RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 BECN1Q14457 450 aa10.37□□□□□ -0.75
RIF1-208ENST00000457745 IMMTQ16891 758 aaKnown RBP10.37□□□□□ -0.75
RIF1-208ENST00000457745 SHROOM1Q2M3G4 852 aaPredicted RBP10.37□□□□□ -0.75
RIF1-208ENST00000457745 SH3BP5LQ7L8J4 393 aa10.37□□□□□ -0.75
RIF1-208ENST00000457745 CDAN1Q8IWY9 1227 aa10.37□□□□□ -0.75
RIF1-208ENST00000457745 BRF1Q92994 677 aa10.37□□□□□ -0.75
RIF1-208ENST00000457745 RNF25Q96BH1 459 aaPredicted RBP10.37□□□□□ -0.75
RIF1-208ENST00000457745 AGXT2Q9BYV1 514 aa10.37□□□□□ -0.75
RIF1-208ENST00000457745 TMX4Q9H1E5 349 aaPredicted RBP10.37□□□□□ -0.75
RIF1-208ENST00000457745 TAOK2Q9UL54 1235 aa10.37□□□□□ -0.75
RIF1-208ENST00000457745 ASTN2O75129 1339 aaPredicted RBP10.36□□□□□ -0.75
RIF1-208ENST00000457745 LTBP3Q9NS15 1303 aa10.36□□□□□ -0.75
RIF1-208ENST00000457745 G3V3G9 751 aa10.36□□□□□ -0.75
RIF1-208ENST00000457745 PRC1O43663 620 aa10.36□□□□□ -0.75
RIF1-208ENST00000457745 ST18O60284 1047 aa10.36□□□□□ -0.75
RIF1-208ENST00000457745 PPFIA3O75145 1194 aa10.36□□□□□ -0.75
RIF1-208ENST00000457745 GNAT2P19087 354 aa10.36□□□□□ -0.75
RIF1-208ENST00000457745 FKBP1AP62942 108 aaKnown RBP10.36□□□□□ -0.75
RIF1-208ENST00000457745 GSTO1P78417 241 aa10.36□□□□□ -0.75
RIF1-208ENST00000457745 RNF20Q5VTR2 975 aa10.36□□□□□ -0.75
RIF1-208ENST00000457745 RSBN1LQ6PCB5 846 aaPredicted RBP10.36□□□□□ -0.75
RIF1-208ENST00000457745 DHX32Q7L7V1 743 aaKnown RBP10.36□□□□□ -0.75
RIF1-208ENST00000457745 TEX11Q8IYF3 940 aa10.36□□□□□ -0.75
RIF1-208ENST00000457745 STAG1Q8WVM7 1258 aa10.36□□□□□ -0.75
RIF1-208ENST00000457745 PRMT6Q96LA8 375 aaPredicted RBP10.36□□□□□ -0.75
RIF1-208ENST00000457745 ZKSCAN3Q9BRR0 538 aa10.36□□□□□ -0.75
RIF1-208ENST00000457745 CRNKL1Q9BZJ0 848 aaKnown RBP10.36□□□□□ -0.75
RIF1-208ENST00000457745 FAM198AQ9UFP1 575 aa10.36□□□□□ -0.75
RIF1-208ENST00000457745 CTNNA3Q9UI47 895 aa10.36□□□□□ -0.75
RIF1-208ENST00000457745 ANAPC4Q9UJX5 808 aa10.36□□□□□ -0.75
RIF1-208ENST00000457745 ZNRF3Q9ULT6 936 aa10.36□□□□□ -0.75
RIF1-208ENST00000457745 SCAF8Q9UPN6 1271 aaKnown RBP10.36□□□□□ -0.75
RIF1-208ENST00000457745 HPS5Q9UPZ3 1129 aa10.36□□□□□ -0.75
RIF1-208ENST00000457745 ZDHHC9Q9Y397 364 aa10.36□□□□□ -0.75
RIF1-208ENST00000457745 SH2B2O14492 632 aaPredicted RBP10.35□□□□□ -0.75
RIF1-208ENST00000457745 NMT2O60551 498 aa10.35□□□□□ -0.75
RIF1-208ENST00000457745 KDM4AO75164 1064 aa10.35□□□□□ -0.75
RIF1-208ENST00000457745 CTDNEP1O95476 244 aa10.35□□□□□ -0.75
RIF1-208ENST00000457745 FGRP09769 529 aa10.35□□□□□ -0.75
RIF1-208ENST00000457745 STK3Q13188 491 aa10.35□□□□□ -0.75
RIF1-208ENST00000457745 PICALMQ13492 652 aa10.35□□□□□ -0.75
RIF1-208ENST00000457745 KRT32Q14532 448 aa10.35□□□□□ -0.75
RIF1-208ENST00000457745 CFAP100Q494V2 611 aa10.35□□□□□ -0.75
RIF1-208ENST00000457745 SBK1Q52WX2 424 aa10.35□□□□□ -0.75
RIF1-208ENST00000457745 RRP12Q5JTH9 1297 aaKnown RBP10.35□□□□□ -0.75
RIF1-208ENST00000457745 AKNAD1Q5T1N1 836 aa10.35□□□□□ -0.75
RIF1-208ENST00000457745 C12orf60Q5U649 245 aa10.35□□□□□ -0.75
RIF1-208ENST00000457745 CCDC83Q8IWF9 413 aa10.35□□□□□ -0.75
RIF1-208ENST00000457745 NIM1KQ8IY84 436 aa10.35□□□□□ -0.75
RIF1-208ENST00000457745 ZDHHC15Q96MV8 337 aa10.35□□□□□ -0.75
RIF1-208ENST00000457745 ALDH8A1Q9H2A2 487 aaPredicted RBP10.35□□□□□ -0.75
RIF1-208ENST00000457745 NCOA5Q9HCD5 579 aaKnown RBP10.35□□□□□ -0.75
RIF1-208ENST00000457745 USP40Q9NVE5 1235 aa10.35□□□□□ -0.75
RIF1-208ENST00000457745 MCM9Q9NXL9 1143 aa10.35□□□□□ -0.75
RIF1-208ENST00000457745 ZSWIM5Q9P217 1185 aa10.35□□□□□ -0.75
RIF1-208ENST00000457745 ROBO3Q96MS0 1386 aa10.35□□□□□ -0.75
RIF1-208ENST00000457745 GREB1LQ9C091 1923 aaPredicted RBP10.35□□□□□ -0.75
RIF1-208ENST00000457745 FAM196BA6NMK8 535 aa10.34□□□□□ -0.75
RIF1-208ENST00000457745 JAK2O60674 1132 aa10.34□□□□□ -0.75
RIF1-208ENST00000457745 LDHCP07864 332 aa10.34□□□□□ -0.75
RIF1-208ENST00000457745 PSMA5P28066 241 aa10.34□□□□□ -0.75
RIF1-208ENST00000457745 USP5P45974 858 aa10.34□□□□□ -0.75
RIF1-208ENST00000457745 FAM47AQ5JRC9 791 aa10.34□□□□□ -0.75
RIF1-208ENST00000457745 HHIPL2Q6UWX4 724 aa10.34□□□□□ -0.75
RIF1-208ENST00000457745 RASGRP2Q7LDG7 609 aa10.34□□□□□ -0.75
RIF1-208ENST00000457745 IGDCC4Q8TDY8 1250 aa10.34□□□□□ -0.75
RIF1-208ENST00000457745 ZBED3Q96IU2 234 aaPredicted RBP10.34□□□□□ -0.75
RIF1-208ENST00000457745 MYL10Q9BUA6 226 aa10.34□□□□□ -0.75
RIF1-208ENST00000457745 TDRD3Q9H7E2 651 aaKnown RBP10.34□□□□□ -0.75
RIF1-208ENST00000457745 DNAJC18Q9H819 358 aa10.34□□□□□ -0.75
RIF1-208ENST00000457745 LY9Q9HBG7 655 aa10.34□□□□□ -0.75
RIF1-208ENST00000457745 LIMCH1Q9UPQ0 1083 aa10.34□□□□□ -0.75
RIF1-208ENST00000457745 SUGT1Q9Y2Z0 365 aa10.34□□□□□ -0.75
RIF1-208ENST00000457745 CLRN2A0PK11 232 aa10.33□□□□□ -0.76
RIF1-208ENST00000457745 DDTLA6NHG4 134 aaPredicted RBP10.33□□□□□ -0.76
RIF1-208ENST00000457745 UBE2Q2LH0YL09 131 aa10.33□□□□□ -0.76
RIF1-208ENST00000457745 FZD9O00144 591 aa10.33□□□□□ -0.76
RIF1-208ENST00000457745 RXRAP19793 462 aa10.33□□□□□ -0.76
RIF1-208ENST00000457745 SCRN1Q12765 414 aa10.33□□□□□ -0.76
RIF1-208ENST00000457745 RRP1BQ14684 758 aaKnown RBP10.33□□□□□ -0.76
RIF1-208ENST00000457745 SEC23AQ15436 765 aa10.33□□□□□ -0.76
RIF1-208ENST00000457745 LCE2DQ5TA82 110 aaPredicted RBP10.33□□□□□ -0.76
RIF1-208ENST00000457745 SOGA3Q5TF21 947 aa10.33□□□□□ -0.76
RIF1-208ENST00000457745 GIMAP6Q6P9H5 292 aa10.33□□□□□ -0.76
RIF1-208ENST00000457745 CLEC10AQ8IUN9 316 aa10.33□□□□□ -0.76
RIF1-208ENST00000457745 NCOA7Q8NI08 942 aa10.33□□□□□ -0.76
RIF1-208ENST00000457745 TEKT1Q969V4 418 aa10.33□□□□□ -0.76
RIF1-208ENST00000457745 SCUBE2Q9NQ36 999 aa10.33□□□□□ -0.76
RIF1-208ENST00000457745 ATP8A2Q9NTI2 1148 aa10.33□□□□□ -0.76
RIF1-208ENST00000457745 FAM217BQ9NTX9 383 aaPredicted RBP10.33□□□□□ -0.76
RIF1-208ENST00000457745 CNTNAP1P78357 1384 aa10.33□□□□□ -0.76
RIF1-208ENST00000457745 MYH8P13535 1937 aa10.33□□□□□ -0.76
RIF1-208ENST00000457745 RASA1P20936 1047 aa10.32□□□□□ -0.76
RIF1-208ENST00000457745 PDIA3P30101 505 aaKnown RBP10.32□□□□□ -0.76
RIF1-208ENST00000457745 GMPSP49915 693 aaPredicted RBP10.32□□□□□ -0.76
RIF1-208ENST00000457745 EVCP57679 992 aa10.32□□□□□ -0.76
RIF1-208ENST00000457745 CCT2P78371 535 aaKnown RBP10.32□□□□□ -0.76
RIF1-208ENST00000457745 JAG1P78504 1218 aa10.32□□□□□ -0.76
RIF1-208ENST00000457745 GABPAQ06546 454 aa10.32□□□□□ -0.76
RIF1-208ENST00000457745 GRIPAP1Q4V328 841 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 225.4 ms