RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 MAP3K9P80192 1104 aa16.94■□□□□ 0.3
SMPD4-215ENST00000457039 EVX2Q03828 476 aa16.94■□□□□ 0.3
SMPD4-215ENST00000457039 CWC27Q6UX04 472 aaKnown RBP16.94■□□□□ 0.3
SMPD4-215ENST00000457039 TTC6Q86TZ1 520 aa16.94■□□□□ 0.3
SMPD4-215ENST00000457039 FOXP4Q8IVH2 680 aaPredicted RBP16.94■□□□□ 0.3
SMPD4-215ENST00000457039 ANKRD13AQ8IZ07 590 aa16.94■□□□□ 0.3
SMPD4-215ENST00000457039 WRNIP1Q96S55 665 aa16.94■□□□□ 0.3
SMPD4-215ENST00000457039 IL25Q9H293 177 aa16.94■□□□□ 0.3
SMPD4-215ENST00000457039 CCDC171Q6TFL3 1326 aa16.94■□□□□ 0.3
SMPD4-215ENST00000457039 FAM155AB1AL88 458 aaPredicted RBP16.93■□□□□ 0.3
SMPD4-215ENST00000457039 USP17L12C9JPN9 530 aa16.93■□□□□ 0.3
SMPD4-215ENST00000457039 USP17L21D6R901 530 aa16.93■□□□□ 0.3
SMPD4-215ENST00000457039 POLR3DP05423 398 aaPredicted RBP16.93■□□□□ 0.3
SMPD4-215ENST00000457039 CYP2D6P10635 497 aa16.93■□□□□ 0.3
SMPD4-215ENST00000457039 INPP5BP32019 993 aa16.93■□□□□ 0.3
SMPD4-215ENST00000457039 GABPAQ06546 454 aa16.93■□□□□ 0.3
SMPD4-215ENST00000457039 VGLL4Q14135 290 aa16.93■□□□□ 0.3
SMPD4-215ENST00000457039 SLC4A8Q2Y0W8 1093 aa16.93■□□□□ 0.3
SMPD4-215ENST00000457039 SBK1Q52WX2 424 aa16.93■□□□□ 0.3
SMPD4-215ENST00000457039 C12orf60Q5U649 245 aa16.93■□□□□ 0.3
SMPD4-215ENST00000457039 VPS53Q5VIR6 699 aa16.93■□□□□ 0.3
SMPD4-215ENST00000457039 CYP4F22Q6NT55 531 aa16.93■□□□□ 0.3
SMPD4-215ENST00000457039 CTR9Q6PD62 1173 aa16.93■□□□□ 0.3
SMPD4-215ENST00000457039 IFNL3Q8IZI9 196 aa16.93■□□□□ 0.3
SMPD4-215ENST00000457039 CLMNQ96JQ2 1002 aa16.93■□□□□ 0.3
SMPD4-215ENST00000457039 SERPINB13Q9UIV8 391 aa16.93■□□□□ 0.3
SMPD4-215ENST00000457039 BAZ2AQ9UIF9 1905 aaKnown RBP16.93■□□□□ 0.3
SMPD4-215ENST00000457039 SMIM22K7EJ46 135 aa16.92■□□□□ 0.3
SMPD4-215ENST00000457039 SLC10A3P09131 477 aa16.92■□□□□ 0.3
SMPD4-215ENST00000457039 VEGFBP49765 207 aa16.92■□□□□ 0.3
SMPD4-215ENST00000457039 RRP1BQ14684 758 aaKnown RBP16.92■□□□□ 0.3
SMPD4-215ENST00000457039 NOL9Q5SY16 702 aaKnown RBP16.92■□□□□ 0.3
SMPD4-215ENST00000457039 RASAL3Q86YV0 1011 aa16.92■□□□□ 0.3
SMPD4-215ENST00000457039 ZKSCAN4Q969J2 545 aaPredicted RBP16.92■□□□□ 0.3
SMPD4-215ENST00000457039 DDRGK1Q96HY6 314 aa16.92■□□□□ 0.3
SMPD4-215ENST00000457039 CAPNS2Q96L46 248 aa16.92■□□□□ 0.3
SMPD4-215ENST00000457039 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.92■□□□□ 0.3
SMPD4-215ENST00000457039 ARPP21Q9UBL0 812 aaPredicted RBP16.92■□□□□ 0.3
SMPD4-215ENST00000457039 SNCAIPQ9Y6H5 919 aa16.92■□□□□ 0.3
SMPD4-215ENST00000457039 RAD50Q92878 1312 aa16.92■□□□□ 0.3
SMPD4-215ENST00000457039 CYP2D7A0A087X1C5 515 aa16.91■□□□□ 0.3
SMPD4-215ENST00000457039 HSPD1P10809 573 aaKnown RBP16.91■□□□□ 0.3
SMPD4-215ENST00000457039 ZNF157P51786 506 aaPredicted RBP16.91■□□□□ 0.3
SMPD4-215ENST00000457039 ALX1Q15699 326 aa16.91■□□□□ 0.3
SMPD4-215ENST00000457039 TATDN1Q6P1N9 297 aa16.91■□□□□ 0.3
SMPD4-215ENST00000457039 TAOK2Q9UL54 1235 aa16.91■□□□□ 0.3
SMPD4-215ENST00000457039 WDR33Q9C0J8 1336 aaKnown RBP16.91■□□□□ 0.3
SMPD4-215ENST00000457039 THSD7BQ9C0I4 1608 aa16.9■□□□□ 0.3
SMPD4-215ENST00000457039 APPP05067 770 aa16.9■□□□□ 0.3
SMPD4-215ENST00000457039 ECE1P42892 770 aa16.9■□□□□ 0.3
SMPD4-215ENST00000457039 MFAP1P55081 439 aaKnown RBP16.9■□□□□ 0.3
SMPD4-215ENST00000457039 CRACR2BQ8N4Y2 399 aaPredicted RBP16.9■□□□□ 0.3
SMPD4-215ENST00000457039 CCDC102AQ96A19 550 aa16.9■□□□□ 0.3
SMPD4-215ENST00000457039 NACAP1Q9BZK3 213 aa16.9■□□□□ 0.3
SMPD4-215ENST00000457039 ELP3Q9H9T3 547 aa16.9■□□□□ 0.3
SMPD4-215ENST00000457039 CSADQ9Y600 493 aa16.9■□□□□ 0.3
SMPD4-215ENST00000457039 ROBO3Q96MS0 1386 aa16.89■□□□□ 0.3
SMPD4-215ENST00000457039 SGSM2O43147 1006 aa16.89■□□□□ 0.29
SMPD4-215ENST00000457039 CTNND1O60716 968 aaKnown RBP16.89■□□□□ 0.29
SMPD4-215ENST00000457039 SHMT1P34896 483 aa16.89■□□□□ 0.29
SMPD4-215ENST00000457039 GJA5P36382 358 aa16.89■□□□□ 0.29
SMPD4-215ENST00000457039 TDO2P48775 406 aa16.89■□□□□ 0.29
SMPD4-215ENST00000457039 PAXIP1Q6ZW49 1069 aaPredicted RBP16.89■□□□□ 0.29
SMPD4-215ENST00000457039 SCYL3Q8IZE3 742 aa16.89■□□□□ 0.29
SMPD4-215ENST00000457039 SLC10A4Q96EP9 437 aa16.89■□□□□ 0.29
SMPD4-215ENST00000457039 DYNLL2Q96FJ2 89 aa16.89■□□□□ 0.29
SMPD4-215ENST00000457039 WNK4Q96J92 1243 aa16.89■□□□□ 0.29
SMPD4-215ENST00000457039 NAPBQ9H115 298 aa16.89■□□□□ 0.29
SMPD4-215ENST00000457039 ZMYM6O95789 1325 aa16.89■□□□□ 0.29
SMPD4-215ENST00000457039 LAMB1P07942 1786 aa16.88■□□□□ 0.29
SMPD4-215ENST00000457039 SPDYE5A6NIY4 337 aa16.88■□□□□ 0.29
SMPD4-215ENST00000457039 CAP2P40123 477 aa16.88■□□□□ 0.29
SMPD4-215ENST00000457039 JAG1P78504 1218 aa16.88■□□□□ 0.29
SMPD4-215ENST00000457039 SPRYD7Q5W111 196 aa16.88■□□□□ 0.29
SMPD4-215ENST00000457039 C16orf86Q6ZW13 317 aa16.88■□□□□ 0.29
SMPD4-215ENST00000457039 AMOTL1Q8IY63 956 aa16.88■□□□□ 0.29
SMPD4-215ENST00000457039 SLC44A5Q8NCS7 719 aa16.88■□□□□ 0.29
SMPD4-215ENST00000457039 RUFY2Q8WXA3 655 aa16.88■□□□□ 0.29
SMPD4-215ENST00000457039 CNKSR2Q8WXI2 1034 aa16.88■□□□□ 0.29
SMPD4-215ENST00000457039 DOCK1Q14185 1865 aa16.88■□□□□ 0.29
SMPD4-215ENST00000457039 AOC2O75106 756 aa16.87■□□□□ 0.29
SMPD4-215ENST00000457039 FGAP02671 866 aa16.87■□□□□ 0.29
SMPD4-215ENST00000457039 NOGQ13253 232 aa16.87■□□□□ 0.29
SMPD4-215ENST00000457039 ERO1BQ86YB8 467 aa16.87■□□□□ 0.29
SMPD4-215ENST00000457039 OPTNQ96CV9 577 aa16.87■□□□□ 0.29
SMPD4-215ENST00000457039 ZIC5Q96T25 663 aa16.87■□□□□ 0.29
SMPD4-215ENST00000457039 DSCC1Q9BVC3 393 aa16.87■□□□□ 0.29
SMPD4-215ENST00000457039 TRIM34Q9BYJ4 488 aa16.87■□□□□ 0.29
SMPD4-215ENST00000457039 SWAP70Q9UH65 585 aa16.87■□□□□ 0.29
SMPD4-215ENST00000457039 MINDY4BA8MYZ0 360 aa16.86■□□□□ 0.29
SMPD4-215ENST00000457039 CDC45O75419 566 aa16.86■□□□□ 0.29
SMPD4-215ENST00000457039 ZBTB48P10074 688 aaPredicted RBP16.86■□□□□ 0.29
SMPD4-215ENST00000457039 PTPRAP18433 802 aa16.86■□□□□ 0.29
SMPD4-215ENST00000457039 CDK8P49336 464 aa16.86■□□□□ 0.29
SMPD4-215ENST00000457039 PPATQ06203 517 aa16.86■□□□□ 0.29
SMPD4-215ENST00000457039 PPARAQ07869 468 aa16.86■□□□□ 0.29
SMPD4-215ENST00000457039 GRM1Q13255 1194 aa16.86■□□□□ 0.29
SMPD4-215ENST00000457039 SHROOM1Q2M3G4 852 aaPredicted RBP16.86■□□□□ 0.29
SMPD4-215ENST00000457039 ESYT1Q9BSJ8 1104 aa16.86■□□□□ 0.29
SMPD4-215ENST00000457039 GDF11O95390 407 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms