RNA–Protein interactions for RNA: ENST00000454608.3

USP41-202, Transcript of ubiquitin specific peptidase 41, humanhuman

APPRIS P5 TSL 5 BASIC

Gene USP41, Length 1,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-202ENST00000454608 MORF4L1Q9UBU8 362 aa13.01□□□□□ -0.33
USP41-202ENST00000454608 GAKO14976 1311 aa13.01□□□□□ -0.33
USP41-202ENST00000454608 MAST2Q6P0Q8 1798 aa13.01□□□□□ -0.33
USP41-202ENST00000454608 DDTLA6NHG4 134 aaPredicted RBP13□□□□□ -0.33
USP41-202ENST00000454608 PRKAR2AP13861 404 aaKnown RBP13□□□□□ -0.33
USP41-202ENST00000454608 MDM2Q00987 491 aaPredicted RBP13□□□□□ -0.33
USP41-202ENST00000454608 SPP2Q13103 211 aa13□□□□□ -0.33
USP41-202ENST00000454608 ZNF280CQ8ND82 737 aa13□□□□□ -0.33
USP41-202ENST00000454608 FAM163AQ96GL9 167 aaPredicted RBP13□□□□□ -0.33
USP41-202ENST00000454608 LBHD1Q9BQE6 289 aaPredicted RBP13□□□□□ -0.33
USP41-202ENST00000454608 NPM3O75607 178 aaKnown RBP12.99□□□□□ -0.33
USP41-202ENST00000454608 CYP2B6P20813 491 aa12.99□□□□□ -0.33
USP41-202ENST00000454608 SH3D19Q5HYK7 790 aa12.99□□□□□ -0.33
USP41-202ENST00000454608 ASCC2Q9H1I8 757 aaPredicted RBP12.99□□□□□ -0.33
USP41-202ENST00000454608 AS3MTQ9HBK9 375 aa12.99□□□□□ -0.33
USP41-202ENST00000454608 FBXO3Q9UK99 471 aa12.99□□□□□ -0.33
USP41-202ENST00000454608 HMGCS2P54868 508 aa12.98□□□□□ -0.33
USP41-202ENST00000454608 PICALMQ13492 652 aa12.98□□□□□ -0.33
USP41-202ENST00000454608 ATP2B3Q16720 1220 aa12.98□□□□□ -0.33
USP41-202ENST00000454608 LRRC26Q2I0M4 334 aa12.98□□□□□ -0.33
USP41-202ENST00000454608 CCDC84Q86UT8 332 aaPredicted RBP12.98□□□□□ -0.33
USP41-202ENST00000454608 DZIP1Q86YF9 867 aaKnown RBP12.98□□□□□ -0.33
USP41-202ENST00000454608 SYMPKQ92797 1274 aaKnown RBP12.98□□□□□ -0.33
USP41-202ENST00000454608 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.98□□□□□ -0.33
USP41-202ENST00000454608 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.98□□□□□ -0.33
USP41-202ENST00000454608 LTBP2Q14767 1821 aa12.97□□□□□ -0.33
USP41-202ENST00000454608 VCANP13611 3396 aa12.97□□□□□ -0.33
USP41-202ENST00000454608 PDS5AQ29RF7 1337 aaKnown RBP12.97□□□□□ -0.33
USP41-202ENST00000454608 USP17L5A8MUK1 530 aa12.97□□□□□ -0.33
USP41-202ENST00000454608 MAP4K4O95819 1239 aaPredicted RBP12.97□□□□□ -0.33
USP41-202ENST00000454608 ZKSCAN1P17029 563 aaPredicted RBP12.97□□□□□ -0.33
USP41-202ENST00000454608 MAPK4P31152 587 aa12.97□□□□□ -0.33
USP41-202ENST00000454608 RFX5P48382 616 aaPredicted RBP12.97□□□□□ -0.33
USP41-202ENST00000454608 IRX3P78415 501 aaPredicted RBP12.97□□□□□ -0.33
USP41-202ENST00000454608 CACNB2Q08289 660 aaPredicted RBP12.97□□□□□ -0.33
USP41-202ENST00000454608 PDE3AQ14432 1141 aa12.97□□□□□ -0.33
USP41-202ENST00000454608 SPTY2D1Q68D10 685 aaPredicted RBP12.97□□□□□ -0.33
USP41-202ENST00000454608 LHX8Q68G74 356 aa12.97□□□□□ -0.33
USP41-202ENST00000454608 FAM161BQ96MY7 647 aa12.97□□□□□ -0.33
USP41-202ENST00000454608 DDX4Q9NQI0 724 aaKnown RBP12.97□□□□□ -0.33
USP41-202ENST00000454608 CIAO1O76071 339 aa12.96□□□□□ -0.33
USP41-202ENST00000454608 HOXA7P31268 230 aaPredicted RBP12.96□□□□□ -0.33
USP41-202ENST00000454608 CAP2P40123 477 aa12.96□□□□□ -0.33
USP41-202ENST00000454608 RGS2P41220 211 aa12.96□□□□□ -0.33
USP41-202ENST00000454608 BTDP43251 543 aa12.96□□□□□ -0.33
USP41-202ENST00000454608 ATG9AQ7Z3C6 839 aa12.96□□□□□ -0.33
USP41-202ENST00000454608 GPRC5AQ8NFJ5 357 aa12.96□□□□□ -0.33
USP41-202ENST00000454608 MAFAQ8NHW3 353 aaPredicted RBP12.96□□□□□ -0.33
USP41-202ENST00000454608 GTF3C2Q8WUA4 911 aaPredicted RBP12.96□□□□□ -0.33
USP41-202ENST00000454608 CDX2Q99626 313 aaPredicted RBP12.96□□□□□ -0.33
USP41-202ENST00000454608 CEP126Q9P2H0 1117 aa12.96□□□□□ -0.33
USP41-202ENST00000454608 PRKAG2Q9UGJ0 569 aa12.96□□□□□ -0.33
USP41-202ENST00000454608 MROH7-TTC4A0A0A0MT08 1334 aa12.95□□□□□ -0.34
USP41-202ENST00000454608 GPR75-ASB3A0A0A6YYF3 556 aa12.95□□□□□ -0.34
USP41-202ENST00000454608 SLURP2P0DP57 97 aa12.95□□□□□ -0.34
USP41-202ENST00000454608 CCND3P30281 292 aaPredicted RBP12.95□□□□□ -0.34
USP41-202ENST00000454608 USP6NLQ92738 828 aa12.95□□□□□ -0.34
USP41-202ENST00000454608 USP44Q9H0E7 712 aa12.95□□□□□ -0.34
USP41-202ENST00000454608 TMOD4Q9NZQ9 345 aa12.95□□□□□ -0.34
USP41-202ENST00000454608 ABCF2Q9UG63 623 aa12.95□□□□□ -0.34
USP41-202ENST00000454608 HERC5Q9UII4 1024 aaKnown RBP12.95□□□□□ -0.34
USP41-202ENST00000454608 PTPRCP08575 1304 aa12.94□□□□□ -0.34
USP41-202ENST00000454608 RLFQ13129 1914 aa12.94□□□□□ -0.34
USP41-202ENST00000454608 C19orf81C9J6K1 198 aa12.94□□□□□ -0.34
USP41-202ENST00000454608 MSCO60682 206 aa12.94□□□□□ -0.34
USP41-202ENST00000454608 PHKA1P46020 1223 aa12.94□□□□□ -0.34
USP41-202ENST00000454608 BACE1P56817 501 aa12.94□□□□□ -0.34
USP41-202ENST00000454608 RHBDL3P58872 404 aa12.94□□□□□ -0.34
USP41-202ENST00000454608 HERVK_113P62684 666 aa12.94□□□□□ -0.34
USP41-202ENST00000454608 CCAR1Q8IX12 1150 aaKnown RBP12.94□□□□□ -0.34
USP41-202ENST00000454608 APBA2Q99767 749 aa12.94□□□□□ -0.34
USP41-202ENST00000454608 WDR18Q9BV38 432 aa12.94□□□□□ -0.34
USP41-202ENST00000454608 SENP6Q9GZR1 1112 aaPredicted RBP12.94□□□□□ -0.34
USP41-202ENST00000454608 SEMA6BQ9H3T3 888 aa12.94□□□□□ -0.34
USP41-202ENST00000454608 SPTBN5Q9NRC6 3674 aaKnown RBP12.93□□□□□ -0.34
USP41-202ENST00000454608 FAM196BA6NMK8 535 aa12.93□□□□□ -0.34
USP41-202ENST00000454608 CCDC102BQ68D86 513 aa12.93□□□□□ -0.34
USP41-202ENST00000454608 GPR142Q7Z601 462 aa12.93□□□□□ -0.34
USP41-202ENST00000454608 P2RX7Q99572 595 aaKnown RBP12.93□□□□□ -0.34
USP41-202ENST00000454608 TXNRD2Q9NNW7 524 aa12.93□□□□□ -0.34
USP41-202ENST00000454608 SALL2Q9Y467 1007 aaPredicted RBP12.93□□□□□ -0.34
USP41-202ENST00000454608 GLRX3O76003 335 aaKnown RBP12.92□□□□□ -0.34
USP41-202ENST00000454608 LDHCP07864 332 aa12.92□□□□□ -0.34
USP41-202ENST00000454608 ASNSP08243 561 aa12.92□□□□□ -0.34
USP41-202ENST00000454608 IL15P40933 162 aaPredicted RBP12.92□□□□□ -0.34
USP41-202ENST00000454608 ERVK-9P63128 1117 aa12.92□□□□□ -0.34
USP41-202ENST00000454608 ERVK-24P63145 666 aa12.92□□□□□ -0.34
USP41-202ENST00000454608 GSTO1P78417 241 aa12.92□□□□□ -0.34
USP41-202ENST00000454608 SMAD3P84022 425 aaKnown RBP12.92□□□□□ -0.34
USP41-202ENST00000454608 MTMR2Q13614 643 aa12.92□□□□□ -0.34
USP41-202ENST00000454608 CCDC184Q52MB2 194 aa12.92□□□□□ -0.34
USP41-202ENST00000454608 MORN1Q5T089 497 aa12.92□□□□□ -0.34
USP41-202ENST00000454608 ERICH6Q7L0X2 663 aa12.92□□□□□ -0.34
USP41-202ENST00000454608 PLEKHH3Q7Z736 793 aa12.92□□□□□ -0.34
USP41-202ENST00000454608 LPAR1Q92633 364 aa12.92□□□□□ -0.34
USP41-202ENST00000454608 GINM1Q9NU53 330 aa12.92□□□□□ -0.34
USP41-202ENST00000454608 RBPJLQ9UBG7 517 aa12.92□□□□□ -0.34
USP41-202ENST00000454608 LAMA2P24043 3122 aaKnown RBP12.91□□□□□ -0.34
USP41-202ENST00000454608 EYSQ5T1H1 3165 aa12.91□□□□□ -0.34
USP41-202ENST00000454608 DNM1LO00429 736 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms