COMMD3-205ENST00000463688 PTPN18Q99952 460 aa16.28■□□□□ 0.2
COMMD3-205ENST00000463688 CRNKL1Q9BZJ0 848 aaKnown RBP16.28■□□□□ 0.2
COMMD3-205ENST00000463688 DDX4Q9NQI0 724 aaKnown RBP16.28■□□□□ 0.2
COMMD3-205ENST00000463688 MAGEB6P1A0A0J9YX57 407 aa16.27■□□□□ 0.19
COMMD3-205ENST00000463688 BTBD19C9JJ37 291 aa16.27■□□□□ 0.19
COMMD3-205ENST00000463688 ZNF384Q8TF68 577 aa16.27■□□□□ 0.19
COMMD3-205ENST00000463688 DCTPP1Q9H773 170 aa16.27■□□□□ 0.19
COMMD3-205ENST00000463688 PIH1D3Q9NQM4 214 aaKnown RBP16.27■□□□□ 0.19
COMMD3-205ENST00000463688 TLR7Q9NYK1 1049 aaKnown RBP16.27■□□□□ 0.19
COMMD3-205ENST00000463688 TRIM17Q9Y577 477 aa16.27■□□□□ 0.19
COMMD3-205ENST00000463688 A0A0G2JLL6 359 aaPredicted RBP16.26■□□□□ 0.19
COMMD3-205ENST00000463688 USP17L5A8MUK1 530 aa16.26■□□□□ 0.19
COMMD3-205ENST00000463688 ERC2O15083 957 aa16.26■□□□□ 0.19
COMMD3-205ENST00000463688 CAP2P40123 477 aa16.26■□□□□ 0.19
COMMD3-205ENST00000463688 RRP1P56182 461 aaKnown RBP16.26■□□□□ 0.19
COMMD3-205ENST00000463688 SH3BP5LQ7L8J4 393 aa16.26■□□□□ 0.19
COMMD3-205ENST00000463688 PRRT2Q7Z6L0 340 aaPredicted RBP16.26■□□□□ 0.19
COMMD3-205ENST00000463688 ZNF280CQ8ND82 737 aa16.26■□□□□ 0.19
COMMD3-205ENST00000463688 ECHDC1Q9NTX5 307 aa16.26■□□□□ 0.19
COMMD3-205ENST00000463688 AFG3L2Q9Y4W6 797 aa16.26■□□□□ 0.19
COMMD3-205ENST00000463688 FLT1P17948 1338 aa16.26■□□□□ 0.19
COMMD3-205ENST00000463688 PDHXO00330 501 aa16.25■□□□□ 0.19
COMMD3-205ENST00000463688 METTL16Q86W50 562 aaKnown RBP16.25■□□□□ 0.19
COMMD3-205ENST00000463688 PROCA1Q8NCQ7 364 aaPredicted RBP16.25■□□□□ 0.19
COMMD3-205ENST00000463688 DNAJC2Q99543 621 aaKnown RBP16.25■□□□□ 0.19
COMMD3-205ENST00000463688 HAUS7Q99871 368 aa16.25■□□□□ 0.19
COMMD3-205ENST00000463688 EHD4Q9H223 541 aa16.25■□□□□ 0.19
COMMD3-205ENST00000463688 PAG1Q9NWQ8 432 aa16.25■□□□□ 0.19
COMMD3-205ENST00000463688 HPS5Q9UPZ3 1129 aa16.25■□□□□ 0.19
COMMD3-205ENST00000463688 MYH2Q9UKX2 1941 aa16.24■□□□□ 0.19
COMMD3-205ENST00000463688 C19orf81C9J6K1 198 aa16.24■□□□□ 0.19
COMMD3-205ENST00000463688 GOLIM4O00461 696 aa16.24■□□□□ 0.19
COMMD3-205ENST00000463688 RGS19P49795 217 aa16.24■□□□□ 0.19
COMMD3-205ENST00000463688 OTOP1Q7RTM1 612 aa16.24■□□□□ 0.19
COMMD3-205ENST00000463688 MAPKAPK5Q8IW41 473 aa16.24■□□□□ 0.19
COMMD3-205ENST00000463688 FAM43AQ8N2R8 423 aa16.24■□□□□ 0.19
COMMD3-205ENST00000463688 GTF3C2Q8WUA4 911 aaPredicted RBP16.24■□□□□ 0.19
COMMD3-205ENST00000463688 TMOD4Q9NZQ9 345 aa16.24■□□□□ 0.19
COMMD3-205ENST00000463688 SERPINB13Q9UIV8 391 aa16.24■□□□□ 0.19
COMMD3-205ENST00000463688 CASP8AP2Q9UKL3 1982 aa16.23■□□□□ 0.19
COMMD3-205ENST00000463688 ZFYP08048 801 aaPredicted RBP16.23■□□□□ 0.19
COMMD3-205ENST00000463688 OSBPP22059 807 aa16.23■□□□□ 0.19
COMMD3-205ENST00000463688 MLLT1Q03111 559 aaPredicted RBP16.23■□□□□ 0.19
COMMD3-205ENST00000463688 UBE3CQ15386 1083 aa16.23■□□□□ 0.19
COMMD3-205ENST00000463688 C20orf194Q5TEA3 1177 aa16.23■□□□□ 0.19
COMMD3-205ENST00000463688 SMCR8Q8TEV9 937 aaPredicted RBP16.23■□□□□ 0.19
COMMD3-205ENST00000463688 WDR18Q9BV38 432 aa16.23■□□□□ 0.19
COMMD3-205ENST00000463688 CABP5Q9NP86 173 aa16.23■□□□□ 0.19
COMMD3-205ENST00000463688 POLR3DP05423 398 aaPredicted RBP16.22■□□□□ 0.19
COMMD3-205ENST00000463688 PDE6AP16499 860 aa16.22■□□□□ 0.19
COMMD3-205ENST00000463688 CAPN2P17655 700 aa16.22■□□□□ 0.19
COMMD3-205ENST00000463688 GCLCP48506 637 aaPredicted RBP16.22■□□□□ 0.19
COMMD3-205ENST00000463688 GADL1Q6ZQY3 521 aa16.22■□□□□ 0.19
COMMD3-205ENST00000463688 BOLA2Q9H3K6 86 aa16.22■□□□□ 0.19
COMMD3-205ENST00000463688 ATP8A2Q9NTI2 1148 aa16.22■□□□□ 0.19
COMMD3-205ENST00000463688 AGTPBP1Q9UPW5 1226 aa16.22■□□□□ 0.19
COMMD3-205ENST00000463688 C17orf99Q6UX52 265 aa16.21■□□□□ 0.19
COMMD3-205ENST00000463688 TICAM2Q86XR7 235 aa16.21■□□□□ 0.19
COMMD3-205ENST00000463688 MIGA1Q8NAN2 632 aa16.21■□□□□ 0.19
COMMD3-205ENST00000463688 CD99L2Q8TCZ2 262 aa16.21■□□□□ 0.19
COMMD3-205ENST00000463688 GCC1Q96CN9 775 aa16.21■□□□□ 0.19
COMMD3-205ENST00000463688 SWAP70Q9UH65 585 aa16.21■□□□□ 0.19
COMMD3-205ENST00000463688 PTPN22Q9Y2R2 807 aa16.21■□□□□ 0.19
COMMD3-205ENST00000463688 TTC41PQ6P2S7 1318 aa16.21■□□□□ 0.19
COMMD3-205ENST00000463688 AK9Q5TCS8 1911 aa16.21■□□□□ 0.19
COMMD3-205ENST00000463688 TRIM75PA6NK02 468 aa16.2■□□□□ 0.18
COMMD3-205ENST00000463688 USP14P54578 494 aa16.2■□□□□ 0.18
COMMD3-205ENST00000463688 FCGRTP55899 365 aa16.2■□□□□ 0.18
COMMD3-205ENST00000463688 LACTBP83111 547 aaPredicted RBP16.2■□□□□ 0.18
COMMD3-205ENST00000463688 BCL11AQ9H165 835 aa16.2■□□□□ 0.18
COMMD3-205ENST00000463688 R3HDMLQ9H3Y0 253 aa16.2■□□□□ 0.18
COMMD3-205ENST00000463688 ANTXR1Q9H6X2 564 aa16.2■□□□□ 0.18
COMMD3-205ENST00000463688 PALD1Q9ULE6 856 aa16.2■□□□□ 0.18
COMMD3-205ENST00000463688 ZNF532Q9HCE3 1301 aa16.19■□□□□ 0.18
COMMD3-205ENST00000463688 GLRX3O76003 335 aaKnown RBP16.19■□□□□ 0.18
COMMD3-205ENST00000463688 SPP2Q13103 211 aa16.19■□□□□ 0.18
COMMD3-205ENST00000463688 ZNF287Q9HBT7 754 aa16.19■□□□□ 0.18
COMMD3-205ENST00000463688 USP17L10C9JJH3 530 aa16.19■□□□□ 0.18
COMMD3-205ENST00000463688 FMNL1O95466 1100 aaPredicted RBP16.19■□□□□ 0.18
COMMD3-205ENST00000463688 GNAT2P19087 354 aa16.19■□□□□ 0.18
COMMD3-205ENST00000463688 ADD2P35612 726 aa16.19■□□□□ 0.18
COMMD3-205ENST00000463688 BACE1P56817 501 aa16.19■□□□□ 0.18
COMMD3-205ENST00000463688 CERKLQ49MI3 558 aaPredicted RBP16.19■□□□□ 0.18
COMMD3-205ENST00000463688 SH3D19Q5HYK7 790 aa16.19■□□□□ 0.18
COMMD3-205ENST00000463688 ADGRA1Q86SQ6 560 aa16.19■□□□□ 0.18
COMMD3-205ENST00000463688 YTHDC1Q96MU7 727 aaKnown RBP16.19■□□□□ 0.18
COMMD3-205ENST00000463688 RIOK1Q9BRS2 568 aaKnown RBP16.19■□□□□ 0.18
COMMD3-205ENST00000463688 TMEM106CQ9BVX2 250 aa16.19■□□□□ 0.18
COMMD3-205ENST00000463688 MCM9Q9NXL9 1143 aa16.19■□□□□ 0.18
COMMD3-205ENST00000463688 DYNLL1P63167 89 aaKnown RBP16.18■□□□□ 0.18
COMMD3-205ENST00000463688 HDAC1Q13547 482 aaPredicted RBP16.18■□□□□ 0.18
COMMD3-205ENST00000463688 SLC9C1Q4G0N8 1177 aa16.18■□□□□ 0.18
COMMD3-205ENST00000463688 TATDN1Q6P1N9 297 aa16.18■□□□□ 0.18
COMMD3-205ENST00000463688 RWDD1Q9H446 243 aaPredicted RBP16.18■□□□□ 0.18
COMMD3-205ENST00000463688 SAP30BPQ9UHR5 308 aaKnown RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms