RNA–Protein interactions for RNA: ENST00000456312.5

SBDSP1-205, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 5

Gene SBDSP1, Length 963 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-205ENST00000456312 MIGA2Q7L4E1 593 aa22.35■■□□□ 1.17
SBDSP1-205ENST00000456312 ZSCAN29Q8IWY8 852 aaPredicted RBP22.35■■□□□ 1.17
SBDSP1-205ENST00000456312 IFNL3Q8IZI9 196 aa22.35■■□□□ 1.17
SBDSP1-205ENST00000456312 MCM9Q9NXL9 1143 aa22.35■■□□□ 1.17
SBDSP1-205ENST00000456312 ANGEL1Q9UNK9 670 aaKnown RBP22.35■■□□□ 1.17
SBDSP1-205ENST00000456312 ROBO3Q96MS0 1386 aa22.35■■□□□ 1.17
SBDSP1-205ENST00000456312 ZMYM6O95789 1325 aa22.34■■□□□ 1.17
SBDSP1-205ENST00000456312 UNCXA6NJT0 531 aa22.34■■□□□ 1.17
SBDSP1-205ENST00000456312 UBE2Q2LH0YL09 131 aa22.34■■□□□ 1.17
SBDSP1-205ENST00000456312 CYP2D6P10635 497 aa22.34■■□□□ 1.17
SBDSP1-205ENST00000456312 HSPD1P10809 573 aaKnown RBP22.34■■□□□ 1.17
SBDSP1-205ENST00000456312 PRKG1Q13976 671 aa22.34■■□□□ 1.17
SBDSP1-205ENST00000456312 C12orf60Q5U649 245 aa22.34■■□□□ 1.17
SBDSP1-205ENST00000456312 CTR9Q6PD62 1173 aa22.34■■□□□ 1.17
SBDSP1-205ENST00000456312 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.34■■□□□ 1.17
SBDSP1-205ENST00000456312 ZNF341Q9BYN7 854 aa22.34■■□□□ 1.17
SBDSP1-205ENST00000456312 HERC5Q9UII4 1024 aaKnown RBP22.34■■□□□ 1.17
SBDSP1-205ENST00000456312 FAM196BA6NMK8 535 aa22.33■■□□□ 1.17
SBDSP1-205ENST00000456312 USP17L12C9JPN9 530 aa22.33■■□□□ 1.17
SBDSP1-205ENST00000456312 USP17L21D6R901 530 aa22.33■■□□□ 1.17
SBDSP1-205ENST00000456312 SGSM2O43147 1006 aa22.33■■□□□ 1.17
SBDSP1-205ENST00000456312 RRP1BQ14684 758 aaKnown RBP22.33■■□□□ 1.17
SBDSP1-205ENST00000456312 ALX1Q15699 326 aa22.33■■□□□ 1.17
SBDSP1-205ENST00000456312 ARMC9Q7Z3E5 817 aa22.33■■□□□ 1.17
SBDSP1-205ENST00000456312 FOXP4Q8IVH2 680 aaPredicted RBP22.33■■□□□ 1.17
SBDSP1-205ENST00000456312 CYP2D7A0A087X1C5 515 aa22.32■■□□□ 1.16
SBDSP1-205ENST00000456312 HUNKP57058 714 aa22.32■■□□□ 1.16
SBDSP1-205ENST00000456312 SLC4A8Q2Y0W8 1093 aa22.32■■□□□ 1.16
SBDSP1-205ENST00000456312 TTC6Q86TZ1 520 aa22.32■■□□□ 1.16
SBDSP1-205ENST00000456312 ARPP21Q9UBL0 812 aaPredicted RBP22.32■■□□□ 1.16
SBDSP1-205ENST00000456312 HLA-DOAP06340 250 aa22.31■■□□□ 1.16
SBDSP1-205ENST00000456312 INPP5BP32019 993 aa22.31■■□□□ 1.16
SBDSP1-205ENST00000456312 IREB2P48200 963 aaKnown RBP22.31■■□□□ 1.16
SBDSP1-205ENST00000456312 NOL9Q5SY16 702 aaKnown RBP22.31■■□□□ 1.16
SBDSP1-205ENST00000456312 TATDN1Q6P1N9 297 aa22.31■■□□□ 1.16
SBDSP1-205ENST00000456312 CLMNQ96JQ2 1002 aa22.31■■□□□ 1.16
SBDSP1-205ENST00000456312 SERPINB13Q9UIV8 391 aa22.31■■□□□ 1.16
SBDSP1-205ENST00000456312 TAOK2Q9UL54 1235 aa22.31■■□□□ 1.16
SBDSP1-205ENST00000456312 ABT1Q9ULW3 272 aaKnown RBP22.31■■□□□ 1.16
SBDSP1-205ENST00000456312 FAM155AB1AL88 458 aaPredicted RBP22.3■■□□□ 1.16
SBDSP1-205ENST00000456312 MAP3K9P80192 1104 aa22.3■■□□□ 1.16
SBDSP1-205ENST00000456312 VGLL4Q14135 290 aa22.3■■□□□ 1.16
SBDSP1-205ENST00000456312 ANKRD13AQ8IZ07 590 aa22.3■■□□□ 1.16
SBDSP1-205ENST00000456312 WRNIP1Q96S55 665 aa22.3■■□□□ 1.16
SBDSP1-205ENST00000456312 SNCAIPQ9Y6H5 919 aa22.3■■□□□ 1.16
SBDSP1-205ENST00000456312 POLR3DP05423 398 aaPredicted RBP22.29■■□□□ 1.16
SBDSP1-205ENST00000456312 SHMT1P34896 483 aa22.29■■□□□ 1.16
SBDSP1-205ENST00000456312 MFAP1P55081 439 aaKnown RBP22.29■■□□□ 1.16
SBDSP1-205ENST00000456312 TTLL12Q14166 644 aaPredicted RBP22.29■■□□□ 1.16
SBDSP1-205ENST00000456312 DNAJC5GQ8N7S2 189 aa22.29■■□□□ 1.16
SBDSP1-205ENST00000456312 RUFY2Q8WXA3 655 aa22.29■■□□□ 1.16
SBDSP1-205ENST00000456312 ESYT1Q9BSJ8 1104 aa22.29■■□□□ 1.16
SBDSP1-205ENST00000456312 DSCC1Q9BVC3 393 aa22.29■■□□□ 1.16
SBDSP1-205ENST00000456312 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.29■■□□□ 1.16
SBDSP1-205ENST00000456312 CDC45O75419 566 aa22.28■■□□□ 1.16
SBDSP1-205ENST00000456312 FGAP02671 866 aa22.28■■□□□ 1.16
SBDSP1-205ENST00000456312 RGMBQ6NW40 437 aa22.28■■□□□ 1.16
SBDSP1-205ENST00000456312 C16orf86Q6ZW13 317 aa22.28■■□□□ 1.16
SBDSP1-205ENST00000456312 RASAL3Q86YV0 1011 aa22.28■■□□□ 1.16
SBDSP1-205ENST00000456312 ZKSCAN4Q969J2 545 aaPredicted RBP22.28■■□□□ 1.16
SBDSP1-205ENST00000456312 PCNTO95613 3336 aa22.28■■□□□ 1.16
SBDSP1-205ENST00000456312 SLC10A3P09131 477 aa22.27■■□□□ 1.16
SBDSP1-205ENST00000456312 TDO2P48775 406 aa22.27■■□□□ 1.16
SBDSP1-205ENST00000456312 JAG1P78504 1218 aa22.27■■□□□ 1.16
SBDSP1-205ENST00000456312 DEFB115Q30KQ5 88 aa22.27■■□□□ 1.16
SBDSP1-205ENST00000456312 SLC44A5Q8NCS7 719 aa22.27■■□□□ 1.16
SBDSP1-205ENST00000456312 DYNLL2Q96FJ2 89 aa22.27■■□□□ 1.16
SBDSP1-205ENST00000456312 DDRGK1Q96HY6 314 aa22.27■■□□□ 1.16
SBDSP1-205ENST00000456312 NACAP1Q9BZK3 213 aa22.27■■□□□ 1.16
SBDSP1-205ENST00000456312 NAPBQ9H115 298 aa22.27■■□□□ 1.16
SBDSP1-205ENST00000456312 ANAPC4Q9UJX5 808 aa22.27■■□□□ 1.16
SBDSP1-205ENST00000456312 TACC3Q9Y6A5 838 aa22.27■■□□□ 1.16
SBDSP1-205ENST00000456312 MYH4Q9Y623 1939 aa22.27■■□□□ 1.16
SBDSP1-205ENST00000456312 LOC285556D6RIA3 1793 aa22.27■■□□□ 1.16
SBDSP1-205ENST00000456312 CTNND1O60716 968 aaKnown RBP22.26■■□□□ 1.15
SBDSP1-205ENST00000456312 APPP05067 770 aa22.26■■□□□ 1.15
SBDSP1-205ENST00000456312 GJA5P36382 358 aa22.26■■□□□ 1.15
SBDSP1-205ENST00000456312 CAP2P40123 477 aa22.26■■□□□ 1.15
SBDSP1-205ENST00000456312 PTH1RQ03431 593 aa22.26■■□□□ 1.15
SBDSP1-205ENST00000456312 SHROOM1Q2M3G4 852 aaPredicted RBP22.26■■□□□ 1.15
SBDSP1-205ENST00000456312 PPARAQ07869 468 aa22.25■■□□□ 1.15
SBDSP1-205ENST00000456312 CYP4F22Q6NT55 531 aa22.25■■□□□ 1.15
SBDSP1-205ENST00000456312 SCYL3Q8IZE3 742 aa22.25■■□□□ 1.15
SBDSP1-205ENST00000456312 NBPF3Q9H094 633 aa22.25■■□□□ 1.15
SBDSP1-205ENST00000456312 SWAP70Q9UH65 585 aa22.25■■□□□ 1.15
SBDSP1-205ENST00000456312 SPDYE5A6NIY4 337 aa22.24■■□□□ 1.15
SBDSP1-205ENST00000456312 FGRP09769 529 aa22.24■■□□□ 1.15
SBDSP1-205ENST00000456312 CDK8P49336 464 aa22.24■■□□□ 1.15
SBDSP1-205ENST00000456312 CRACR2BQ8N4Y2 399 aaPredicted RBP22.24■■□□□ 1.15
SBDSP1-205ENST00000456312 CNKSR2Q8WXI2 1034 aa22.24■■□□□ 1.15
SBDSP1-205ENST00000456312 LSG1Q9H089 658 aaKnown RBP22.24■■□□□ 1.15
SBDSP1-205ENST00000456312 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.24■■□□□ 1.15
SBDSP1-205ENST00000456312 MINDY4BA8MYZ0 360 aa22.23■■□□□ 1.15
SBDSP1-205ENST00000456312 VEGFBP49765 207 aa22.23■■□□□ 1.15
SBDSP1-205ENST00000456312 WNK4Q96J92 1243 aa22.23■■□□□ 1.15
SBDSP1-205ENST00000456312 CAPNS2Q96L46 248 aa22.23■■□□□ 1.15
SBDSP1-205ENST00000456312 ELP3Q9H9T3 547 aa22.23■■□□□ 1.15
SBDSP1-205ENST00000456312 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.23■■□□□ 1.15
SBDSP1-205ENST00000456312 ZNF157P51786 506 aaPredicted RBP22.22■■□□□ 1.15
SBDSP1-205ENST00000456312 SPRYD7Q5W111 196 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms