RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 AMOTL1Q8IY63 956 aa13.01□□□□□ -0.33
CCDC12-204ENST00000460035 CRACR2BQ8N4Y2 399 aaPredicted RBP13.01□□□□□ -0.33
CCDC12-204ENST00000460035 SLC10A4Q96EP9 437 aa13.01□□□□□ -0.33
CCDC12-204ENST00000460035 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.01□□□□□ -0.33
CCDC12-204ENST00000460035 GREB1LQ9C091 1923 aaPredicted RBP13□□□□□ -0.33
CCDC12-204ENST00000460035 FAM196BA6NMK8 535 aa13□□□□□ -0.33
CCDC12-204ENST00000460035 GSG1L2A8MUP6 293 aa13□□□□□ -0.33
CCDC12-204ENST00000460035 USP17L12C9JPN9 530 aa13□□□□□ -0.33
CCDC12-204ENST00000460035 USP17L21D6R901 530 aa13□□□□□ -0.33
CCDC12-204ENST00000460035 TBC1D12O60347 775 aa13□□□□□ -0.33
CCDC12-204ENST00000460035 LDLRAD1Q5T700 205 aa13□□□□□ -0.33
CCDC12-204ENST00000460035 RGMBQ6NW40 437 aa13□□□□□ -0.33
CCDC12-204ENST00000460035 GIMAP6Q6P9H5 292 aa13□□□□□ -0.33
CCDC12-204ENST00000460035 ANKRD13AQ8IZ07 590 aa13□□□□□ -0.33
CCDC12-204ENST00000460035 KLRG1Q96E93 195 aa13□□□□□ -0.33
CCDC12-204ENST00000460035 WRNIP1Q96S55 665 aa13□□□□□ -0.33
CCDC12-204ENST00000460035 NACAP1Q9BZK3 213 aa13□□□□□ -0.33
CCDC12-204ENST00000460035 CSADQ9Y600 493 aa13□□□□□ -0.33
CCDC12-204ENST00000460035 MYH4Q9Y623 1939 aa13□□□□□ -0.33
CCDC12-204ENST00000460035 CYP2D6P10635 497 aa12.99□□□□□ -0.33
CCDC12-204ENST00000460035 CHMLP26374 656 aa12.99□□□□□ -0.33
CCDC12-204ENST00000460035 ECE1P42892 770 aa12.99□□□□□ -0.33
CCDC12-204ENST00000460035 TDO2P48775 406 aa12.99□□□□□ -0.33
CCDC12-204ENST00000460035 PLCD1P51178 756 aa12.99□□□□□ -0.33
CCDC12-204ENST00000460035 MFAP1P55081 439 aaKnown RBP12.99□□□□□ -0.33
CCDC12-204ENST00000460035 CYP4F22Q6NT55 531 aa12.99□□□□□ -0.33
CCDC12-204ENST00000460035 METTL16Q86W50 562 aaKnown RBP12.99□□□□□ -0.33
CCDC12-204ENST00000460035 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.99□□□□□ -0.33
CCDC12-204ENST00000460035 RUFY2Q8WXA3 655 aa12.99□□□□□ -0.33
CCDC12-204ENST00000460035 ZKSCAN4Q969J2 545 aaPredicted RBP12.99□□□□□ -0.33
CCDC12-204ENST00000460035 CCDC102AQ96A19 550 aa12.99□□□□□ -0.33
CCDC12-204ENST00000460035 CLMNQ96JQ2 1002 aa12.99□□□□□ -0.33
CCDC12-204ENST00000460035 CAPNS2Q96L46 248 aa12.99□□□□□ -0.33
CCDC12-204ENST00000460035 EHD4Q9H223 541 aa12.99□□□□□ -0.33
CCDC12-204ENST00000460035 HERC5Q9UII4 1024 aaKnown RBP12.99□□□□□ -0.33
CCDC12-204ENST00000460035 ZNF112Q9UJU3 913 aa12.99□□□□□ -0.33
CCDC12-204ENST00000460035 TAOK2Q9UL54 1235 aa12.99□□□□□ -0.33
CCDC12-204ENST00000460035 CYP2D7A0A087X1C5 515 aa12.98□□□□□ -0.33
CCDC12-204ENST00000460035 MINDY4BA8MYZ0 360 aa12.98□□□□□ -0.33
CCDC12-204ENST00000460035 INPP5BP32019 993 aa12.98□□□□□ -0.33
CCDC12-204ENST00000460035 VEGFBP49765 207 aa12.98□□□□□ -0.33
CCDC12-204ENST00000460035 MKRN3Q13064 507 aaKnown RBP12.98□□□□□ -0.33
CCDC12-204ENST00000460035 CTR9Q6PD62 1173 aa12.98□□□□□ -0.33
CCDC12-204ENST00000460035 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.98□□□□□ -0.33
CCDC12-204ENST00000460035 ZNF589Q86UQ0 364 aaPredicted RBP12.98□□□□□ -0.33
CCDC12-204ENST00000460035 IFNL3Q8IZI9 196 aa12.98□□□□□ -0.33
CCDC12-204ENST00000460035 NAPBQ9H115 298 aa12.98□□□□□ -0.33
CCDC12-204ENST00000460035 ELP3Q9H9T3 547 aa12.98□□□□□ -0.33
CCDC12-204ENST00000460035 SERPINB13Q9UIV8 391 aa12.98□□□□□ -0.33
CCDC12-204ENST00000460035 CCDC171Q6TFL3 1326 aa12.97□□□□□ -0.33
CCDC12-204ENST00000460035 RAD50Q92878 1312 aa12.97□□□□□ -0.33
CCDC12-204ENST00000460035 PHF20L1A8MW92 1017 aa12.97□□□□□ -0.33
CCDC12-204ENST00000460035 EVX2Q03828 476 aa12.97□□□□□ -0.33
CCDC12-204ENST00000460035 VGLL4Q14135 290 aa12.97□□□□□ -0.33
CCDC12-204ENST00000460035 C12orf60Q5U649 245 aa12.97□□□□□ -0.33
CCDC12-204ENST00000460035 VPS53Q5VIR6 699 aa12.97□□□□□ -0.33
CCDC12-204ENST00000460035 STK11IPQ8N1F8 1099 aa12.97□□□□□ -0.33
CCDC12-204ENST00000460035 DYNLL2Q96FJ2 89 aa12.97□□□□□ -0.33
CCDC12-204ENST00000460035 EPB41L4AQ9HCS5 686 aaPredicted RBP12.97□□□□□ -0.33
CCDC12-204ENST00000460035 GTF3C3Q9Y5Q9 886 aa12.97□□□□□ -0.33
CCDC12-204ENST00000460035 ZMYM6O95789 1325 aa12.96□□□□□ -0.33
CCDC12-204ENST00000460035 WDR33Q9C0J8 1336 aaKnown RBP12.96□□□□□ -0.33
CCDC12-204ENST00000460035 FOXP2O15409 715 aa12.96□□□□□ -0.33
CCDC12-204ENST00000460035 CTNND1O60716 968 aaKnown RBP12.96□□□□□ -0.33
CCDC12-204ENST00000460035 SBK1Q52WX2 424 aa12.96□□□□□ -0.33
CCDC12-204ENST00000460035 NOL9Q5SY16 702 aaKnown RBP12.96□□□□□ -0.33
CCDC12-204ENST00000460035 DNAJC5GQ8N7S2 189 aa12.96□□□□□ -0.33
CCDC12-204ENST00000460035 DNAJC18Q9H819 358 aa12.96□□□□□ -0.33
CCDC12-204ENST00000460035 PICK1Q9NRD5 415 aa12.96□□□□□ -0.33
CCDC12-204ENST00000460035 ARPP21Q9UBL0 812 aaPredicted RBP12.96□□□□□ -0.33
CCDC12-204ENST00000460035 ROBO3Q96MS0 1386 aa12.95□□□□□ -0.34
CCDC12-204ENST00000460035 LOC285556D6RIA3 1793 aa12.95□□□□□ -0.34
CCDC12-204ENST00000460035 AOC2O75106 756 aa12.95□□□□□ -0.34
CCDC12-204ENST00000460035 SLC10A3P09131 477 aa12.95□□□□□ -0.34
CCDC12-204ENST00000460035 HSPD1P10809 573 aaKnown RBP12.95□□□□□ -0.34
CCDC12-204ENST00000460035 GABPAQ06546 454 aa12.95□□□□□ -0.34
CCDC12-204ENST00000460035 ALX1Q15699 326 aa12.95□□□□□ -0.34
CCDC12-204ENST00000460035 CASC1Q6TDU7 716 aa12.95□□□□□ -0.34
CCDC12-204ENST00000460035 RASAL3Q86YV0 1011 aa12.95□□□□□ -0.34
CCDC12-204ENST00000460035 FAM155AB1AL88 458 aaPredicted RBP12.94□□□□□ -0.34
CCDC12-204ENST00000460035 SMIM22K7EJ46 135 aa12.94□□□□□ -0.34
CCDC12-204ENST00000460035 CDC45O75419 566 aa12.94□□□□□ -0.34
CCDC12-204ENST00000460035 FGAP02671 866 aa12.94□□□□□ -0.34
CCDC12-204ENST00000460035 SLC3A2P08195 630 aaKnown RBP12.94□□□□□ -0.34
CCDC12-204ENST00000460035 CAP2P40123 477 aa12.94□□□□□ -0.34
CCDC12-204ENST00000460035 CDK8P49336 464 aa12.94□□□□□ -0.34
CCDC12-204ENST00000460035 NOGQ13253 232 aa12.94□□□□□ -0.34
CCDC12-204ENST00000460035 RRP1BQ14684 758 aaKnown RBP12.94□□□□□ -0.34
CCDC12-204ENST00000460035 CERKLQ49MI3 558 aaPredicted RBP12.94□□□□□ -0.34
CCDC12-204ENST00000460035 SPRYD7Q5W111 196 aa12.94□□□□□ -0.34
CCDC12-204ENST00000460035 KIAA1211Q6ZU35 1233 aa12.94□□□□□ -0.34
CCDC12-204ENST00000460035 ERO1BQ86YB8 467 aa12.94□□□□□ -0.34
CCDC12-204ENST00000460035 SCYL3Q8IZE3 742 aa12.94□□□□□ -0.34
CCDC12-204ENST00000460035 SLC44A5Q8NCS7 719 aa12.94□□□□□ -0.34
CCDC12-204ENST00000460035 CNKSR2Q8WXI2 1034 aa12.94□□□□□ -0.34
CCDC12-204ENST00000460035 OPTNQ96CV9 577 aa12.94□□□□□ -0.34
CCDC12-204ENST00000460035 OTUD5Q96G74 571 aa12.94□□□□□ -0.34
CCDC12-204ENST00000460035 WNK4Q96J92 1243 aa12.94□□□□□ -0.34
CCDC12-204ENST00000460035 MKNK2Q9HBH9 465 aa12.94□□□□□ -0.34
CCDC12-204ENST00000460035 SWAP70Q9UH65 585 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms