RNA–Protein interactions for RNA: ENST00000463411.1

PDLIM7-206, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 1,015 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-206ENST00000463411 TRIM75PA6NK02 468 aa27.05■■□□□ 1.92
PDLIM7-206ENST00000463411 IDH1O75874 414 aaKnown RBP27.05■■□□□ 1.92
PDLIM7-206ENST00000463411 GPAT2Q6NUI2 795 aa27.05■■□□□ 1.92
PDLIM7-206ENST00000463411 ADGRA1Q86SQ6 560 aa27.05■■□□□ 1.92
PDLIM7-206ENST00000463411 PI4KBQ9UBF8 816 aa27.05■■□□□ 1.92
PDLIM7-206ENST00000463411 ADGRA2Q96PE1 1338 aa27.05■■□□□ 1.92
PDLIM7-206ENST00000463411 CYP7A1P22680 504 aa27.04■■□□□ 1.92
PDLIM7-206ENST00000463411 PRMT2P55345 433 aa27.04■■□□□ 1.92
PDLIM7-206ENST00000463411 CERS3Q8IU89 383 aa27.04■■□□□ 1.92
PDLIM7-206ENST00000463411 MAPKAPK5Q8IW41 473 aa27.04■■□□□ 1.92
PDLIM7-206ENST00000463411 RHPN1Q8TCX5 695 aa27.04■■□□□ 1.92
PDLIM7-206ENST00000463411 TGFBRAP1Q8WUH2 860 aa27.04■■□□□ 1.92
PDLIM7-206ENST00000463411 TRIM34Q9BYJ4 488 aa27.04■■□□□ 1.92
PDLIM7-206ENST00000463411 TBC1D2Q9BYX2 928 aa27.04■■□□□ 1.92
PDLIM7-206ENST00000463411 ARHGAP39Q9C0H5 1083 aa27.04■■□□□ 1.92
PDLIM7-206ENST00000463411 SIPA1L1O43166 1804 aa27.04■■□□□ 1.92
PDLIM7-206ENST00000463411 FLT1P17948 1338 aa27.03■■□□□ 1.92
PDLIM7-206ENST00000463411 KIF1BPQ96EK5 621 aa27.03■■□□□ 1.92
PDLIM7-206ENST00000463411 IL1RAPL2Q9NP60 686 aa27.03■■□□□ 1.92
PDLIM7-206ENST00000463411 SLC45A1Q9Y2W3 748 aa27.03■■□□□ 1.92
PDLIM7-206ENST00000463411 HTTP42858 3142 aa27.03■■□□□ 1.92
PDLIM7-206ENST00000463411 CYP2C8P10632 490 aa27.02■■□□□ 1.92
PDLIM7-206ENST00000463411 CAP2P40123 477 aa27.02■■□□□ 1.92
PDLIM7-206ENST00000463411 MAP3K12Q12852 859 aa27.02■■□□□ 1.92
PDLIM7-206ENST00000463411 TMED8Q6PL24 325 aaPredicted RBP27.02■■□□□ 1.92
PDLIM7-206ENST00000463411 CLASRPQ8N2M8 674 aaKnown RBP27.02■■□□□ 1.92
PDLIM7-206ENST00000463411 ZBTB40Q9NUA8 1239 aa27.02■■□□□ 1.92
PDLIM7-206ENST00000463411 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.02■■□□□ 1.92
PDLIM7-206ENST00000463411 TNRC18O15417 2968 aaPredicted RBP27.01■■□□□ 1.91
PDLIM7-206ENST00000463411 ECM2O94769 699 aaPredicted RBP27.01■■□□□ 1.91
PDLIM7-206ENST00000463411 HOXD10P28358 340 aa27.01■■□□□ 1.91
PDLIM7-206ENST00000463411 PSMC4P43686 418 aa27.01■■□□□ 1.91
PDLIM7-206ENST00000463411 CRACR2BQ8N4Y2 399 aaPredicted RBP27.01■■□□□ 1.91
PDLIM7-206ENST00000463411 ZNF333Q96JL9 665 aa27.01■■□□□ 1.91
PDLIM7-206ENST00000463411 TMEM106CQ9BVX2 250 aa27.01■■□□□ 1.91
PDLIM7-206ENST00000463411 LOC285556D6RIA3 1793 aa27.01■■□□□ 1.91
PDLIM7-206ENST00000463411 PDE4DIPQ5VU43 2346 aa27.01■■□□□ 1.91
PDLIM7-206ENST00000463411 APBB1O00213 710 aa27■■□□□ 1.91
PDLIM7-206ENST00000463411 FMNL1O95466 1100 aaPredicted RBP27■■□□□ 1.91
PDLIM7-206ENST00000463411 CCDC84Q86UT8 332 aaPredicted RBP27■■□□□ 1.91
PDLIM7-206ENST00000463411 MAGEB6Q8N7X4 407 aa27■■□□□ 1.91
PDLIM7-206ENST00000463411 SMCR8Q8TEV9 937 aaPredicted RBP27■■□□□ 1.91
PDLIM7-206ENST00000463411 AS3MTQ9HBK9 375 aa27■■□□□ 1.91
PDLIM7-206ENST00000463411 MGAMO43451 1857 aa27■■□□□ 1.91
PDLIM7-206ENST00000463411 HLA-DOAP06340 250 aa26.99■■□□□ 1.91
PDLIM7-206ENST00000463411 ZNF280CQ8ND82 737 aa26.99■■□□□ 1.91
PDLIM7-206ENST00000463411 AGTPBP1Q9UPW5 1226 aa26.99■■□□□ 1.91
PDLIM7-206ENST00000463411 NDUFB9Q9Y6M9 179 aa26.99■■□□□ 1.91
PDLIM7-206ENST00000463411 MYH1P12882 1939 aa26.98■■□□□ 1.91
PDLIM7-206ENST00000463411 POTEFA5A3E0 1075 aa26.98■■□□□ 1.91
PDLIM7-206ENST00000463411 USP17L5A8MUK1 530 aa26.98■■□□□ 1.91
PDLIM7-206ENST00000463411 RAB11FIP3O75154 756 aa26.98■■□□□ 1.91
PDLIM7-206ENST00000463411 IFIT2P09913 472 aaKnown RBP26.98■■□□□ 1.91
PDLIM7-206ENST00000463411 BCRP11274 1271 aa26.98■■□□□ 1.91
PDLIM7-206ENST00000463411 DYNLL1P63167 89 aaKnown RBP26.98■■□□□ 1.91
PDLIM7-206ENST00000463411 TTF1Q15361 905 aaPredicted RBP26.98■■□□□ 1.91
PDLIM7-206ENST00000463411 FOXP4Q8IVH2 680 aaPredicted RBP26.98■■□□□ 1.91
PDLIM7-206ENST00000463411 PROCA1Q8NCQ7 364 aaPredicted RBP26.98■■□□□ 1.91
PDLIM7-206ENST00000463411 TRIM47Q96LD4 638 aa26.98■■□□□ 1.91
PDLIM7-206ENST00000463411 PNMA3Q9UL41 463 aa26.98■■□□□ 1.91
PDLIM7-206ENST00000463411 FCGRTP55899 365 aa26.97■■□□□ 1.91
PDLIM7-206ENST00000463411 SPP2Q13103 211 aa26.97■■□□□ 1.91
PDLIM7-206ENST00000463411 MIGA1Q8NAN2 632 aa26.97■■□□□ 1.91
PDLIM7-206ENST00000463411 ANTXR1Q9H6X2 564 aa26.97■■□□□ 1.91
PDLIM7-206ENST00000463411 SRRDQ9UH36 339 aa26.97■■□□□ 1.91
PDLIM7-206ENST00000463411 SAP30BPQ9UHR5 308 aaKnown RBP26.97■■□□□ 1.91
PDLIM7-206ENST00000463411 PALD1Q9ULE6 856 aa26.97■■□□□ 1.91
PDLIM7-206ENST00000463411 CENPBP07199 599 aaPredicted RBP26.96■■□□□ 1.91
PDLIM7-206ENST00000463411 USP5P45974 858 aa26.96■■□□□ 1.91
PDLIM7-206ENST00000463411 MYPNQ86TC9 1320 aa26.95■■□□□ 1.91
PDLIM7-206ENST00000463411 ASNSP08243 561 aa26.95■■□□□ 1.9
PDLIM7-206ENST00000463411 OSBPP22059 807 aa26.95■■□□□ 1.9
PDLIM7-206ENST00000463411 CTGFP29279 349 aa26.95■■□□□ 1.9
PDLIM7-206ENST00000463411 PABPC4Q13310 644 aaKnown RBP eCLIP26.95■■□□□ 1.9
PDLIM7-206ENST00000463411 PDE3AQ14432 1141 aa26.95■■□□□ 1.9
PDLIM7-206ENST00000463411 SLC4A8Q2Y0W8 1093 aa26.95■■□□□ 1.9
PDLIM7-206ENST00000463411 SIRT2Q8IXJ6 389 aa26.95■■□□□ 1.9
PDLIM7-206ENST00000463411 RAET1EQ8TD07 263 aa26.95■■□□□ 1.9
PDLIM7-206ENST00000463411 SH3TC2Q8TF17 1288 aa26.95■■□□□ 1.9
PDLIM7-206ENST00000463411 BCL11AQ9H165 835 aa26.95■■□□□ 1.9
PDLIM7-206ENST00000463411 RRP1BQ14684 758 aaKnown RBP26.94■■□□□ 1.9
PDLIM7-206ENST00000463411 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.94■■□□□ 1.9
PDLIM7-206ENST00000463411 HMGCS2P54868 508 aa26.93■■□□□ 1.9
PDLIM7-206ENST00000463411 TREML2Q5T2D2 321 aa26.93■■□□□ 1.9
PDLIM7-206ENST00000463411 METTL16Q86W50 562 aaKnown RBP26.93■■□□□ 1.9
PDLIM7-206ENST00000463411 DNAJC2Q99543 621 aaKnown RBP26.93■■□□□ 1.9
PDLIM7-206ENST00000463411 DNAJC18Q9H819 358 aa26.93■■□□□ 1.9
PDLIM7-206ENST00000463411 GINM1Q9NU53 330 aa26.93■■□□□ 1.9
PDLIM7-206ENST00000463411 NAV1Q8NEY1 1877 aa26.92■■□□□ 1.9
PDLIM7-206ENST00000463411 PRPF38BQ5VTL8 546 aaKnown RBP26.92■■□□□ 1.9
PDLIM7-206ENST00000463411 KIAA0100Q14667 2235 aaKnown RBP26.92■■□□□ 1.9
PDLIM7-206ENST00000463411 MYCP01106 439 aaPredicted RBP26.91■■□□□ 1.9
PDLIM7-206ENST00000463411 WDR18Q9BV38 432 aa26.91■■□□□ 1.9
PDLIM7-206ENST00000463411 TMOD4Q9NZQ9 345 aa26.91■■□□□ 1.9
PDLIM7-206ENST00000463411 CENPFP49454 3210 aa26.91■■□□□ 1.9
PDLIM7-206ENST00000463411 GOLIM4O00461 696 aa26.9■■□□□ 1.9
PDLIM7-206ENST00000463411 EN2P19622 333 aaPredicted RBP26.9■■□□□ 1.9
PDLIM7-206ENST00000463411 GRK4P32298 578 aa26.9■■□□□ 1.9
PDLIM7-206ENST00000463411 SH3D19Q5HYK7 790 aa26.9■■□□□ 1.9
PDLIM7-206ENST00000463411 ZBTB21Q9ULJ3 1066 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms