RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 BSNDQ8WZ55 320 aa4.08□□□□□ -1.76
SMC4-203ENST00000462668 ZNF512BQ96KM6 892 aaPredicted RBP4.08□□□□□ -1.76
SMC4-203ENST00000462668 FERD3LQ96RJ6 166 aa4.08□□□□□ -1.76
SMC4-203ENST00000462668 CEP89Q96ST8 783 aa4.08□□□□□ -1.76
SMC4-203ENST00000462668 POP1Q99575 1024 aaKnown RBP4.08□□□□□ -1.76
SMC4-203ENST00000462668 SLC13A1Q9BZW2 595 aa4.08□□□□□ -1.76
SMC4-203ENST00000462668 RBSNQ9H1K0 784 aa4.08□□□□□ -1.76
SMC4-203ENST00000462668 CLEC4MQ9H2X3 399 aaPredicted RBP4.08□□□□□ -1.76
SMC4-203ENST00000462668 RNF219Q5W0B1 726 aaPredicted RBP4.08□□□□□ -1.76
SMC4-203ENST00000462668 LLGL2Q6P1M3 1020 aa4.08□□□□□ -1.76
SMC4-203ENST00000462668 ZSCAN1Q8NBB4 408 aa4.08□□□□□ -1.76
SMC4-203ENST00000462668 TTC8Q8TAM2 541 aa4.08□□□□□ -1.76
SMC4-203ENST00000462668 PNISRQ8TF01 805 aaKnown RBP4.08□□□□□ -1.76
SMC4-203ENST00000462668 VWCEQ96DN2 955 aa4.08□□□□□ -1.76
SMC4-203ENST00000462668 SAMM50Q9Y512 469 aa4.08□□□□□ -1.76
SMC4-203ENST00000462668 SHTN1A0MZ66 631 aa4.08□□□□□ -1.76
SMC4-203ENST00000462668 TLR3O15455 904 aaKnown RBP4.08□□□□□ -1.76
SMC4-203ENST00000462668 DGKGP49619 791 aa4.08□□□□□ -1.76
SMC4-203ENST00000462668 PTPN5P54829 565 aa4.08□□□□□ -1.76
SMC4-203ENST00000462668 PIN1Q13526 163 aaPredicted RBP4.08□□□□□ -1.76
SMC4-203ENST00000462668 KIF18BQ86Y91 864 aa4.08□□□□□ -1.76
SMC4-203ENST00000462668 MRGPRX3Q96LB0 322 aa4.08□□□□□ -1.76
SMC4-203ENST00000462668 CEP63Q96MT8 703 aa4.08□□□□□ -1.76
SMC4-203ENST00000462668 SLC30A3Q99726 388 aa4.08□□□□□ -1.76
SMC4-203ENST00000462668 PHF20L1A8MW92 1017 aa4.07□□□□□ -1.76
SMC4-203ENST00000462668 SCGB1D2O95969 90 aa4.07□□□□□ -1.76
SMC4-203ENST00000462668 MTMR1Q13613 665 aa4.07□□□□□ -1.76
SMC4-203ENST00000462668 TMEM95Q3KNT9 176 aa4.07□□□□□ -1.76
SMC4-203ENST00000462668 SULF2Q8IWU5 870 aa4.07□□□□□ -1.76
SMC4-203ENST00000462668 TRIM8Q9BZR9 551 aa4.07□□□□□ -1.76
SMC4-203ENST00000462668 HCSTQ9UBK5 93 aa4.07□□□□□ -1.76
SMC4-203ENST00000462668 PCDHGC4Q9Y5F7 938 aa4.07□□□□□ -1.76
SMC4-203ENST00000462668 IQCA1LA6NCM1 817 aa4.07□□□□□ -1.76
SMC4-203ENST00000462668 AKAP10O43572 662 aa4.07□□□□□ -1.76
SMC4-203ENST00000462668 ESRRAP11474 423 aaPredicted RBP4.07□□□□□ -1.76
SMC4-203ENST00000462668 KCNA6P17658 529 aa4.07□□□□□ -1.76
SMC4-203ENST00000462668 PPP2R5AQ15172 486 aa4.07□□□□□ -1.76
SMC4-203ENST00000462668 LHFPL2Q6ZUX7 228 aa4.07□□□□□ -1.76
SMC4-203ENST00000462668 SCYL1Q96KG9 808 aa4.07□□□□□ -1.76
SMC4-203ENST00000462668 ZNF69Q9UC07 566 aa4.07□□□□□ -1.76
SMC4-203ENST00000462668 HTR3BO95264 441 aa4.07□□□□□ -1.76
SMC4-203ENST00000462668 RARAP10276 462 aa4.07□□□□□ -1.76
SMC4-203ENST00000462668 CAP2P40123 477 aa4.07□□□□□ -1.76
SMC4-203ENST00000462668 PPP2R3AQ06190 1150 aa4.07□□□□□ -1.76
SMC4-203ENST00000462668 PCDH1Q08174 1060 aa4.07□□□□□ -1.76
SMC4-203ENST00000462668 LRRC41Q15345 812 aa4.07□□□□□ -1.76
SMC4-203ENST00000462668 OVOS1Q6IE37 1185 aa4.07□□□□□ -1.76
SMC4-203ENST00000462668 FIGNL1Q6PIW4 674 aa4.07□□□□□ -1.76
SMC4-203ENST00000462668 APBB1IPQ7Z5R6 666 aaPredicted RBP4.07□□□□□ -1.76
SMC4-203ENST00000462668 ATXN2LQ8WWM7 1075 aaKnown RBP4.07□□□□□ -1.76
SMC4-203ENST00000462668 HPS1Q92902 700 aa4.07□□□□□ -1.76
SMC4-203ENST00000462668 GMCL1Q96IK5 515 aa4.07□□□□□ -1.76
SMC4-203ENST00000462668 CRBNQ96SW2 442 aa4.07□□□□□ -1.76
SMC4-203ENST00000462668 SENP7Q9BQF6 1050 aa4.07□□□□□ -1.76
SMC4-203ENST00000462668 RASSF4Q9H2L5 321 aa4.07□□□□□ -1.76
SMC4-203ENST00000462668 COMMD10Q9Y6G5 202 aa4.07□□□□□ -1.76
SMC4-203ENST00000462668 AFF1P51825 1210 aaKnown RBP4.06□□□□□ -1.76
SMC4-203ENST00000462668 TMEM240Q5SV17 173 aa4.06□□□□□ -1.76
SMC4-203ENST00000462668 LARP1BQ659C4 914 aaKnown RBP4.06□□□□□ -1.76
SMC4-203ENST00000462668 MAGEB6Q8N7X4 407 aa4.06□□□□□ -1.76
SMC4-203ENST00000462668 RHOBTB2Q9BYZ6 727 aa4.06□□□□□ -1.76
SMC4-203ENST00000462668 PUS7LQ9H0K6 701 aaKnown RBP4.06□□□□□ -1.76
SMC4-203ENST00000462668 CASS4Q9NQ75 786 aa4.06□□□□□ -1.76
SMC4-203ENST00000462668 FRRS1LQ9P0K9 344 aa4.06□□□□□ -1.76
SMC4-203ENST00000462668 MYCLP1P12525 358 aaPredicted RBP4.06□□□□□ -1.76
SMC4-203ENST00000462668 PURAQ00577 322 aaKnown RBP4.06□□□□□ -1.76
SMC4-203ENST00000462668 AP3B2Q13367 1082 aa4.06□□□□□ -1.76
SMC4-203ENST00000462668 GALEQ14376 348 aa4.06□□□□□ -1.76
SMC4-203ENST00000462668 ZNF697Q5TEC3 545 aa4.06□□□□□ -1.76
SMC4-203ENST00000462668 C11orf96Q7Z7L8 435 aa4.06□□□□□ -1.76
SMC4-203ENST00000462668 PPFIBP1Q86W92 1011 aa4.06□□□□□ -1.76
SMC4-203ENST00000462668 SCUBE1Q8IWY4 988 aa4.06□□□□□ -1.76
SMC4-203ENST00000462668 PPM1KQ8N3J5 372 aa4.06□□□□□ -1.76
SMC4-203ENST00000462668 UBE2Q2Q8WVN8 375 aa4.06□□□□□ -1.76
SMC4-203ENST00000462668 TNFRSF25Q93038 417 aa4.06□□□□□ -1.76
SMC4-203ENST00000462668 OSBP2Q969R2 916 aa4.06□□□□□ -1.76
SMC4-203ENST00000462668 SLC9A7Q96T83 725 aa4.06□□□□□ -1.76
SMC4-203ENST00000462668 MENTQ9BUN1 341 aa4.06□□□□□ -1.76
SMC4-203ENST00000462668 TCEAL9Q9UHQ7 104 aa4.06□□□□□ -1.76
SMC4-203ENST00000462668 PFDN2Q9UHV9 154 aa4.06□□□□□ -1.76
SMC4-203ENST00000462668 ATXN7O15265 892 aaPredicted RBP4.06□□□□□ -1.76
SMC4-203ENST00000462668 NFKB2Q00653 900 aa4.06□□□□□ -1.76
SMC4-203ENST00000462668 BIRC2Q13490 618 aa4.06□□□□□ -1.76
SMC4-203ENST00000462668 ANKRD39Q53RE8 183 aa4.06□□□□□ -1.76
SMC4-203ENST00000462668 BICDL1Q6ZP65 573 aa4.06□□□□□ -1.76
SMC4-203ENST00000462668 LRRTM3Q86VH5 581 aa4.06□□□□□ -1.76
SMC4-203ENST00000462668 CACTIN-AS1Q8N1I8 211 aa4.06□□□□□ -1.76
SMC4-203ENST00000462668 ATP11AP98196 1134 aa4.06□□□□□ -1.76
SMC4-203ENST00000462668 GBX1Q14549 363 aa4.06□□□□□ -1.76
SMC4-203ENST00000462668 SEPT7Q16181 437 aaKnown RBP4.06□□□□□ -1.76
SMC4-203ENST00000462668 KIF4BQ2VIQ3 1234 aa4.06□□□□□ -1.76
SMC4-203ENST00000462668 GK5Q6ZS86 529 aa4.06□□□□□ -1.76
SMC4-203ENST00000462668 FAM43AQ8N2R8 423 aa4.06□□□□□ -1.76
SMC4-203ENST00000462668 GNL3LQ9NVN8 582 aaKnown RBP4.06□□□□□ -1.76
SMC4-203ENST00000462668 TRIM27P14373 513 aa4.05□□□□□ -1.76
SMC4-203ENST00000462668 CDK8P49336 464 aa4.05□□□□□ -1.76
SMC4-203ENST00000462668 GRIK5Q16478 980 aa4.05□□□□□ -1.76
SMC4-203ENST00000462668 NLRC3Q7RTR2 1065 aa4.05□□□□□ -1.76
SMC4-203ENST00000462668 CHMP4CQ96CF2 233 aa4.05□□□□□ -1.76
SMC4-203ENST00000462668 FAM163AQ96GL9 167 aaPredicted RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms