RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 PRRT2Q7Z6L0 340 aaPredicted RBP8.88□□□□□ -0.99
PTPRF-210ENST00000463041 METTL16Q86W50 562 aaKnown RBP8.88□□□□□ -0.99
PTPRF-210ENST00000463041 SIRT2Q8IXJ6 389 aa8.88□□□□□ -0.99
PTPRF-210ENST00000463041 TGFBRAP1Q8WUH2 860 aa8.88□□□□□ -0.99
PTPRF-210ENST00000463041 PIH1D3Q9NQM4 214 aaKnown RBP8.88□□□□□ -0.99
PTPRF-210ENST00000463041 TLR7Q9NYK1 1049 aaKnown RBP8.88□□□□□ -0.99
PTPRF-210ENST00000463041 SLC45A1Q9Y2W3 748 aa8.88□□□□□ -0.99
PTPRF-210ENST00000463041 COL2A1P02458 1487 aaPredicted RBP8.88□□□□□ -0.99
PTPRF-210ENST00000463041 PHIPQ8WWQ0 1821 aa8.87□□□□□ -0.99
PTPRF-210ENST00000463041 USP17L5A8MUK1 530 aa8.87□□□□□ -0.99
PTPRF-210ENST00000463041 IDH1O75874 414 aaKnown RBP8.87□□□□□ -0.99
PTPRF-210ENST00000463041 IFIT2P09913 472 aaKnown RBP8.87□□□□□ -0.99
PTPRF-210ENST00000463041 SLURP2P0DP57 97 aa8.87□□□□□ -0.99
PTPRF-210ENST00000463041 CAP2P40123 477 aa8.87□□□□□ -0.99
PTPRF-210ENST00000463041 CAP1Q01518 475 aa8.87□□□□□ -0.99
PTPRF-210ENST00000463041 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.87□□□□□ -0.99
PTPRF-210ENST00000463041 ARMC5Q96C12 935 aa8.87□□□□□ -0.99
PTPRF-210ENST00000463041 PARK7Q99497 189 aaKnown RBP8.87□□□□□ -0.99
PTPRF-210ENST00000463041 IL1RAPL2Q9NP60 686 aa8.87□□□□□ -0.99
PTPRF-210ENST00000463041 GINM1Q9NU53 330 aa8.87□□□□□ -0.99
PTPRF-210ENST00000463041 CPA4Q9UI42 421 aa8.87□□□□□ -0.99
PTPRF-210ENST00000463041 PTPRFP10586 1907 aa8.87□□□□□ -0.99
PTPRF-210ENST00000463041 CDK5RAP2Q96SN8 1893 aa8.87□□□□□ -0.99
PTPRF-210ENST00000463041 MYH1P12882 1939 aa8.86□□□□□ -0.99
PTPRF-210ENST00000463041 DOCK1Q14185 1865 aa8.86□□□□□ -0.99
PTPRF-210ENST00000463041 PSMC4P43686 418 aa8.86□□□□□ -0.99
PTPRF-210ENST00000463041 DYNLL1P63167 89 aaKnown RBP8.86□□□□□ -0.99
PTPRF-210ENST00000463041 SPP2Q13103 211 aa8.86□□□□□ -0.99
PTPRF-210ENST00000463041 GADL1Q6ZQY3 521 aa8.86□□□□□ -0.99
PTPRF-210ENST00000463041 ADGRA1Q86SQ6 560 aa8.86□□□□□ -0.99
PTPRF-210ENST00000463041 MAPKAPK5Q8IW41 473 aa8.86□□□□□ -0.99
PTPRF-210ENST00000463041 MAGEB6Q8N7X4 407 aa8.86□□□□□ -0.99
PTPRF-210ENST00000463041 PROCA1Q8NCQ7 364 aaPredicted RBP8.86□□□□□ -0.99
PTPRF-210ENST00000463041 ZNF280CQ8ND82 737 aa8.86□□□□□ -0.99
PTPRF-210ENST00000463041 ANTXR1Q9H6X2 564 aa8.86□□□□□ -0.99
PTPRF-210ENST00000463041 AS3MTQ9HBK9 375 aa8.86□□□□□ -0.99
PTPRF-210ENST00000463041 FOCADQ5VW36 1801 aa8.86□□□□□ -0.99
PTPRF-210ENST00000463041 FLT1P17948 1338 aa8.85□□□□□ -0.99
PTPRF-210ENST00000463041 TRIM75PA6NK02 468 aa8.85□□□□□ -0.99
PTPRF-210ENST00000463041 FAM196BA6NMK8 535 aa8.85□□□□□ -0.99
PTPRF-210ENST00000463041 APBB1O00213 710 aa8.85□□□□□ -0.99
PTPRF-210ENST00000463041 FMNL1O95466 1100 aaPredicted RBP8.85□□□□□ -0.99
PTPRF-210ENST00000463041 HLA-DOAP06340 250 aa8.85□□□□□ -0.99
PTPRF-210ENST00000463041 ASNSP08243 561 aa8.85□□□□□ -0.99
PTPRF-210ENST00000463041 BCRP11274 1271 aa8.85□□□□□ -0.99
PTPRF-210ENST00000463041 USP5P45974 858 aa8.85□□□□□ -0.99
PTPRF-210ENST00000463041 PABPC4Q13310 644 aaKnown RBP eCLIP8.85□□□□□ -0.99
PTPRF-210ENST00000463041 SLC9C1Q4G0N8 1177 aa8.85□□□□□ -0.99
PTPRF-210ENST00000463041 SH3D19Q5HYK7 790 aa8.85□□□□□ -0.99
PTPRF-210ENST00000463041 CRACR2BQ8N4Y2 399 aaPredicted RBP8.85□□□□□ -0.99
PTPRF-210ENST00000463041 WDR18Q9BV38 432 aa8.85□□□□□ -0.99
PTPRF-210ENST00000463041 TMEM106CQ9BVX2 250 aa8.85□□□□□ -0.99
PTPRF-210ENST00000463041 TRIM34Q9BYJ4 488 aa8.85□□□□□ -0.99
PTPRF-210ENST00000463041 SRRDQ9UH36 339 aa8.85□□□□□ -0.99
PTPRF-210ENST00000463041 PNMA3Q9UL41 463 aa8.85□□□□□ -0.99
PTPRF-210ENST00000463041 PALD1Q9ULE6 856 aa8.85□□□□□ -0.99
PTPRF-210ENST00000463041 AGTPBP1Q9UPW5 1226 aa8.85□□□□□ -0.99
PTPRF-210ENST00000463041 PTCH2Q9Y6C5 1203 aa8.85□□□□□ -0.99
PTPRF-210ENST00000463041 MKI67P46013 3256 aaKnown RBP8.85□□□□□ -0.99
PTPRF-210ENST00000463041 MGAMO43451 1857 aa8.85□□□□□ -0.99
PTPRF-210ENST00000463041 ATAD5Q96QE3 1844 aa8.84□□□□□ -0.99
PTPRF-210ENST00000463041 ADGRA2Q96PE1 1338 aa8.84□□□□□ -0.99
PTPRF-210ENST00000463041 C19orf81C9J6K1 198 aa8.84□□□□□ -0.99
PTPRF-210ENST00000463041 CYP2C8P10632 490 aa8.84□□□□□ -0.99
PTPRF-210ENST00000463041 ATP5JP18859 108 aa8.84□□□□□ -0.99
PTPRF-210ENST00000463041 RRP1BQ14684 758 aaKnown RBP8.84□□□□□ -0.99
PTPRF-210ENST00000463041 SLC9C2Q5TAH2 1124 aa8.84□□□□□ -0.99
PTPRF-210ENST00000463041 C20orf194Q5TEA3 1177 aa8.84□□□□□ -0.99
PTPRF-210ENST00000463041 TTC6Q86TZ1 520 aa8.84□□□□□ -0.99
PTPRF-210ENST00000463041 ZNF333Q96JL9 665 aa8.84□□□□□ -0.99
PTPRF-210ENST00000463041 TRIM47Q96LD4 638 aa8.84□□□□□ -0.99
PTPRF-210ENST00000463041 ARHGAP39Q9C0H5 1083 aa8.84□□□□□ -0.99
PTPRF-210ENST00000463041 NDUFB9Q9Y6M9 179 aa8.84□□□□□ -0.99
PTPRF-210ENST00000463041 MAST2Q6P0Q8 1798 aa8.84□□□□□ -1
PTPRF-210ENST00000463041 MAGEB6P1A0A0J9YX57 407 aa8.83□□□□□ -1
PTPRF-210ENST00000463041 POTEFA5A3E0 1075 aa8.83□□□□□ -1
PTPRF-210ENST00000463041 GOLIM4O00461 696 aa8.83□□□□□ -1
PTPRF-210ENST00000463041 OSBPP22059 807 aa8.83□□□□□ -1
PTPRF-210ENST00000463041 GCLCP48506 637 aaPredicted RBP8.83□□□□□ -1
PTPRF-210ENST00000463041 FCGRTP55899 365 aa8.83□□□□□ -1
PTPRF-210ENST00000463041 BACE1P56817 501 aa8.83□□□□□ -1
PTPRF-210ENST00000463041 TATDN1Q6P1N9 297 aa8.83□□□□□ -1
PTPRF-210ENST00000463041 CCDC84Q86UT8 332 aaPredicted RBP8.83□□□□□ -1
PTPRF-210ENST00000463041 MIGA1Q8NAN2 632 aa8.83□□□□□ -1
PTPRF-210ENST00000463041 RAET1EQ8TD07 263 aa8.83□□□□□ -1
PTPRF-210ENST00000463041 SMCR8Q8TEV9 937 aaPredicted RBP8.83□□□□□ -1
PTPRF-210ENST00000463041 RIOK1Q9BRS2 568 aaKnown RBP8.83□□□□□ -1
PTPRF-210ENST00000463041 LRRCC1Q9C099 1032 aa8.83□□□□□ -1
PTPRF-210ENST00000463041 EHD4Q9H223 541 aa8.83□□□□□ -1
PTPRF-210ENST00000463041 DCTPP1Q9H773 170 aa8.83□□□□□ -1
PTPRF-210ENST00000463041 SAP30BPQ9UHR5 308 aaKnown RBP8.83□□□□□ -1
PTPRF-210ENST00000463041 SERPINB13Q9UIV8 391 aa8.83□□□□□ -1
PTPRF-210ENST00000463041 BRCA2P51587 3418 aa8.82□□□□□ -1
PTPRF-210ENST00000463041 USP17L10C9JJH3 530 aa8.82□□□□□ -1
PTPRF-210ENST00000463041 POLR3DP05423 398 aaPredicted RBP8.82□□□□□ -1
PTPRF-210ENST00000463041 PDE6AP16499 860 aa8.82□□□□□ -1
PTPRF-210ENST00000463041 CTGFP29279 349 aa8.82□□□□□ -1
PTPRF-210ENST00000463041 HOXA7P31268 230 aaPredicted RBP8.82□□□□□ -1
PTPRF-210ENST00000463041 GRK4P32298 578 aa8.82□□□□□ -1
PTPRF-210ENST00000463041 HMGCS2P54868 508 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms