RNA–Protein interactions for RNA: ENST00000453341.1

TNFRSF25-208, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-208ENST00000453341 SPP2Q13103 211 aa27.06■■□□□ 1.92
TNFRSF25-208ENST00000453341 ZGPATQ8N5A5 531 aaKnown RBP27.06■■□□□ 1.92
TNFRSF25-208ENST00000453341 SSH1Q8WYL5 1049 aa27.06■■□□□ 1.92
TNFRSF25-208ENST00000453341 C11orf49Q9H6J7 331 aa27.06■■□□□ 1.92
TNFRSF25-208ENST00000453341 HMX1Q9NP08 348 aaPredicted RBP27.06■■□□□ 1.92
TNFRSF25-208ENST00000453341 ATAD5Q96QE3 1844 aa27.06■■□□□ 1.92
TNFRSF25-208ENST00000453341 TBC1D12O60347 775 aa27.05■■□□□ 1.92
TNFRSF25-208ENST00000453341 RHBDL3P58872 404 aa27.05■■□□□ 1.92
TNFRSF25-208ENST00000453341 TDHQ8IZJ6 230 aa27.05■■□□□ 1.92
TNFRSF25-208ENST00000453341 TRIB2Q92519 343 aa27.05■■□□□ 1.92
TNFRSF25-208ENST00000453341 ABCF2Q9UG63 623 aa27.05■■□□□ 1.92
TNFRSF25-208ENST00000453341 OGDHLQ9ULD0 1010 aa27.05■■□□□ 1.92
TNFRSF25-208ENST00000453341 ZNF521Q96K83 1311 aa27.05■■□□□ 1.92
TNFRSF25-208ENST00000453341 GCLCP48506 637 aaPredicted RBP27.04■■□□□ 1.92
TNFRSF25-208ENST00000453341 HMGCS2P54868 508 aa27.04■■□□□ 1.92
TNFRSF25-208ENST00000453341 ZNF384Q8TF68 577 aa27.04■■□□□ 1.92
TNFRSF25-208ENST00000453341 ASCC2Q9H1I8 757 aaPredicted RBP27.04■■□□□ 1.92
TNFRSF25-208ENST00000453341 MROH7-TTC4A0A0A0MT08 1334 aa27.04■■□□□ 1.92
TNFRSF25-208ENST00000453341 PFASO15067 1338 aa27.03■■□□□ 1.92
TNFRSF25-208ENST00000453341 RRP1BQ14684 758 aaKnown RBP27.03■■□□□ 1.92
TNFRSF25-208ENST00000453341 ZNF280CQ8ND82 737 aa27.03■■□□□ 1.92
TNFRSF25-208ENST00000453341 OSBPL5Q9H0X9 879 aaPredicted RBP27.03■■□□□ 1.92
TNFRSF25-208ENST00000453341 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.03■■□□□ 1.92
TNFRSF25-208ENST00000453341 PA2G4Q9UQ80 394 aaKnown RBP27.03■■□□□ 1.92
TNFRSF25-208ENST00000453341 SLF2Q8IX21 1173 aa27.02■■□□□ 1.92
TNFRSF25-208ENST00000453341 PDS5AQ29RF7 1337 aaKnown RBP27.01■■□□□ 1.91
TNFRSF25-208ENST00000453341 GPR75-ASB3A0A0A6YYF3 556 aa27.01■■□□□ 1.91
TNFRSF25-208ENST00000453341 IL15P40933 162 aaPredicted RBP27.01■■□□□ 1.91
TNFRSF25-208ENST00000453341 MAP3K21Q5TCX8 1036 aa27.01■■□□□ 1.91
TNFRSF25-208ENST00000453341 UBE2OQ9C0C9 1292 aaKnown RBP27.01■■□□□ 1.91
TNFRSF25-208ENST00000453341 VCANP13611 3396 aa27.01■■□□□ 1.91
TNFRSF25-208ENST00000453341 MECOMQ03112 1051 aa27■■□□□ 1.91
TNFRSF25-208ENST00000453341 PEX10O60683 326 aa26.99■■□□□ 1.91
TNFRSF25-208ENST00000453341 NPM3O75607 178 aaKnown RBP26.99■■□□□ 1.91
TNFRSF25-208ENST00000453341 CYP2B6P20813 491 aa26.99■■□□□ 1.91
TNFRSF25-208ENST00000453341 TIMM10P62072 90 aa26.99■■□□□ 1.91
TNFRSF25-208ENST00000453341 PABPC4Q13310 644 aaKnown RBP eCLIP26.99■■□□□ 1.91
TNFRSF25-208ENST00000453341 SH3D19Q5HYK7 790 aa26.99■■□□□ 1.91
TNFRSF25-208ENST00000453341 MORF4L1Q9UBU8 362 aa26.99■■□□□ 1.91
TNFRSF25-208ENST00000453341 UBTFL1P0CB47 393 aaPredicted RBP26.98■■□□□ 1.91
TNFRSF25-208ENST00000453341 PRKAR2AP13861 404 aaKnown RBP26.98■■□□□ 1.91
TNFRSF25-208ENST00000453341 CAP2P40123 477 aa26.98■■□□□ 1.91
TNFRSF25-208ENST00000453341 SPTY2D1Q68D10 685 aaPredicted RBP26.98■■□□□ 1.91
TNFRSF25-208ENST00000453341 COL2A1P02458 1487 aaPredicted RBP26.98■■□□□ 1.91
TNFRSF25-208ENST00000453341 FAM9BQ8IZU0 186 aa26.97■■□□□ 1.91
TNFRSF25-208ENST00000453341 EYSQ5T1H1 3165 aa26.96■■□□□ 1.91
TNFRSF25-208ENST00000453341 USP17L5A8MUK1 530 aa26.96■■□□□ 1.91
TNFRSF25-208ENST00000453341 COL6A1P12109 1028 aa26.96■■□□□ 1.91
TNFRSF25-208ENST00000453341 COL25A1Q9BXS0 654 aaPredicted RBP26.96■■□□□ 1.91
TNFRSF25-208ENST00000453341 TBC1D2Q9BYX2 928 aa26.96■■□□□ 1.91
TNFRSF25-208ENST00000453341 ERICH6Q7L0X2 663 aa26.95■■□□□ 1.9
TNFRSF25-208ENST00000453341 TXNRD2Q9NNW7 524 aa26.95■■□□□ 1.9
TNFRSF25-208ENST00000453341 COPRSQ9NQ92 184 aa26.95■■□□□ 1.9
TNFRSF25-208ENST00000453341 SIPA1L1O43166 1804 aa26.95■■□□□ 1.9
TNFRSF25-208ENST00000453341 A0A1B0GUL7 405 aa26.93■■□□□ 1.9
TNFRSF25-208ENST00000453341 CACNB2Q08289 660 aaPredicted RBP26.93■■□□□ 1.9
TNFRSF25-208ENST00000453341 MTMR2Q13614 643 aa26.93■■□□□ 1.9
TNFRSF25-208ENST00000453341 LRRC26Q2I0M4 334 aa26.93■■□□□ 1.9
TNFRSF25-208ENST00000453341 PI16Q6UXB8 463 aa26.93■■□□□ 1.9
TNFRSF25-208ENST00000453341 NSUN4Q96CB9 384 aaKnown RBP26.93■■□□□ 1.9
TNFRSF25-208ENST00000453341 XAGE2Q96GT9 111 aa26.93■■□□□ 1.9
TNFRSF25-208ENST00000453341 P2RX7Q99572 595 aaKnown RBP26.93■■□□□ 1.9
TNFRSF25-208ENST00000453341 NUDT12Q9BQG2 462 aa26.93■■□□□ 1.9
TNFRSF25-208ENST00000453341 SPTBN5Q9NRC6 3674 aaKnown RBP26.93■■□□□ 1.9
TNFRSF25-208ENST00000453341 XRCC5P13010 732 aaKnown RBP26.92■■□□□ 1.9
TNFRSF25-208ENST00000453341 IRX3P78415 501 aaPredicted RBP26.92■■□□□ 1.9
TNFRSF25-208ENST00000453341 LHX8Q68G74 356 aa26.92■■□□□ 1.9
TNFRSF25-208ENST00000453341 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.92■■□□□ 1.9
TNFRSF25-208ENST00000453341 ANP32CO43423 234 aa26.91■■□□□ 1.9
TNFRSF25-208ENST00000453341 JAG1P78504 1218 aa26.91■■□□□ 1.9
TNFRSF25-208ENST00000453341 MDM2Q00987 491 aaPredicted RBP26.91■■□□□ 1.9
TNFRSF25-208ENST00000453341 TBC1D9Q6ZT07 1266 aa26.91■■□□□ 1.9
TNFRSF25-208ENST00000453341 SOCS4Q8WXH5 440 aa26.91■■□□□ 1.9
TNFRSF25-208ENST00000453341 USP6NLQ92738 828 aa26.91■■□□□ 1.9
TNFRSF25-208ENST00000453341 WDR18Q9BV38 432 aa26.91■■□□□ 1.9
TNFRSF25-208ENST00000453341 AS3MTQ9HBK9 375 aa26.91■■□□□ 1.9
TNFRSF25-208ENST00000453341 HMG20BQ9P0W2 317 aa26.91■■□□□ 1.9
TNFRSF25-208ENST00000453341 PRUNE2Q8WUY3 3088 aa26.91■■□□□ 1.9
TNFRSF25-208ENST00000453341 MAP4K4O95819 1239 aaPredicted RBP26.9■■□□□ 1.9
TNFRSF25-208ENST00000453341 CCND3P30281 292 aaPredicted RBP26.9■■□□□ 1.9
TNFRSF25-208ENST00000453341 HOXA7P31268 230 aaPredicted RBP26.9■■□□□ 1.9
TNFRSF25-208ENST00000453341 HERVK_113P62684 666 aa26.9■■□□□ 1.9
TNFRSF25-208ENST00000453341 CCL14Q16627 93 aa26.9■■□□□ 1.9
TNFRSF25-208ENST00000453341 GPRC5AQ8NFJ5 357 aa26.9■■□□□ 1.9
TNFRSF25-208ENST00000453341 GUCD1Q96NT3 240 aa26.9■■□□□ 1.9
TNFRSF25-208ENST00000453341 FRMPD3Q5JV73 1810 aa26.89■■□□□ 1.9
TNFRSF25-208ENST00000453341 ZKSCAN1P17029 563 aaPredicted RBP26.89■■□□□ 1.9
TNFRSF25-208ENST00000453341 BACE1P56817 501 aa26.89■■□□□ 1.9
TNFRSF25-208ENST00000453341 TFCP2Q12800 502 aa26.89■■□□□ 1.9
TNFRSF25-208ENST00000453341 MVPQ14764 893 aaKnown RBP26.89■■□□□ 1.9
TNFRSF25-208ENST00000453341 SHROOM1Q2M3G4 852 aaPredicted RBP26.89■■□□□ 1.9
TNFRSF25-208ENST00000453341 Q3C1V9 767 aa26.89■■□□□ 1.9
TNFRSF25-208ENST00000453341 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.89■■□□□ 1.9
TNFRSF25-208ENST00000453341 RBPJLQ9UBG7 517 aa26.89■■□□□ 1.9
TNFRSF25-208ENST00000453341 HERC5Q9UII4 1024 aaKnown RBP26.89■■□□□ 1.9
TNFRSF25-208ENST00000453341 POTEB2H3BUK9 544 aa26.88■■□□□ 1.89
TNFRSF25-208ENST00000453341 LDHCP07864 332 aa26.88■■□□□ 1.89
TNFRSF25-208ENST00000453341 ALDH1L2Q3SY69 923 aa26.88■■□□□ 1.89
TNFRSF25-208ENST00000453341 POTEEQ6S8J3 1075 aa26.88■■□□□ 1.89
TNFRSF25-208ENST00000453341 TEX11Q8IYF3 940 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms