RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 SLC10A6Q3KNW5 377 aa5.9□□□□□ -1.46
HMGN3P1-201ENST00000453847 VHLLQ6RSH7 139 aa5.9□□□□□ -1.46
HMGN3P1-201ENST00000453847 SV2AQ7L0J3 742 aa5.9□□□□□ -1.46
HMGN3P1-201ENST00000453847 NLRC3Q7RTR2 1065 aa5.9□□□□□ -1.46
HMGN3P1-201ENST00000453847 C12orf40Q86WS4 652 aa5.9□□□□□ -1.46
HMGN3P1-201ENST00000453847 NUDT8Q8WV74 236 aa5.9□□□□□ -1.46
HMGN3P1-201ENST00000453847 SLC7A3Q8WY07 619 aa5.9□□□□□ -1.46
HMGN3P1-201ENST00000453847 IER2Q9BTL4 223 aa5.9□□□□□ -1.46
HMGN3P1-201ENST00000453847 KRT82Q9NSB4 513 aa5.9□□□□□ -1.46
HMGN3P1-201ENST00000453847 GMPR2Q9P2T1 348 aaKnown RBP5.9□□□□□ -1.46
HMGN3P1-201ENST00000453847 SUSD2Q9UGT4 822 aa5.9□□□□□ -1.46
HMGN3P1-201ENST00000453847 PCDHGC5Q9Y5F6 944 aa5.9□□□□□ -1.46
HMGN3P1-201ENST00000453847 FAM86C2PA6NEL3 165 aa5.89□□□□□ -1.47
HMGN3P1-201ENST00000453847 NEURL1BA8MQ27 555 aa5.89□□□□□ -1.47
HMGN3P1-201ENST00000453847 DCDC2CA8MYV0 355 aa5.89□□□□□ -1.47
HMGN3P1-201ENST00000453847 SUSD5O60279 629 aa5.89□□□□□ -1.47
HMGN3P1-201ENST00000453847 PLCG1P19174 1290 aa5.89□□□□□ -1.47
HMGN3P1-201ENST00000453847 POLR2BP30876 1174 aaKnown RBP5.89□□□□□ -1.47
HMGN3P1-201ENST00000453847 C19orf57Q0VDD7 668 aa5.89□□□□□ -1.47
HMGN3P1-201ENST00000453847 NCAPHQ15003 741 aa5.89□□□□□ -1.47
HMGN3P1-201ENST00000453847 KIF4BQ2VIQ3 1234 aa5.89□□□□□ -1.47
HMGN3P1-201ENST00000453847 ZC3H12AQ5D1E8 599 aaKnown RBP5.89□□□□□ -1.47
HMGN3P1-201ENST00000453847 KIAA1211LQ6NV74 962 aa5.89□□□□□ -1.47
HMGN3P1-201ENST00000453847 FOXR1Q6PIV2 292 aa5.89□□□□□ -1.47
HMGN3P1-201ENST00000453847 EEPD1Q7L9B9 569 aa5.89□□□□□ -1.47
HMGN3P1-201ENST00000453847 HDXQ7Z353 690 aa5.89□□□□□ -1.47
HMGN3P1-201ENST00000453847 THNSL2Q86YJ6 484 aa5.89□□□□□ -1.47
HMGN3P1-201ENST00000453847 DHX37Q8IY37 1157 aaKnown RBP5.89□□□□□ -1.47
HMGN3P1-201ENST00000453847 GPR161Q8N6U8 529 aaKnown RBP5.89□□□□□ -1.47
HMGN3P1-201ENST00000453847 ZSWIM2Q8NEG5 633 aa5.89□□□□□ -1.47
HMGN3P1-201ENST00000453847 DDX54Q8TDD1 881 aaKnown RBP5.89□□□□□ -1.47
HMGN3P1-201ENST00000453847 KISS1RQ969F8 398 aaPredicted RBP5.89□□□□□ -1.47
HMGN3P1-201ENST00000453847 ACSF2Q96CM8 615 aaPredicted RBP5.89□□□□□ -1.47
HMGN3P1-201ENST00000453847 KLHDC7BQ96G42 594 aa5.89□□□□□ -1.47
HMGN3P1-201ENST00000453847 CHPF2Q9P2E5 772 aa5.89□□□□□ -1.47
HMGN3P1-201ENST00000453847 ZNF214Q9UL59 606 aaPredicted RBP5.89□□□□□ -1.47
HMGN3P1-201ENST00000453847 G3BP2Q9UN86 482 aaKnown RBP5.89□□□□□ -1.47
HMGN3P1-201ENST00000453847 PPME1Q9Y570 386 aa5.89□□□□□ -1.47
HMGN3P1-201ENST00000453847 TACC3Q9Y6A5 838 aa5.89□□□□□ -1.47
HMGN3P1-201ENST00000453847 ELOA3CA0A087WX78 387 aaPredicted RBP5.88□□□□□ -1.47
HMGN3P1-201ENST00000453847 ELOA3DA6NLF2 546 aaPredicted RBP5.88□□□□□ -1.47
HMGN3P1-201ENST00000453847 RGS9O75916 674 aaPredicted RBP5.88□□□□□ -1.47
HMGN3P1-201ENST00000453847 CAPNS1P04632 268 aa5.88□□□□□ -1.47
HMGN3P1-201ENST00000453847 ADH6P28332 368 aa5.88□□□□□ -1.47
HMGN3P1-201ENST00000453847 L1CAMP32004 1257 aa5.88□□□□□ -1.47
HMGN3P1-201ENST00000453847 AFF1P51825 1210 aaKnown RBP5.88□□□□□ -1.47
HMGN3P1-201ENST00000453847 CABP4P57796 275 aa5.88□□□□□ -1.47
HMGN3P1-201ENST00000453847 PIP4K2BP78356 416 aa5.88□□□□□ -1.47
HMGN3P1-201ENST00000453847 LONRF2Q1L5Z9 754 aa5.88□□□□□ -1.47
HMGN3P1-201ENST00000453847 ELOA3BQ3SY89 546 aa5.88□□□□□ -1.47
HMGN3P1-201ENST00000453847 TMEM67Q5HYA8 995 aa5.88□□□□□ -1.47
HMGN3P1-201ENST00000453847 SYNPOQ8N3V7 929 aa5.88□□□□□ -1.47
HMGN3P1-201ENST00000453847 PRPF38AQ8NAV1 312 aaKnown RBP5.88□□□□□ -1.47
HMGN3P1-201ENST00000453847 ELOA3Q8NG57 546 aa5.88□□□□□ -1.47
HMGN3P1-201ENST00000453847 NINJ1Q92982 152 aa5.88□□□□□ -1.47
HMGN3P1-201ENST00000453847 KIFC2Q96AC6 838 aa5.88□□□□□ -1.47
HMGN3P1-201ENST00000453847 ACSBG1Q96GR2 724 aa5.88□□□□□ -1.47
HMGN3P1-201ENST00000453847 EXOC2Q96KP1 924 aa5.88□□□□□ -1.47
HMGN3P1-201ENST00000453847 CLUHP3Q96NS8 147 aa5.88□□□□□ -1.47
HMGN3P1-201ENST00000453847 CARD10Q9BWT7 1032 aa5.88□□□□□ -1.47
HMGN3P1-201ENST00000453847 PHAXQ9H814 394 aaKnown RBP5.88□□□□□ -1.47
HMGN3P1-201ENST00000453847 SENP2Q9HC62 589 aa5.88□□□□□ -1.47
HMGN3P1-201ENST00000453847 THRAP3Q9Y2W1 955 aaKnown RBP5.88□□□□□ -1.47
HMGN3P1-201ENST00000453847 CSADQ9Y600 493 aa5.88□□□□□ -1.47
HMGN3P1-201ENST00000453847 A0A1W2PQU0 124 aa5.87□□□□□ -1.47
HMGN3P1-201ENST00000453847 FSCN2O14926 492 aa5.87□□□□□ -1.47
HMGN3P1-201ENST00000453847 DDX3YO15523 660 aaKnown RBP5.87□□□□□ -1.47
HMGN3P1-201ENST00000453847 CYP11A1P05108 521 aa5.87□□□□□ -1.47
HMGN3P1-201ENST00000453847 MX2P20592 715 aa5.87□□□□□ -1.47
HMGN3P1-201ENST00000453847 GRK4P32298 578 aa5.87□□□□□ -1.47
HMGN3P1-201ENST00000453847 NTF4P34130 210 aa5.87□□□□□ -1.47
HMGN3P1-201ENST00000453847 PABPC4Q13310 644 aaKnown RBP eCLIP5.87□□□□□ -1.47
HMGN3P1-201ENST00000453847 YOD1Q5VVQ6 348 aaPredicted RBP5.87□□□□□ -1.47
HMGN3P1-201ENST00000453847 DIEXFQ68CQ4 756 aaKnown RBP5.87□□□□□ -1.47
HMGN3P1-201ENST00000453847 C1orf229Q6ZS94 237 aaPredicted RBP5.87□□□□□ -1.47
HMGN3P1-201ENST00000453847 C8orf86Q6ZUL3 223 aa5.87□□□□□ -1.47
HMGN3P1-201ENST00000453847 PPFIBP1Q86W92 1011 aa5.87□□□□□ -1.47
HMGN3P1-201ENST00000453847 RAVER1Q8IY67 606 aaKnown RBP5.87□□□□□ -1.47
HMGN3P1-201ENST00000453847 TMEM192Q8IY95 271 aa5.87□□□□□ -1.47
HMGN3P1-201ENST00000453847 CACTIN-AS1Q8N1I8 211 aa5.87□□□□□ -1.47
HMGN3P1-201ENST00000453847 ZNF513Q8N8E2 541 aaPredicted RBP5.87□□□□□ -1.47
HMGN3P1-201ENST00000453847 GALNT11Q8NCW6 608 aa5.87□□□□□ -1.47
HMGN3P1-201ENST00000453847 WNT8BQ93098 351 aa5.87□□□□□ -1.47
HMGN3P1-201ENST00000453847 CORO1BQ9BR76 489 aa5.87□□□□□ -1.47
HMGN3P1-201ENST00000453847 OSGEPQ9NPF4 335 aa5.87□□□□□ -1.47
HMGN3P1-201ENST00000453847 ARHGEF4Q9NR80 690 aa5.87□□□□□ -1.47
HMGN3P1-201ENST00000453847 TYW1Q9NV66 732 aaKnown RBP5.87□□□□□ -1.47
HMGN3P1-201ENST00000453847 GGA1Q9UJY5 639 aa5.87□□□□□ -1.47
HMGN3P1-201ENST00000453847 PLAAQ9Y263 795 aa5.87□□□□□ -1.47
HMGN3P1-201ENST00000453847 SLC12A7Q9Y666 1083 aa5.87□□□□□ -1.47
HMGN3P1-201ENST00000453847 FAM83GA6ND36 823 aa5.86□□□□□ -1.47
HMGN3P1-201ENST00000453847 ADAM11O75078 769 aa5.86□□□□□ -1.47
HMGN3P1-201ENST00000453847 RFPL3O75679 317 aa5.86□□□□□ -1.47
HMGN3P1-201ENST00000453847 ALBP02768 609 aa5.86□□□□□ -1.47
HMGN3P1-201ENST00000453847 SLC7A5Q01650 507 aa5.86□□□□□ -1.47
HMGN3P1-201ENST00000453847 FAM209AQ5JX71 171 aa5.86□□□□□ -1.47
HMGN3P1-201ENST00000453847 NIM1KQ8IY84 436 aa5.86□□□□□ -1.47
HMGN3P1-201ENST00000453847 WDR18Q9BV38 432 aa5.86□□□□□ -1.47
HMGN3P1-201ENST00000453847 WNT10AQ9GZT5 417 aa5.86□□□□□ -1.47
HMGN3P1-201ENST00000453847 TJP2Q9UDY2 1190 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms