RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 RAB3GAP2Q9H2M9 1393 aa6.9□□□□□ -1.31
ATPAF1-203ENST00000460928 HFM1A2PYH4 1435 aa6.9□□□□□ -1.31
ATPAF1-203ENST00000460928 UNCXA6NJT0 531 aa6.89□□□□□ -1.31
ATPAF1-203ENST00000460928 ADAMTS4O75173 837 aa6.89□□□□□ -1.31
ATPAF1-203ENST00000460928 CENPBP07199 599 aaPredicted RBP6.89□□□□□ -1.31
ATPAF1-203ENST00000460928 TXKP42681 527 aa6.89□□□□□ -1.31
ATPAF1-203ENST00000460928 SGO2Q562F6 1265 aa6.89□□□□□ -1.31
ATPAF1-203ENST00000460928 EXOSC6Q5RKV6 272 aaKnown RBP6.89□□□□□ -1.31
ATPAF1-203ENST00000460928 ASAP3Q8TDY4 903 aa6.89□□□□□ -1.31
ATPAF1-203ENST00000460928 FMNL2Q96PY5 1086 aa6.89□□□□□ -1.31
ATPAF1-203ENST00000460928 LATS2Q9NRM7 1088 aa6.89□□□□□ -1.31
ATPAF1-203ENST00000460928 EGFL7Q9UHF1 273 aa6.89□□□□□ -1.31
ATPAF1-203ENST00000460928 SETD5Q9C0A6 1442 aa6.89□□□□□ -1.31
ATPAF1-203ENST00000460928 DEPDC5O75140 1603 aa6.89□□□□□ -1.31
ATPAF1-203ENST00000460928 EIF2AK4Q9P2K8 1649 aaKnown RBP6.89□□□□□ -1.31
ATPAF1-203ENST00000460928 UNC13BO14795 1591 aa6.88□□□□□ -1.31
ATPAF1-203ENST00000460928 WDR64B1ANS9 1081 aa6.88□□□□□ -1.31
ATPAF1-203ENST00000460928 TOM1O60784 492 aa6.88□□□□□ -1.31
ATPAF1-203ENST00000460928 DLGAP3O95886 979 aa6.88□□□□□ -1.31
ATPAF1-203ENST00000460928 C12orf50Q8NA57 414 aaPredicted RBP6.88□□□□□ -1.31
ATPAF1-203ENST00000460928 GIMAP7Q8NHV1 300 aa6.88□□□□□ -1.31
ATPAF1-203ENST00000460928 MFSD14AQ96MC6 490 aa6.88□□□□□ -1.31
ATPAF1-203ENST00000460928 CCDC87Q9NVE4 849 aa6.88□□□□□ -1.31
ATPAF1-203ENST00000460928 PIM2Q9P1W9 311 aa6.88□□□□□ -1.31
ATPAF1-203ENST00000460928 CAMSAP1Q5T5Y3 1602 aa6.87□□□□□ -1.31
ATPAF1-203ENST00000460928 VWDEQ8N2E2 1590 aa6.87□□□□□ -1.31
ATPAF1-203ENST00000460928 UGGT1Q9NYU2 1555 aa6.87□□□□□ -1.31
ATPAF1-203ENST00000460928 PRDM15P57071 1507 aaPredicted RBP6.87□□□□□ -1.31
ATPAF1-203ENST00000460928 KDM5DQ9BY66 1539 aa6.87□□□□□ -1.31
ATPAF1-203ENST00000460928 PZPP20742 1482 aa6.87□□□□□ -1.31
ATPAF1-203ENST00000460928 WNT11O96014 354 aa6.87□□□□□ -1.31
ATPAF1-203ENST00000460928 CCNJLQ8IV13 435 aa6.87□□□□□ -1.31
ATPAF1-203ENST00000460928 GALNT12Q8IXK2 581 aa6.87□□□□□ -1.31
ATPAF1-203ENST00000460928 ANO2Q9NQ90 1003 aa6.87□□□□□ -1.31
ATPAF1-203ENST00000460928 NPATQ14207 1427 aa6.86□□□□□ -1.31
ATPAF1-203ENST00000460928 ICMTO60725 284 aa6.86□□□□□ -1.31
ATPAF1-203ENST00000460928 F13BP05160 661 aa6.86□□□□□ -1.31
ATPAF1-203ENST00000460928 ZNF211Q13398 564 aaPredicted RBP6.86□□□□□ -1.31
ATPAF1-203ENST00000460928 C2CD4AQ8NCU7 369 aaPredicted RBP6.86□□□□□ -1.31
ATPAF1-203ENST00000460928 EZH1Q92800 747 aaPredicted RBP6.86□□□□□ -1.31
ATPAF1-203ENST00000460928 CLEC4MQ9H2X3 399 aaPredicted RBP6.86□□□□□ -1.31
ATPAF1-203ENST00000460928 ATG3Q9NT62 314 aa6.86□□□□□ -1.31
ATPAF1-203ENST00000460928 E9PCH4 1651 aa6.86□□□□□ -1.31
ATPAF1-203ENST00000460928 FAM135AQ9P2D6 1515 aa6.86□□□□□ -1.31
ATPAF1-203ENST00000460928 KANK1Q14678 1352 aa6.85□□□□□ -1.31
ATPAF1-203ENST00000460928 A0A096LPE4 126 aa6.85□□□□□ -1.31
ATPAF1-203ENST00000460928 FAM95CA0A1B0GW59 222 aa6.85□□□□□ -1.31
ATPAF1-203ENST00000460928 A0A1W2PP55 124 aa6.85□□□□□ -1.31
ATPAF1-203ENST00000460928 A0A1W2PPZ6 126 aa6.85□□□□□ -1.31
ATPAF1-203ENST00000460928 ANKRD33BA6NCL7 494 aa6.85□□□□□ -1.31
ATPAF1-203ENST00000460928 METTL12A8MUP2 240 aa6.85□□□□□ -1.31
ATPAF1-203ENST00000460928 H3BRB1 525 aa6.85□□□□□ -1.31
ATPAF1-203ENST00000460928 TAL1P17542 331 aaPredicted RBP6.85□□□□□ -1.31
ATPAF1-203ENST00000460928 RXRBP28702 533 aa6.85□□□□□ -1.31
ATPAF1-203ENST00000460928 GSTM4Q03013 218 aa6.85□□□□□ -1.31
ATPAF1-203ENST00000460928 SOX4Q06945 474 aaPredicted RBP6.85□□□□□ -1.31
ATPAF1-203ENST00000460928 MSMPQ1L6U9 139 aa6.85□□□□□ -1.31
ATPAF1-203ENST00000460928 GLYCTKQ8IVS8 523 aa6.85□□□□□ -1.31
ATPAF1-203ENST00000460928 TCF12Q99081 682 aa6.85□□□□□ -1.31
ATPAF1-203ENST00000460928 METTL22Q9BUU2 404 aaPredicted RBP6.85□□□□□ -1.31
ATPAF1-203ENST00000460928 TUT1Q9H6E5 874 aaKnown RBP6.85□□□□□ -1.31
ATPAF1-203ENST00000460928 IQGAP3Q86VI3 1631 aa6.85□□□□□ -1.31
ATPAF1-203ENST00000460928 MROH2AA6NES4 1674 aa6.84□□□□□ -1.31
ATPAF1-203ENST00000460928 KRTAP4-8A0A0G2JLE6 195 aa6.84□□□□□ -1.31
ATPAF1-203ENST00000460928 DRD2P14416 443 aa6.84□□□□□ -1.31
ATPAF1-203ENST00000460928 FOSL1P15407 271 aa6.84□□□□□ -1.31
ATPAF1-203ENST00000460928 HOXA10P31260 410 aaPredicted RBP6.84□□□□□ -1.31
ATPAF1-203ENST00000460928 PCDH1Q08174 1060 aa6.84□□□□□ -1.31
ATPAF1-203ENST00000460928 HP1BP3Q5SSJ5 553 aaPredicted RBP6.84□□□□□ -1.31
ATPAF1-203ENST00000460928 CDPF1Q6NVV7 123 aa6.84□□□□□ -1.31
ATPAF1-203ENST00000460928 PAOXQ6QHF9 649 aa6.84□□□□□ -1.31
ATPAF1-203ENST00000460928 MPHOSPH9Q99550 1183 aa6.84□□□□□ -1.31
ATPAF1-203ENST00000460928 YIPF2Q9BWQ6 316 aa6.84□□□□□ -1.31
ATPAF1-203ENST00000460928 BCL2L13Q9BXK5 485 aa6.84□□□□□ -1.31
ATPAF1-203ENST00000460928 LEMD3Q9Y2U8 911 aa6.84□□□□□ -1.31
ATPAF1-203ENST00000460928 EFCAB6Q5THR3 1501 aa6.84□□□□□ -1.31
ATPAF1-203ENST00000460928 ERVK-7P63135 1459 aa6.84□□□□□ -1.31
ATPAF1-203ENST00000460928 CNTLNQ9NXG0 1405 aa6.84□□□□□ -1.32
ATPAF1-203ENST00000460928 TET3O43151 1660 aa6.84□□□□□ -1.32
ATPAF1-203ENST00000460928 TNRQ92752 1358 aa6.83□□□□□ -1.32
ATPAF1-203ENST00000460928 SYNMO15061 1565 aa6.83□□□□□ -1.32
ATPAF1-203ENST00000460928 PRNPP04156 253 aa6.83□□□□□ -1.32
ATPAF1-203ENST00000460928 CYP11A1P05108 521 aa6.83□□□□□ -1.32
ATPAF1-203ENST00000460928 POLR3DP05423 398 aaPredicted RBP6.83□□□□□ -1.32
ATPAF1-203ENST00000460928 NEFLP07196 543 aa6.83□□□□□ -1.32
ATPAF1-203ENST00000460928 ADH5P11766 374 aa6.83□□□□□ -1.32
ATPAF1-203ENST00000460928 ZNF16P17020 682 aaPredicted RBP6.83□□□□□ -1.32
ATPAF1-203ENST00000460928 GRIA4P48058 902 aa6.83□□□□□ -1.32
ATPAF1-203ENST00000460928 USP11P51784 963 aa6.83□□□□□ -1.32
ATPAF1-203ENST00000460928 ECM1Q16610 540 aa6.83□□□□□ -1.32
ATPAF1-203ENST00000460928 ZNF423Q2M1K9 1284 aa6.83□□□□□ -1.32
ATPAF1-203ENST00000460928 FBLIM1Q8WUP2 373 aa6.83□□□□□ -1.32
ATPAF1-203ENST00000460928 MRRFQ96E11 262 aaKnown RBP6.83□□□□□ -1.32
ATPAF1-203ENST00000460928 OSBPL1AQ9BXW6 950 aa6.83□□□□□ -1.32
ATPAF1-203ENST00000460928 LIN7BQ9HAP6 207 aa6.83□□□□□ -1.32
ATPAF1-203ENST00000460928 ZFYVE1Q9HBF4 777 aa6.83□□□□□ -1.32
ATPAF1-203ENST00000460928 PLA2R1Q13018 1463 aa6.83□□□□□ -1.32
ATPAF1-203ENST00000460928 LMTK2Q8IWU2 1503 aa6.82□□□□□ -1.32
ATPAF1-203ENST00000460928 ZC3H13Q5T200 1668 aaKnown RBP6.82□□□□□ -1.32
ATPAF1-203ENST00000460928 YBX3P16989 372 aaKnown RBP eCLIP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms