RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-208ENST00000461578 GJD2Q9UKL4 321 aa17.09■□□□□ 0.33
PABPC4-208ENST00000461578 MROH7-TTC4A0A0A0MT08 1334 aa17.09■□□□□ 0.33
PABPC4-208ENST00000461578 ATAD5Q96QE3 1844 aa17.09■□□□□ 0.33
PABPC4-208ENST00000461578 CYP2B6P20813 491 aa17.08■□□□□ 0.32
PABPC4-208ENST00000461578 GCLCP48506 637 aaPredicted RBP17.08■□□□□ 0.32
PABPC4-208ENST00000461578 LRIT3Q3SXY7 679 aa17.08■□□□□ 0.32
PABPC4-208ENST00000461578 ZNF280CQ8ND82 737 aa17.08■□□□□ 0.32
PABPC4-208ENST00000461578 TRIB2Q92519 343 aa17.08■□□□□ 0.32
PABPC4-208ENST00000461578 UBE2OQ9C0C9 1292 aaKnown RBP17.08■□□□□ 0.32
PABPC4-208ENST00000461578 ASCC2Q9H1I8 757 aaPredicted RBP17.08■□□□□ 0.32
PABPC4-208ENST00000461578 FBXO3Q9UK99 471 aa17.08■□□□□ 0.32
PABPC4-208ENST00000461578 STXBP5LQ9Y2K9 1186 aa17.08■□□□□ 0.32
PABPC4-208ENST00000461578 PLXNB2O15031 1838 aa17.07■□□□□ 0.32
PABPC4-208ENST00000461578 PEX10O60683 326 aa17.07■□□□□ 0.32
PABPC4-208ENST00000461578 UBTFL1P0CB47 393 aaPredicted RBP17.07■□□□□ 0.32
PABPC4-208ENST00000461578 IL15P40933 162 aaPredicted RBP17.07■□□□□ 0.32
PABPC4-208ENST00000461578 RHBDL3P58872 404 aa17.07■□□□□ 0.32
PABPC4-208ENST00000461578 TIMM10P62072 90 aa17.07■□□□□ 0.32
PABPC4-208ENST00000461578 PABPC4Q13310 644 aaKnown RBP eCLIP17.07■□□□□ 0.32
PABPC4-208ENST00000461578 FAM163AQ96GL9 167 aaPredicted RBP17.07■□□□□ 0.32
PABPC4-208ENST00000461578 OSBPL5Q9H0X9 879 aaPredicted RBP17.07■□□□□ 0.32
PABPC4-208ENST00000461578 MTMR10Q9NXD2 777 aa17.07■□□□□ 0.32
PABPC4-208ENST00000461578 PFASO15067 1338 aa17.06■□□□□ 0.32
PABPC4-208ENST00000461578 ANP32CO43423 234 aa17.06■□□□□ 0.32
PABPC4-208ENST00000461578 TBC1D12O60347 775 aa17.06■□□□□ 0.32
PABPC4-208ENST00000461578 MECOMQ03112 1051 aa17.06■□□□□ 0.32
PABPC4-208ENST00000461578 RRP1BQ14684 758 aaKnown RBP17.06■□□□□ 0.32
PABPC4-208ENST00000461578 SPTY2D1Q68D10 685 aaPredicted RBP17.06■□□□□ 0.32
PABPC4-208ENST00000461578 ERICH6Q7L0X2 663 aa17.06■□□□□ 0.32
PABPC4-208ENST00000461578 OGDHLQ9ULD0 1010 aa17.06■□□□□ 0.32
PABPC4-208ENST00000461578 CUL9Q8IWT3 2517 aa17.06■□□□□ 0.32
PABPC4-208ENST00000461578 GPR75-ASB3A0A0A6YYF3 556 aa17.05■□□□□ 0.32
PABPC4-208ENST00000461578 PRKAR2AP13861 404 aaKnown RBP17.05■□□□□ 0.32
PABPC4-208ENST00000461578 ZNF521Q96K83 1311 aa17.04■□□□□ 0.32
PABPC4-208ENST00000461578 USP17L5A8MUK1 530 aa17.04■□□□□ 0.32
PABPC4-208ENST00000461578 CAP2P40123 477 aa17.04■□□□□ 0.32
PABPC4-208ENST00000461578 IRX3P78415 501 aaPredicted RBP17.04■□□□□ 0.32
PABPC4-208ENST00000461578 ZNF384Q8TF68 577 aa17.04■□□□□ 0.32
PABPC4-208ENST00000461578 PDS5AQ29RF7 1337 aaKnown RBP17.03■□□□□ 0.32
PABPC4-208ENST00000461578 MDM2Q00987 491 aaPredicted RBP17.03■□□□□ 0.32
PABPC4-208ENST00000461578 MTMR2Q13614 643 aa17.03■□□□□ 0.32
PABPC4-208ENST00000461578 XAGE2Q96GT9 111 aa17.03■□□□□ 0.32
PABPC4-208ENST00000461578 NUDT12Q9BQG2 462 aa17.03■□□□□ 0.32
PABPC4-208ENST00000461578 AS3MTQ9HBK9 375 aa17.03■□□□□ 0.32
PABPC4-208ENST00000461578 MORF4L1Q9UBU8 362 aa17.03■□□□□ 0.32
PABPC4-208ENST00000461578 A0A1B0GUL7 405 aa17.02■□□□□ 0.32
PABPC4-208ENST00000461578 SH3D19Q5HYK7 790 aa17.02■□□□□ 0.32
PABPC4-208ENST00000461578 MAP3K21Q5TCX8 1036 aa17.02■□□□□ 0.32
PABPC4-208ENST00000461578 PI16Q6UXB8 463 aa17.02■□□□□ 0.32
PABPC4-208ENST00000461578 TBC1D9Q6ZT07 1266 aa17.02■□□□□ 0.32
PABPC4-208ENST00000461578 P2RX7Q99572 595 aaKnown RBP17.02■□□□□ 0.32
PABPC4-208ENST00000461578 COL25A1Q9BXS0 654 aaPredicted RBP17.02■□□□□ 0.32
PABPC4-208ENST00000461578 TBC1D2Q9BYX2 928 aa17.02■□□□□ 0.32
PABPC4-208ENST00000461578 TXNRD2Q9NNW7 524 aa17.02■□□□□ 0.32
PABPC4-208ENST00000461578 SMC4Q9NTJ3 1288 aa17.02■□□□□ 0.32
PABPC4-208ENST00000461578 NPM3O75607 178 aaKnown RBP17.01■□□□□ 0.31
PABPC4-208ENST00000461578 ZKSCAN1P17029 563 aaPredicted RBP17.01■□□□□ 0.31
PABPC4-208ENST00000461578 CACNB2Q08289 660 aaPredicted RBP17.01■□□□□ 0.31
PABPC4-208ENST00000461578 TFCP2Q12800 502 aa17.01■□□□□ 0.31
PABPC4-208ENST00000461578 LRRC26Q2I0M4 334 aa17.01■□□□□ 0.31
PABPC4-208ENST00000461578 COPRSQ9NQ92 184 aa17.01■□□□□ 0.31
PABPC4-208ENST00000461578 TMOD4Q9NZQ9 345 aa17.01■□□□□ 0.31
PABPC4-208ENST00000461578 RAI14Q9P0K7 980 aa17.01■□□□□ 0.31
PABPC4-208ENST00000461578 ZBTB22O15209 634 aa17■□□□□ 0.31
PABPC4-208ENST00000461578 LDHCP07864 332 aa17■□□□□ 0.31
PABPC4-208ENST00000461578 CCND3P30281 292 aaPredicted RBP17■□□□□ 0.31
PABPC4-208ENST00000461578 GSTO1P78417 241 aa17■□□□□ 0.31
PABPC4-208ENST00000461578 PDE3AQ14432 1141 aa17■□□□□ 0.31
PABPC4-208ENST00000461578 MVPQ14764 893 aaKnown RBP17■□□□□ 0.31
PABPC4-208ENST00000461578 CCL14Q16627 93 aa17■□□□□ 0.31
PABPC4-208ENST00000461578 TEX11Q8IYF3 940 aa17■□□□□ 0.31
PABPC4-208ENST00000461578 GPRC5AQ8NFJ5 357 aa17■□□□□ 0.31
PABPC4-208ENST00000461578 SOCS4Q8WXH5 440 aa17■□□□□ 0.31
PABPC4-208ENST00000461578 NSUN4Q96CB9 384 aaKnown RBP17■□□□□ 0.31
PABPC4-208ENST00000461578 FAM161BQ96MY7 647 aa17■□□□□ 0.31
PABPC4-208ENST00000461578 NEUROD6Q96NK8 337 aa17■□□□□ 0.31
PABPC4-208ENST00000461578 HMG20BQ9P0W2 317 aa17■□□□□ 0.31
PABPC4-208ENST00000461578 COL2A1P02458 1487 aaPredicted RBP16.99■□□□□ 0.31
PABPC4-208ENST00000461578 COL6A1P12109 1028 aa16.99■□□□□ 0.31
PABPC4-208ENST00000461578 BACE1P56817 501 aa16.99■□□□□ 0.31
PABPC4-208ENST00000461578 HERVK_113P62684 666 aa16.99■□□□□ 0.31
PABPC4-208ENST00000461578 SHROOM1Q2M3G4 852 aaPredicted RBP16.99■□□□□ 0.31
PABPC4-208ENST00000461578 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.99■□□□□ 0.31
PABPC4-208ENST00000461578 CCAR1Q8IX12 1150 aaKnown RBP16.99■□□□□ 0.31
PABPC4-208ENST00000461578 PAGR1Q9BTK6 254 aa16.99■□□□□ 0.31
PABPC4-208ENST00000461578 HERC5Q9UII4 1024 aaKnown RBP16.99■□□□□ 0.31
PABPC4-208ENST00000461578 AKAP2Q9Y2D5 859 aa16.99■□□□□ 0.31
PABPC4-208ENST00000461578 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.99■□□□□ 0.31
PABPC4-208ENST00000461578 UNC80Q8N2C7 3258 aa16.99■□□□□ 0.31
PABPC4-208ENST00000461578 SIPA1L1O43166 1804 aa16.98■□□□□ 0.31
PABPC4-208ENST00000461578 E9PSI1 815 aa16.98■□□□□ 0.31
PABPC4-208ENST00000461578 XRCC5P13010 732 aaKnown RBP16.98■□□□□ 0.31
PABPC4-208ENST00000461578 JAG1P78504 1218 aa16.98■□□□□ 0.31
PABPC4-208ENST00000461578 Q3C1V9 767 aa16.98■□□□□ 0.31
PABPC4-208ENST00000461578 ALDH1L2Q3SY69 923 aa16.98■□□□□ 0.31
PABPC4-208ENST00000461578 GORABQ5T7V8 394 aa16.98■□□□□ 0.31
PABPC4-208ENST00000461578 SPATA5Q8NB90 893 aa16.98■□□□□ 0.31
PABPC4-208ENST00000461578 SH3RF3Q8TEJ3 882 aaPredicted RBP16.98■□□□□ 0.31
PABPC4-208ENST00000461578 MEIS3Q99687 375 aa16.98■□□□□ 0.31
PABPC4-208ENST00000461578 WDR18Q9BV38 432 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms