RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 TBC1D12O60347 775 aa14.1□□□□□ -0.15
CPNE1-221ENST00000462352 IREB2P48200 963 aaKnown RBP14.1□□□□□ -0.15
CPNE1-221ENST00000462352 HUNKP57058 714 aa14.1□□□□□ -0.15
CPNE1-221ENST00000462352 EVX2Q03828 476 aa14.1□□□□□ -0.15
CPNE1-221ENST00000462352 SAPCD2Q86UD0 394 aa14.1□□□□□ -0.15
CPNE1-221ENST00000462352 METTL16Q86W50 562 aaKnown RBP14.1□□□□□ -0.15
CPNE1-221ENST00000462352 FOXP4Q8IVH2 680 aaPredicted RBP14.1□□□□□ -0.15
CPNE1-221ENST00000462352 AMOTL1Q8IY63 956 aa14.1□□□□□ -0.15
CPNE1-221ENST00000462352 KLRG1Q96E93 195 aa14.1□□□□□ -0.15
CPNE1-221ENST00000462352 NAPBQ9H115 298 aa14.1□□□□□ -0.15
CPNE1-221ENST00000462352 EHD4Q9H223 541 aa14.1□□□□□ -0.15
CPNE1-221ENST00000462352 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.1□□□□□ -0.15
CPNE1-221ENST00000462352 HERC5Q9UII4 1024 aaKnown RBP14.1□□□□□ -0.15
CPNE1-221ENST00000462352 ABT1Q9ULW3 272 aaKnown RBP14.1□□□□□ -0.15
CPNE1-221ENST00000462352 SIPA1L1O43166 1804 aa14.1□□□□□ -0.15
CPNE1-221ENST00000462352 BAZ2AQ9UIF9 1905 aaKnown RBP14.09□□□□□ -0.15
CPNE1-221ENST00000462352 CYP2D7A0A087X1C5 515 aa14.09□□□□□ -0.15
CPNE1-221ENST00000462352 HTRA3P83110 453 aa14.09□□□□□ -0.15
CPNE1-221ENST00000462352 SBK1Q52WX2 424 aa14.09□□□□□ -0.15
CPNE1-221ENST00000462352 C12orf60Q5U649 245 aa14.09□□□□□ -0.15
CPNE1-221ENST00000462352 CASC1Q6TDU7 716 aa14.09□□□□□ -0.15
CPNE1-221ENST00000462352 CRACR2BQ8N4Y2 399 aaPredicted RBP14.09□□□□□ -0.15
CPNE1-221ENST00000462352 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.09□□□□□ -0.152e-14■□□□□ 9.9
CPNE1-221ENST00000462352 ESYT1Q9BSJ8 1104 aa14.09□□□□□ -0.15
CPNE1-221ENST00000462352 TRIM34Q9BYJ4 488 aa14.09□□□□□ -0.15
CPNE1-221ENST00000462352 DNAJC18Q9H819 358 aa14.09□□□□□ -0.15
CPNE1-221ENST00000462352 SERPINB13Q9UIV8 391 aa14.09□□□□□ -0.15
CPNE1-221ENST00000462352 PHF20L1A8MW92 1017 aa14.08□□□□□ -0.16
CPNE1-221ENST00000462352 SMIM22K7EJ46 135 aa14.08□□□□□ -0.16
CPNE1-221ENST00000462352 FGAP02671 866 aa14.08□□□□□ -0.16
CPNE1-221ENST00000462352 GABPAQ06546 454 aa14.08□□□□□ -0.16
CPNE1-221ENST00000462352 ALX1Q15699 326 aa14.08□□□□□ -0.16
CPNE1-221ENST00000462352 LDLRAD1Q5T700 205 aa14.08□□□□□ -0.16
CPNE1-221ENST00000462352 ANKRD13AQ8IZ07 590 aa14.08□□□□□ -0.16
CPNE1-221ENST00000462352 WRNIP1Q96S55 665 aa14.08□□□□□ -0.16
CPNE1-221ENST00000462352 DSCC1Q9BVC3 393 aa14.08□□□□□ -0.16
CPNE1-221ENST00000462352 ZNF112Q9UJU3 913 aa14.08□□□□□ -0.16
CPNE1-221ENST00000462352 ZMYM6O95789 1325 aa14.08□□□□□ -0.16
CPNE1-221ENST00000462352 UNCXA6NJT0 531 aa14.07□□□□□ -0.16
CPNE1-221ENST00000462352 MINDY4BA8MYZ0 360 aa14.07□□□□□ -0.16
CPNE1-221ENST00000462352 INPP5BP32019 993 aa14.07□□□□□ -0.16
CPNE1-221ENST00000462352 MAP3K9P80192 1104 aa14.07□□□□□ -0.16
CPNE1-221ENST00000462352 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.07□□□□□ -0.16
CPNE1-221ENST00000462352 ZKSCAN4Q969J2 545 aaPredicted RBP14.07□□□□□ -0.16
CPNE1-221ENST00000462352 DYNLL2Q96FJ2 89 aa14.07□□□□□ -0.16
CPNE1-221ENST00000462352 OTOFQ9HC10 1997 aa14.06□□□□□ -0.16
CPNE1-221ENST00000462352 RASSF10A6NK89 507 aa14.06□□□□□ -0.16
CPNE1-221ENST00000462352 VGLL4Q14135 290 aa14.06□□□□□ -0.16
CPNE1-221ENST00000462352 RRP1BQ14684 758 aaKnown RBP14.06□□□□□ -0.16
CPNE1-221ENST00000462352 DEFB115Q30KQ5 88 aa14.06□□□□□ -0.16
CPNE1-221ENST00000462352 HHIPL1Q96JK4 782 aa14.06□□□□□ -0.16
CPNE1-221ENST00000462352 CLMNQ96JQ2 1002 aa14.06□□□□□ -0.16
CPNE1-221ENST00000462352 ROBO3Q96MS0 1386 aa14.06□□□□□ -0.16
CPNE1-221ENST00000462352 LAMB1P07942 1786 aa14.05□□□□□ -0.16
CPNE1-221ENST00000462352 CTNND1O60716 968 aaKnown RBP14.05□□□□□ -0.16
CPNE1-221ENST00000462352 SHMT1P34896 483 aa14.05□□□□□ -0.16
CPNE1-221ENST00000462352 PTH1RQ03431 593 aa14.05□□□□□ -0.16
CPNE1-221ENST00000462352 PPARAQ07869 468 aa14.05□□□□□ -0.16
CPNE1-221ENST00000462352 RGMBQ6NW40 437 aa14.05□□□□□ -0.16
CPNE1-221ENST00000462352 TATDN1Q6P1N9 297 aa14.05□□□□□ -0.16
CPNE1-221ENST00000462352 C16orf86Q6ZW13 317 aa14.05□□□□□ -0.16
CPNE1-221ENST00000462352 SLC44A5Q8NCS7 719 aa14.05□□□□□ -0.16
CPNE1-221ENST00000462352 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.05□□□□□ -0.16
CPNE1-221ENST00000462352 SWAP70Q9UH65 585 aa14.05□□□□□ -0.16
CPNE1-221ENST00000462352 TAOK2Q9UL54 1235 aa14.05□□□□□ -0.16
CPNE1-221ENST00000462352 CSADQ9Y600 493 aa14.05□□□□□ -0.16
CPNE1-221ENST00000462352 SNCAIPQ9Y6H5 919 aa14.05□□□□□ -0.16
CPNE1-221ENST00000462352 GDF11O95390 407 aa14.04□□□□□ -0.16
CPNE1-221ENST00000462352 CAP2P40123 477 aa14.04□□□□□ -0.16
CPNE1-221ENST00000462352 CDK8P49336 464 aa14.04□□□□□ -0.16
CPNE1-221ENST00000462352 ZNF157P51786 506 aaPredicted RBP14.04□□□□□ -0.16
CPNE1-221ENST00000462352 CTDSPL2Q05D32 466 aa14.04□□□□□ -0.16
CPNE1-221ENST00000462352 NOL9Q5SY16 702 aaKnown RBP14.04□□□□□ -0.16
CPNE1-221ENST00000462352 CYP4F22Q6NT55 531 aa14.04□□□□□ -0.16
CPNE1-221ENST00000462352 KIAA1211Q6ZU35 1233 aa14.04□□□□□ -0.16
CPNE1-221ENST00000462352 PAXIP1Q6ZW49 1069 aaPredicted RBP14.04□□□□□ -0.16
CPNE1-221ENST00000462352 SCYL3Q8IZE3 742 aa14.04□□□□□ -0.16
CPNE1-221ENST00000462352 STK11IPQ8N1F8 1099 aa14.04□□□□□ -0.16
CPNE1-221ENST00000462352 SLC10A4Q96EP9 437 aa14.04□□□□□ -0.16
CPNE1-221ENST00000462352 LSG1Q9H089 658 aaKnown RBP14.04□□□□□ -0.16
CPNE1-221ENST00000462352 ELP3Q9H9T3 547 aa14.04□□□□□ -0.16
CPNE1-221ENST00000462352 ANO2Q9NQ90 1003 aa14.04□□□□□ -0.16
CPNE1-221ENST00000462352 ANAPC4Q9UJX5 808 aa14.04□□□□□ -0.16
CPNE1-221ENST00000462352 HAND2P61296 217 aa14.03□□□□□ -0.16
CPNE1-221ENST00000462352 JAG1P78504 1218 aa14.03□□□□□ -0.16
CPNE1-221ENST00000462352 CERKLQ49MI3 558 aaPredicted RBP14.03□□□□□ -0.16
CPNE1-221ENST00000462352 MAP4K1Q92918 833 aa14.03□□□□□ -0.16
CPNE1-221ENST00000462352 CTNNA3Q9UI47 895 aa14.03□□□□□ -0.16
CPNE1-221ENST00000462352 ZNF213O14771 459 aa14.02□□□□□ -0.17
CPNE1-221ENST00000462352 SLC3A2P08195 630 aaKnown RBP14.02□□□□□ -0.17
CPNE1-221ENST00000462352 SLC10A3P09131 477 aa14.02□□□□□ -0.17
CPNE1-221ENST00000462352 GRM1Q13255 1194 aa14.02□□□□□ -0.17
CPNE1-221ENST00000462352 SHROOM1Q2M3G4 852 aaPredicted RBP14.02□□□□□ -0.17
CPNE1-221ENST00000462352 RASAL3Q86YV0 1011 aa14.02□□□□□ -0.17
CPNE1-221ENST00000462352 CNKSR2Q8WXI2 1034 aa14.02□□□□□ -0.17
CPNE1-221ENST00000462352 NBPF3Q9H094 633 aa14.02□□□□□ -0.17
CPNE1-221ENST00000462352 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.02□□□□□ -0.17
CPNE1-221ENST00000462352 U3KPZ7 1027 aaPredicted RBP14.02□□□□□ -0.17
CPNE1-221ENST00000462352 SPDYE5A6NIY4 337 aa14.01□□□□□ -0.17
CPNE1-221ENST00000462352 FAM155AB1AL88 458 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms