RNA–Protein interactions for RNA: ENST00000461004.1

RTN4-212, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 422 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-212ENST00000461004 TRPM4Q8TD43 1214 aa9□□□□□ -0.97
RTN4-212ENST00000461004 EAF2Q96CJ1 260 aaPredicted RBP9□□□□□ -0.97
RTN4-212ENST00000461004 DBNDD2Q9BQY9 259 aa9□□□□□ -0.97
RTN4-212ENST00000461004 CCDC8Q9H0W5 538 aaPredicted RBP9□□□□□ -0.97
RTN4-212ENST00000461004 CHMP4BQ9H444 224 aaKnown RBP9□□□□□ -0.97
RTN4-212ENST00000461004 HACL1Q9UJ83 578 aa9□□□□□ -0.97
RTN4-212ENST00000461004 PCDHAC2Q9Y5I4 1007 aa9□□□□□ -0.97
RTN4-212ENST00000461004 FPGT-TNNI3KV9GXZ4 949 aa9□□□□□ -0.97
RTN4-212ENST00000461004 F8W031 263 aaPredicted RBP8.99□□□□□ -0.97
RTN4-212ENST00000461004 IGHDP01880 384 aa8.99□□□□□ -0.97
RTN4-212ENST00000461004 SCARF1Q14162 830 aa8.99□□□□□ -0.97
RTN4-212ENST00000461004 TBC1D10BQ4KMP7 808 aaPredicted RBP8.99□□□□□ -0.97
RTN4-212ENST00000461004 CAVIN4Q5BKX8 364 aa8.99□□□□□ -0.97
RTN4-212ENST00000461004 VPS37DQ86XT2 251 aa8.99□□□□□ -0.97
RTN4-212ENST00000461004 KIAA0825Q8IV33 1275 aa8.99□□□□□ -0.97
RTN4-212ENST00000461004 NUDT12Q9BQG2 462 aa8.99□□□□□ -0.97
RTN4-212ENST00000461004 COL1A1P02452 1464 aaPredicted RBP8.99□□□□□ -0.97
RTN4-212ENST00000461004 ASTN2O75129 1339 aaPredicted RBP8.99□□□□□ -0.97
RTN4-212ENST00000461004 ZNF609O15014 1411 aa8.98□□□□□ -0.97
RTN4-212ENST00000461004 RNF223E7ERA6 249 aa8.98□□□□□ -0.97
RTN4-212ENST00000461004 HMMRO75330 724 aa8.98□□□□□ -0.97
RTN4-212ENST00000461004 LMOD1P29536 600 aaPredicted RBP8.98□□□□□ -0.97
RTN4-212ENST00000461004 FMR1Q06787 632 aaKnown RBP eCLIP8.98□□□□□ -0.97
RTN4-212ENST00000461004 PTCRAQ6ISU1 281 aaPredicted RBP8.98□□□□□ -0.97
RTN4-212ENST00000461004 PI16Q6UXB8 463 aa8.98□□□□□ -0.97
RTN4-212ENST00000461004 DLK2Q6UY11 383 aa8.98□□□□□ -0.97
RTN4-212ENST00000461004 DPF2Q92785 391 aa8.98□□□□□ -0.97
RTN4-212ENST00000461004 DCTPP1Q9H773 170 aa8.98□□□□□ -0.97
RTN4-212ENST00000461004 GDPD2Q9HCC8 539 aa8.98□□□□□ -0.97
RTN4-212ENST00000461004 EVA1BQ9NVM1 165 aa8.98□□□□□ -0.97
RTN4-212ENST00000461004 DBNLQ9UJU6 430 aaKnown RBP8.98□□□□□ -0.97
RTN4-212ENST00000461004 SCAF8Q9UPN6 1271 aaKnown RBP8.98□□□□□ -0.97
RTN4-212ENST00000461004 AKAP2Q9Y2D5 859 aa8.98□□□□□ -0.97
RTN4-212ENST00000461004 AOX1Q06278 1338 aa8.98□□□□□ -0.97
RTN4-212ENST00000461004 FAM205AQ6ZU69 1335 aa8.98□□□□□ -0.97
RTN4-212ENST00000461004 ZNF646O15015 1829 aaPredicted RBP8.98□□□□□ -0.97
RTN4-212ENST00000461004 IQCA1LA6NCM1 817 aa8.97□□□□□ -0.97
RTN4-212ENST00000461004 FRAT2O75474 233 aaPredicted RBP8.97□□□□□ -0.97
RTN4-212ENST00000461004 CCNYL3P0C7X3 344 aa8.97□□□□□ -0.97
RTN4-212ENST00000461004 RASGRF1Q13972 1273 aa8.97□□□□□ -0.97
RTN4-212ENST00000461004 PLA2G2CQ5R387 149 aa8.97□□□□□ -0.97
RTN4-212ENST00000461004 MFSD14BQ5SR56 506 aa8.97□□□□□ -0.97
RTN4-212ENST00000461004 PPP1R18Q6NYC8 613 aa8.97□□□□□ -0.97
RTN4-212ENST00000461004 AACSQ86V21 672 aa8.97□□□□□ -0.97
RTN4-212ENST00000461004 C16orf71Q8IYS4 520 aaPredicted RBP8.97□□□□□ -0.97
RTN4-212ENST00000461004 AGBL3Q8NEM8 1001 aa8.97□□□□□ -0.97
RTN4-212ENST00000461004 GPR108Q9NPR9 543 aa8.97□□□□□ -0.97
RTN4-212ENST00000461004 ADARB2Q9NS39 739 aaKnown RBP8.97□□□□□ -0.97
RTN4-212ENST00000461004 FCF1Q9Y324 198 aaKnown RBP8.97□□□□□ -0.97
RTN4-212ENST00000461004 NDUFB9Q9Y6M9 179 aa8.97□□□□□ -0.97
RTN4-212ENST00000461004 H7C1D1 291 aa8.96□□□□□ -0.98
RTN4-212ENST00000461004 RAB11FIP3O75154 756 aa8.96□□□□□ -0.98
RTN4-212ENST00000461004 TOMM70O94826 608 aa8.96□□□□□ -0.98
RTN4-212ENST00000461004 RPS12P25398 132 aaKnown RBP8.96□□□□□ -0.98
RTN4-212ENST00000461004 MCAMP43121 646 aa8.96□□□□□ -0.98
RTN4-212ENST00000461004 ZNF280AP59817 542 aaPredicted RBP8.96□□□□□ -0.98
RTN4-212ENST00000461004 GORABQ5T7V8 394 aa8.96□□□□□ -0.98
RTN4-212ENST00000461004 MAP1SQ66K74 1059 aaPredicted RBP8.96□□□□□ -0.98
RTN4-212ENST00000461004 TBC1D9Q6ZT07 1266 aa8.96□□□□□ -0.98
RTN4-212ENST00000461004 ERC1Q8IUD2 1116 aa8.96□□□□□ -0.98
RTN4-212ENST00000461004 KIF1BPQ96EK5 621 aa8.96□□□□□ -0.98
RTN4-212ENST00000461004 ZMYND15Q9H091 742 aa8.96□□□□□ -0.98
RTN4-212ENST00000461004 HMG20BQ9P0W2 317 aa8.96□□□□□ -0.98
RTN4-212ENST00000461004 PSME4Q14997 1843 aa8.96□□□□□ -0.98
RTN4-212ENST00000461004 PRDX5P30044 214 aa8.95□□□□□ -0.98
RTN4-212ENST00000461004 C1QTNF8P60827 252 aa8.95□□□□□ -0.98
RTN4-212ENST00000461004 KCNH2Q12809 1159 aa8.95□□□□□ -0.98
RTN4-212ENST00000461004 HDAC1Q13547 482 aaPredicted RBP8.95□□□□□ -0.98
RTN4-212ENST00000461004 KIF4BQ2VIQ3 1234 aa8.95□□□□□ -0.98
RTN4-212ENST00000461004 NBPF9Q3BBW0 867 aa8.95□□□□□ -0.98
RTN4-212ENST00000461004 HSP90AB4PQ58FF6 505 aa8.95□□□□□ -0.98
RTN4-212ENST00000461004 USP50Q70EL3 339 aaPredicted RBP8.95□□□□□ -0.98
RTN4-212ENST00000461004 OTUD7AQ8TE49 926 aaPredicted RBP8.95□□□□□ -0.98
RTN4-212ENST00000461004 LRRCC1Q9C099 1032 aa8.95□□□□□ -0.98
RTN4-212ENST00000461004 MYOZ2Q9NPC6 264 aa8.95□□□□□ -0.98
RTN4-212ENST00000461004 SCN4AP35499 1836 aa8.95□□□□□ -0.98
RTN4-212ENST00000461004 TRAF5O00463 557 aa8.94□□□□□ -0.98
RTN4-212ENST00000461004 WNT10BO00744 389 aa8.94□□□□□ -0.98
RTN4-212ENST00000461004 ARID4AP29374 1257 aaPredicted RBP8.94□□□□□ -0.98
RTN4-212ENST00000461004 CTHP32929 405 aa8.94□□□□□ -0.98
RTN4-212ENST00000461004 ZAP70P43403 619 aa8.94□□□□□ -0.98
RTN4-212ENST00000461004 FKBP1AP62942 108 aaKnown RBP8.94□□□□□ -0.98
RTN4-212ENST00000461004 IRF5Q13568 498 aa8.94□□□□□ -0.98
RTN4-212ENST00000461004 CFAP100Q494V2 611 aa8.94□□□□□ -0.98
RTN4-212ENST00000461004 TTC39AQ5SRH9 613 aa8.94□□□□□ -0.98
RTN4-212ENST00000461004 IFFO2Q5TF58 517 aa8.94□□□□□ -0.98
RTN4-212ENST00000461004 TSHZ3Q63HK5 1081 aa8.94□□□□□ -0.98
RTN4-212ENST00000461004 PNMA8AQ86V59 439 aaPredicted RBP8.94□□□□□ -0.98
RTN4-212ENST00000461004 LDHDQ86WU2 507 aa8.94□□□□□ -0.98
RTN4-212ENST00000461004 CNTROBQ8N137 903 aa8.94□□□□□ -0.98
RTN4-212ENST00000461004 CLASRPQ8N2M8 674 aaKnown RBP8.94□□□□□ -0.98
RTN4-212ENST00000461004 SPATA5Q8NB90 893 aa8.94□□□□□ -0.98
RTN4-212ENST00000461004 ZNF384Q8TF68 577 aa8.94□□□□□ -0.98
RTN4-212ENST00000461004 EMID1Q96A84 441 aaPredicted RBP8.94□□□□□ -0.98
RTN4-212ENST00000461004 PRMT6Q96LA8 375 aaPredicted RBP8.94□□□□□ -0.98
RTN4-212ENST00000461004 GNL3LQ9NVN8 582 aaKnown RBP8.94□□□□□ -0.98
RTN4-212ENST00000461004 PLA2G2EQ9NZK7 142 aa8.94□□□□□ -0.98
RTN4-212ENST00000461004 DENND2AQ9ULE3 1009 aa8.94□□□□□ -0.98
RTN4-212ENST00000461004 TTF2Q9UNY4 1162 aaKnown RBP8.94□□□□□ -0.98
RTN4-212ENST00000461004 ARAP2Q8WZ64 1704 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms