RNA–Protein interactions for RNA: ENST00000462862.1

ERCC4-203, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 3

Gene ERCC4, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-203ENST00000462862 COL5A3P25940 1745 aaPredicted RBP4.88□□□□□ -1.63
ERCC4-203ENST00000462862 ARAP2Q8WZ64 1704 aa4.88□□□□□ -1.63
ERCC4-203ENST00000462862 A0A0D9SFI3 127 aa4.87□□□□□ -1.63
ERCC4-203ENST00000462862 STX6O43752 255 aa4.87□□□□□ -1.63
ERCC4-203ENST00000462862 CDKL5O76039 1030 aa4.87□□□□□ -1.63
ERCC4-203ENST00000462862 CAVIN2O95810 425 aa4.87□□□□□ -1.63
ERCC4-203ENST00000462862 ZSCAN22P10073 491 aaPredicted RBP4.87□□□□□ -1.63
ERCC4-203ENST00000462862 TIMP2P16035 220 aa4.87□□□□□ -1.63
ERCC4-203ENST00000462862 VEGFBP49765 207 aa4.87□□□□□ -1.63
ERCC4-203ENST00000462862 WDR4P57081 412 aaKnown RBP4.87□□□□□ -1.63
ERCC4-203ENST00000462862 EVCP57679 992 aa4.87□□□□□ -1.63
ERCC4-203ENST00000462862 TRDNQ13061 729 aa4.87□□□□□ -1.63
ERCC4-203ENST00000462862 SCARF1Q14162 830 aa4.87□□□□□ -1.63
ERCC4-203ENST00000462862 AGERQ15109 404 aa4.87□□□□□ -1.63
ERCC4-203ENST00000462862 CAVIN4Q5BKX8 364 aa4.87□□□□□ -1.63
ERCC4-203ENST00000462862 CPLX2Q6PUV4 134 aaKnown RBP4.87□□□□□ -1.63
ERCC4-203ENST00000462862 FAM196AQ6ZSG2 479 aa4.87□□□□□ -1.63
ERCC4-203ENST00000462862 ANKRD18AQ8IVF6 992 aa4.87□□□□□ -1.63
ERCC4-203ENST00000462862 TMTC2Q8N394 836 aa4.87□□□□□ -1.63
ERCC4-203ENST00000462862 ZGPATQ8N5A5 531 aaKnown RBP4.87□□□□□ -1.63
ERCC4-203ENST00000462862 FAM89AQ96GI7 184 aa4.87□□□□□ -1.63
ERCC4-203ENST00000462862 GJD4Q96KN9 370 aaPredicted RBP4.87□□□□□ -1.63
ERCC4-203ENST00000462862 CDK15Q96Q40 435 aa4.87□□□□□ -1.63
ERCC4-203ENST00000462862 SLC4A9Q96Q91 983 aa4.87□□□□□ -1.63
ERCC4-203ENST00000462862 SCAND2PQ9GZW5 306 aaPredicted RBP4.87□□□□□ -1.63
ERCC4-203ENST00000462862 RNF41Q9H4P4 317 aaPredicted RBP4.87□□□□□ -1.63
ERCC4-203ENST00000462862 TLR7Q9NYK1 1049 aaKnown RBP4.87□□□□□ -1.63
ERCC4-203ENST00000462862 LIMD1Q9UGP4 676 aa4.87□□□□□ -1.63
ERCC4-203ENST00000462862 PALD1Q9ULE6 856 aa4.87□□□□□ -1.63
ERCC4-203ENST00000462862 NIP7Q9Y221 180 aaKnown RBP eCLIP4.87□□□□□ -1.63
ERCC4-203ENST00000462862 RTCBQ9Y3I0 505 aaKnown RBP4.87□□□□□ -1.63
ERCC4-203ENST00000462862 ZNF330Q9Y3S2 320 aaPredicted RBP4.87□□□□□ -1.63
ERCC4-203ENST00000462862 DDX49Q9Y6V7 483 aaKnown RBP4.87□□□□□ -1.63
ERCC4-203ENST00000462862 ZNF804BA4D1E1 1349 aa4.87□□□□□ -1.63
ERCC4-203ENST00000462862 UBN2Q6ZU65 1347 aa4.87□□□□□ -1.63
ERCC4-203ENST00000462862 PNPLA7Q6ZV29 1317 aa4.87□□□□□ -1.63
ERCC4-203ENST00000462862 NUP98P52948 1817 aa4.86□□□□□ -1.63
ERCC4-203ENST00000462862 FSD2A1L4K1 749 aa4.86□□□□□ -1.63
ERCC4-203ENST00000462862 GOLIM4O00461 696 aa4.86□□□□□ -1.63
ERCC4-203ENST00000462862 ADH1CP00326 375 aa4.86□□□□□ -1.63
ERCC4-203ENST00000462862 HSPD1P10809 573 aaKnown RBP4.86□□□□□ -1.63
ERCC4-203ENST00000462862 MCM5P33992 734 aa4.86□□□□□ -1.63
ERCC4-203ENST00000462862 ADD2P35612 726 aa4.86□□□□□ -1.63
ERCC4-203ENST00000462862 AK2P54819 239 aa4.86□□□□□ -1.63
ERCC4-203ENST00000462862 ZNF445P59923 1031 aa4.86□□□□□ -1.63
ERCC4-203ENST00000462862 UBE2HP62256 183 aa4.86□□□□□ -1.63
ERCC4-203ENST00000462862 KRT85P78386 507 aa4.86□□□□□ -1.63
ERCC4-203ENST00000462862 FGD1P98174 961 aa4.86□□□□□ -1.63
ERCC4-203ENST00000462862 PTH1RQ03431 593 aa4.86□□□□□ -1.63
ERCC4-203ENST00000462862 SART3Q15020 963 aaKnown RBP4.86□□□□□ -1.63
ERCC4-203ENST00000462862 HLFQ16534 295 aa4.86□□□□□ -1.63
ERCC4-203ENST00000462862 LRRC24Q50LG9 513 aa4.86□□□□□ -1.63
ERCC4-203ENST00000462862 MEX3CQ5U5Q3 659 aaKnown RBP4.86□□□□□ -1.63
ERCC4-203ENST00000462862 MYSM1Q5VVJ2 828 aa4.86□□□□□ -1.63
ERCC4-203ENST00000462862 CCDC102BQ68D86 513 aa4.86□□□□□ -1.63
ERCC4-203ENST00000462862 NAA16Q6N069 864 aaPredicted RBP4.86□□□□□ -1.63
ERCC4-203ENST00000462862 MRPL14Q6P1L8 145 aaKnown RBP4.86□□□□□ -1.63
ERCC4-203ENST00000462862 RALYLQ86SE5 291 aaKnown RBP4.86□□□□□ -1.63
ERCC4-203ENST00000462862 NPAS3Q8IXF0 933 aa4.86□□□□□ -1.63
ERCC4-203ENST00000462862 FAM177A1Q8N128 213 aaPredicted RBP4.86□□□□□ -1.63
ERCC4-203ENST00000462862 FLAD1Q8NFF5 587 aa4.86□□□□□ -1.63
ERCC4-203ENST00000462862 NCOA7Q8NI08 942 aa4.86□□□□□ -1.63
ERCC4-203ENST00000462862 KLHDC4Q8TBB5 520 aa4.86□□□□□ -1.63
ERCC4-203ENST00000462862 TMEM87BQ96K49 555 aa4.86□□□□□ -1.63
ERCC4-203ENST00000462862 FAM227BQ96M60 508 aa4.86□□□□□ -1.63
ERCC4-203ENST00000462862 C8orf37Q96NL8 207 aa4.86□□□□□ -1.63
ERCC4-203ENST00000462862 NLRP3Q96P20 1036 aa4.86□□□□□ -1.63
ERCC4-203ENST00000462862 PURBQ96QR8 312 aaKnown RBP4.86□□□□□ -1.63
ERCC4-203ENST00000462862 SETDB2Q96T68 719 aa4.86□□□□□ -1.63
ERCC4-203ENST00000462862 NOL10Q9BSC4 688 aaKnown RBP4.86□□□□□ -1.63
ERCC4-203ENST00000462862 KLF16Q9BXK1 252 aaPredicted RBP4.86□□□□□ -1.63
ERCC4-203ENST00000462862 UPF3BQ9BZI7 483 aaKnown RBP4.86□□□□□ -1.63
ERCC4-203ENST00000462862 GREM2Q9H772 168 aa4.86□□□□□ -1.63
ERCC4-203ENST00000462862 SLC24A3Q9HC58 644 aa4.86□□□□□ -1.63
ERCC4-203ENST00000462862 CFAP45Q9UL16 551 aa4.86□□□□□ -1.63
ERCC4-203ENST00000462862 DENND2AQ9ULE3 1009 aa4.86□□□□□ -1.63
ERCC4-203ENST00000462862 NID2Q14112 1375 aa4.86□□□□□ -1.63
ERCC4-203ENST00000462862 COL24A1Q17RW2 1714 aa4.86□□□□□ -1.63
ERCC4-203ENST00000462862 DDX60Q8IY21 1712 aaKnown RBP4.86□□□□□ -1.63
ERCC4-203ENST00000462862 CCDC196A0A1B0GTZ2 297 aa4.85□□□□□ -1.63
ERCC4-203ENST00000462862 ZNF213O14771 459 aa4.85□□□□□ -1.63
ERCC4-203ENST00000462862 GPAA1O43292 621 aa4.85□□□□□ -1.63
ERCC4-203ENST00000462862 PFKFB2O60825 505 aa4.85□□□□□ -1.63
ERCC4-203ENST00000462862 LILRB3O75022 631 aa4.85□□□□□ -1.63
ERCC4-203ENST00000462862 MAP4K4O95819 1239 aaPredicted RBP4.85□□□□□ -1.63
ERCC4-203ENST00000462862 F13A1P00488 732 aa4.85□□□□□ -1.63
ERCC4-203ENST00000462862 GPTP24298 496 aa4.85□□□□□ -1.63
ERCC4-203ENST00000462862 GTF2E1P29083 439 aaPredicted RBP4.85□□□□□ -1.63
ERCC4-203ENST00000462862 GMPRP36959 345 aa4.85□□□□□ -1.63
ERCC4-203ENST00000462862 LIFRP42702 1097 aa4.85□□□□□ -1.63
ERCC4-203ENST00000462862 PIP4K2AP48426 406 aaPredicted RBP4.85□□□□□ -1.63
ERCC4-203ENST00000462862 TIMM10P62072 90 aa4.85□□□□□ -1.63
ERCC4-203ENST00000462862 FKBP4Q02790 459 aaKnown RBP eCLIP4.85□□□□□ -1.63
ERCC4-203ENST00000462862 ITPK1Q13572 414 aa4.85□□□□□ -1.63
ERCC4-203ENST00000462862 QPCTQ16769 361 aa4.85□□□□□ -1.63
ERCC4-203ENST00000462862 TUSC1Q2TAM9 212 aa4.85□□□□□ -1.63
ERCC4-203ENST00000462862 HS1BP3Q53T59 392 aa4.85□□□□□ -1.63
ERCC4-203ENST00000462862 CCDC178Q5BJE1 867 aa4.85□□□□□ -1.63
ERCC4-203ENST00000462862 C4orf48Q5BLP8 95 aa4.85□□□□□ -1.63
ERCC4-203ENST00000462862 SUSD4Q5VX71 490 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms