RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 FIGNL1Q6PIW4 674 aa10.65□□□□□ -0.7
ECHDC1-212ENST00000461239 DEFB132Q7Z7B7 95 aa10.65□□□□□ -0.7
ECHDC1-212ENST00000461239 DACH1Q9UI36 760 aa10.65□□□□□ -0.7
ECHDC1-212ENST00000461239 PCDHGC4Q9Y5F7 938 aa10.65□□□□□ -0.7
ECHDC1-212ENST00000461239 SBF2Q86WG5 1849 aa10.64□□□□□ -0.71
ECHDC1-212ENST00000461239 ZNF76P36508 570 aa10.64□□□□□ -0.71
ECHDC1-212ENST00000461239 NT5DC4Q86YG4 428 aa10.64□□□□□ -0.71
ECHDC1-212ENST00000461239 RNF34Q969K3 372 aa10.64□□□□□ -0.71
ECHDC1-212ENST00000461239 ACSBG1Q96GR2 724 aa10.64□□□□□ -0.71
ECHDC1-212ENST00000461239 TNS1Q9HBL0 1735 aaKnown RBP10.64□□□□□ -0.71
ECHDC1-212ENST00000461239 DCDC2BA2VCK2 349 aa10.63□□□□□ -0.71
ECHDC1-212ENST00000461239 U2SURPO15042 1029 aaKnown RBP10.63□□□□□ -0.71
ECHDC1-212ENST00000461239 SASH3O75995 380 aa10.63□□□□□ -0.71
ECHDC1-212ENST00000461239 PHKG2P15735 406 aa10.63□□□□□ -0.71
ECHDC1-212ENST00000461239 RIPOR1Q6ZS17 1223 aa10.63□□□□□ -0.71
ECHDC1-212ENST00000461239 CFAP53Q96M91 514 aa10.63□□□□□ -0.71
ECHDC1-212ENST00000461239 GSX2Q9BZM3 304 aa10.63□□□□□ -0.71
ECHDC1-212ENST00000461239 NUCKS1Q9H1E3 243 aaKnown RBP10.63□□□□□ -0.71
ECHDC1-212ENST00000461239 NDFIP2Q9NV92 336 aa10.63□□□□□ -0.71
ECHDC1-212ENST00000461239 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.63□□□□□ -0.71
ECHDC1-212ENST00000461239 PLEKHG2Q9H7P9 1386 aa10.63□□□□□ -0.71
ECHDC1-212ENST00000461239 PCDH11XQ9BZA7 1347 aa10.62□□□□□ -0.71
ECHDC1-212ENST00000461239 PCDH11YQ9BZA8 1340 aa10.62□□□□□ -0.71
ECHDC1-212ENST00000461239 CYP2E1P05181 493 aaPredicted RBP10.62□□□□□ -0.71
ECHDC1-212ENST00000461239 TNP2Q05952 138 aa10.62□□□□□ -0.71
ECHDC1-212ENST00000461239 CCINQ13939 588 aa10.62□□□□□ -0.71
ECHDC1-212ENST00000461239 MTHFSDQ2M296 383 aaKnown RBP10.62□□□□□ -0.71
ECHDC1-212ENST00000461239 PHACTR3Q96KR7 559 aa10.62□□□□□ -0.71
ECHDC1-212ENST00000461239 CUEDC1Q9NWM3 386 aaPredicted RBP10.62□□□□□ -0.71
ECHDC1-212ENST00000461239 KHNYNO15037 678 aaKnown RBP10.61□□□□□ -0.71
ECHDC1-212ENST00000461239 U2AF1L5P0DN76 240 aaPredicted RBP10.61□□□□□ -0.71
ECHDC1-212ENST00000461239 MAPTP10636 758 aaKnown RBP10.61□□□□□ -0.71
ECHDC1-212ENST00000461239 CES1P23141 567 aa10.61□□□□□ -0.71
ECHDC1-212ENST00000461239 TARSP26639 723 aaKnown RBP10.61□□□□□ -0.71
ECHDC1-212ENST00000461239 U2AF1Q01081 240 aaKnown RBP eCLIP10.61□□□□□ -0.71
ECHDC1-212ENST00000461239 LAMC2Q13753 1193 aa10.61□□□□□ -0.71
ECHDC1-212ENST00000461239 GRIN2CQ14957 1233 aa10.61□□□□□ -0.71
ECHDC1-212ENST00000461239 DBN1Q16643 649 aa10.61□□□□□ -0.71
ECHDC1-212ENST00000461239 PLEKHO1Q53GL0 409 aaPredicted RBP10.61□□□□□ -0.71
ECHDC1-212ENST00000461239 NAALADL2Q58DX5 795 aa10.61□□□□□ -0.71
ECHDC1-212ENST00000461239 TTC39BQ5VTQ0 682 aaPredicted RBP10.61□□□□□ -0.71
ECHDC1-212ENST00000461239 PMEPA1Q969W9 287 aa10.61□□□□□ -0.71
ECHDC1-212ENST00000461239 CAMKK2Q96RR4 588 aa10.61□□□□□ -0.71
ECHDC1-212ENST00000461239 PLEKHF1Q96S99 279 aa10.61□□□□□ -0.71
ECHDC1-212ENST00000461239 ZFATQ9P243 1243 aa10.61□□□□□ -0.71
ECHDC1-212ENST00000461239 FAM8A1Q9UBU6 413 aa10.61□□□□□ -0.71
ECHDC1-212ENST00000461239 TOGARAM1Q9Y4F4 1720 aa10.61□□□□□ -0.71
ECHDC1-212ENST00000461239 KDM6AO15550 1401 aaPredicted RBP10.6□□□□□ -0.71
ECHDC1-212ENST00000461239 BNIP3LO60238 219 aa10.6□□□□□ -0.71
ECHDC1-212ENST00000461239 MMP20O60882 483 aa10.6□□□□□ -0.71
ECHDC1-212ENST00000461239 APBA3O96018 575 aa10.6□□□□□ -0.71
ECHDC1-212ENST00000461239 PRKAR2BP31323 418 aa10.6□□□□□ -0.71
ECHDC1-212ENST00000461239 AMOTQ4VCS5 1084 aa10.6□□□□□ -0.71
ECHDC1-212ENST00000461239 ZNF530Q6P9A1 599 aaPredicted RBP10.6□□□□□ -0.71
ECHDC1-212ENST00000461239 NXPE4Q6UWF7 544 aa10.6□□□□□ -0.71
ECHDC1-212ENST00000461239 KRT25Q7Z3Z0 450 aa10.6□□□□□ -0.71
ECHDC1-212ENST00000461239 IFNL2Q8IZJ0 200 aa10.6□□□□□ -0.71
ECHDC1-212ENST00000461239 CCDC155Q8N6L0 562 aa10.6□□□□□ -0.71
ECHDC1-212ENST00000461239 OR13H1Q8NG92 308 aa10.6□□□□□ -0.71
ECHDC1-212ENST00000461239 BCO2Q9BYV7 579 aa10.6□□□□□ -0.71
ECHDC1-212ENST00000461239 SRCIN1Q9C0H9 1055 aa10.6□□□□□ -0.71
ECHDC1-212ENST00000461239 SUV39H2Q9H5I1 410 aa10.6□□□□□ -0.71
ECHDC1-212ENST00000461239 NUDCQ9Y266 331 aa10.6□□□□□ -0.71
ECHDC1-212ENST00000461239 NHSQ6T4R5 1651 aa10.6□□□□□ -0.71
ECHDC1-212ENST00000461239 DOT1LQ8TEK3 1739 aa10.59□□□□□ -0.71
ECHDC1-212ENST00000461239 H7C1W4 665 aa10.59□□□□□ -0.71
ECHDC1-212ENST00000461239 GRM2Q14416 872 aa10.59□□□□□ -0.71
ECHDC1-212ENST00000461239 EZH2Q15910 746 aaKnown RBP10.59□□□□□ -0.71
ECHDC1-212ENST00000461239 PEAR1Q5VY43 1037 aaPredicted RBP10.59□□□□□ -0.71
ECHDC1-212ENST00000461239 TRIM22Q8IYM9 498 aa10.59□□□□□ -0.71
ECHDC1-212ENST00000461239 KANSL3Q9P2N6 904 aa10.59□□□□□ -0.71
ECHDC1-212ENST00000461239 PLSCR1O15162 318 aa10.58□□□□□ -0.72
ECHDC1-212ENST00000461239 GADD45BO75293 160 aaPredicted RBP10.58□□□□□ -0.72
ECHDC1-212ENST00000461239 USP17L7P0C7H9 530 aa10.58□□□□□ -0.72
ECHDC1-212ENST00000461239 MEI1Q5TIA1 1274 aa10.58□□□□□ -0.72
ECHDC1-212ENST00000461239 KIAA0319Q5VV43 1072 aa10.58□□□□□ -0.72
ECHDC1-212ENST00000461239 TGIF2Q9GZN2 237 aa10.58□□□□□ -0.72
ECHDC1-212ENST00000461239 LGR6Q9HBX8 967 aa10.58□□□□□ -0.72
ECHDC1-212ENST00000461239 LATS2Q9NRM7 1088 aa10.58□□□□□ -0.72
ECHDC1-212ENST00000461239 SRCAPQ6ZRS2 3230 aa10.58□□□□□ -0.72
ECHDC1-212ENST00000461239 ANP32CO43423 234 aa10.57□□□□□ -0.72
ECHDC1-212ENST00000461239 RARAP10276 462 aa10.57□□□□□ -0.72
ECHDC1-212ENST00000461239 AKAP4Q5JQC9 854 aa10.57□□□□□ -0.72
ECHDC1-212ENST00000461239 MPRIPQ6WCQ1 1025 aa10.57□□□□□ -0.72
ECHDC1-212ENST00000461239 GLIS3Q8NEA6 775 aa10.57□□□□□ -0.72
ECHDC1-212ENST00000461239 SREK1Q8WXA9 508 aaKnown RBP10.57□□□□□ -0.72
ECHDC1-212ENST00000461239 PIGBQ92521 554 aa10.57□□□□□ -0.72
ECHDC1-212ENST00000461239 ZNF837Q96EG3 531 aaPredicted RBP10.57□□□□□ -0.72
ECHDC1-212ENST00000461239 MARK1Q9P0L2 795 aa10.57□□□□□ -0.72
ECHDC1-212ENST00000461239 SALL4Q9UJQ4 1053 aa10.57□□□□□ -0.72
ECHDC1-212ENST00000461239 ADAMTS8Q9UP79 889 aa10.57□□□□□ -0.72
ECHDC1-212ENST00000461239 BTAF1O14981 1849 aa10.56□□□□□ -0.72
ECHDC1-212ENST00000461239 A0A1W2PP55 124 aa10.56□□□□□ -0.72
ECHDC1-212ENST00000461239 POTECB2RU33 542 aa10.56□□□□□ -0.72
ECHDC1-212ENST00000461239 BAG6P46379 1132 aa10.56□□□□□ -0.72
ECHDC1-212ENST00000461239 PTPN12Q05209 780 aaKnown RBP10.56□□□□□ -0.72
ECHDC1-212ENST00000461239 SPEM2Q0P670 501 aa10.56□□□□□ -0.72
ECHDC1-212ENST00000461239 SYTL4Q96C24 671 aaPredicted RBP10.56□□□□□ -0.72
ECHDC1-212ENST00000461239 ABHD17AQ96GS6 310 aa10.56□□□□□ -0.72
ECHDC1-212ENST00000461239 DCAF5Q96JK2 942 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms