RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 MOGSQ13724 837 aa21.9■■□□□ 1.1
SQSTM1-204ENST00000453046 GADL1Q6ZQY3 521 aa21.9■■□□□ 1.1
SQSTM1-204ENST00000453046 TGFBRAP1Q8WUH2 860 aa21.9■■□□□ 1.1
SQSTM1-204ENST00000453046 PARK7Q99497 189 aaKnown RBP21.9■■□□□ 1.1
SQSTM1-204ENST00000453046 BCL11AQ9H165 835 aa21.9■■□□□ 1.1
SQSTM1-204ENST00000453046 DHX36Q9H2U1 1008 aaKnown RBP21.9■■□□□ 1.1
SQSTM1-204ENST00000453046 A0A0G2JLL6 359 aaPredicted RBP21.89■■□□□ 1.09
SQSTM1-204ENST00000453046 TRIM75PA6NK02 468 aa21.89■■□□□ 1.09
SQSTM1-204ENST00000453046 CYP7A1P22680 504 aa21.89■■□□□ 1.09
SQSTM1-204ENST00000453046 C17orf99Q6UX52 265 aa21.89■■□□□ 1.09
SQSTM1-204ENST00000453046 PRRT2Q7Z6L0 340 aaPredicted RBP21.89■■□□□ 1.09
SQSTM1-204ENST00000453046 ADGRA1Q86SQ6 560 aa21.89■■□□□ 1.09
SQSTM1-204ENST00000453046 MAPKAPK5Q8IW41 473 aa21.89■■□□□ 1.09
SQSTM1-204ENST00000453046 CLASRPQ8N2M8 674 aaKnown RBP21.89■■□□□ 1.09
SQSTM1-204ENST00000453046 RWDD1Q9H446 243 aaPredicted RBP21.89■■□□□ 1.09
SQSTM1-204ENST00000453046 PI4KBQ9UBF8 816 aa21.89■■□□□ 1.09
SQSTM1-204ENST00000453046 COL2A1P02458 1487 aaPredicted RBP21.89■■□□□ 1.09
SQSTM1-204ENST00000453046 KIF1BPQ96EK5 621 aa21.88■■□□□ 1.09
SQSTM1-204ENST00000453046 TRIM34Q9BYJ4 488 aa21.88■■□□□ 1.09
SQSTM1-204ENST00000453046 ARHGAP39Q9C0H5 1083 aa21.88■■□□□ 1.09
SQSTM1-204ENST00000453046 HERC5Q9UII4 1024 aaKnown RBP21.88■■□□□ 1.09
SQSTM1-204ENST00000453046 NDUFB9Q9Y6M9 179 aa21.88■■□□□ 1.09
SQSTM1-204ENST00000453046 GNRH1P01148 92 aa21.87■■□□□ 1.09
SQSTM1-204ENST00000453046 MAP3K12Q12852 859 aa21.87■■□□□ 1.09
SQSTM1-204ENST00000453046 SLC9C1Q4G0N8 1177 aa21.87■■□□□ 1.09
SQSTM1-204ENST00000453046 GPAT2Q6NUI2 795 aa21.87■■□□□ 1.09
SQSTM1-204ENST00000453046 NBPF11Q86T75 865 aa21.87■■□□□ 1.09
SQSTM1-204ENST00000453046 CCDC84Q86UT8 332 aaPredicted RBP21.87■■□□□ 1.09
SQSTM1-204ENST00000453046 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.87■■□□□ 1.09
SQSTM1-204ENST00000453046 PTCH2Q9Y6C5 1203 aa21.87■■□□□ 1.09
SQSTM1-204ENST00000453046 MAST2Q6P0Q8 1798 aa21.87■■□□□ 1.09
SQSTM1-204ENST00000453046 FLT1P17948 1338 aa21.86■■□□□ 1.09
SQSTM1-204ENST00000453046 IFIT2P09913 472 aaKnown RBP21.86■■□□□ 1.09
SQSTM1-204ENST00000453046 CYP2C8P10632 490 aa21.86■■□□□ 1.09
SQSTM1-204ENST00000453046 DYNLL1P63167 89 aaKnown RBP21.86■■□□□ 1.09
SQSTM1-204ENST00000453046 CRACR2BQ8N4Y2 399 aaPredicted RBP21.86■■□□□ 1.09
SQSTM1-204ENST00000453046 MAGEB6Q8N7X4 407 aa21.86■■□□□ 1.09
SQSTM1-204ENST00000453046 HTTP42858 3142 aa21.85■■□□□ 1.09
SQSTM1-204ENST00000453046 FMNL1O95466 1100 aaPredicted RBP21.85■■□□□ 1.09
SQSTM1-204ENST00000453046 CAP2P40123 477 aa21.85■■□□□ 1.09
SQSTM1-204ENST00000453046 PSMC4P43686 418 aa21.85■■□□□ 1.09
SQSTM1-204ENST00000453046 CERS3Q8IU89 383 aa21.85■■□□□ 1.09
SQSTM1-204ENST00000453046 MIGA1Q8NAN2 632 aa21.85■■□□□ 1.09
SQSTM1-204ENST00000453046 ARMC5Q96C12 935 aa21.85■■□□□ 1.09
SQSTM1-204ENST00000453046 ANTXR1Q9H6X2 564 aa21.85■■□□□ 1.09
SQSTM1-204ENST00000453046 DOCK1Q14185 1865 aa21.85■■□□□ 1.09
SQSTM1-204ENST00000453046 RAB11FIP3O75154 756 aa21.84■■□□□ 1.09
SQSTM1-204ENST00000453046 HLA-DOAP06340 250 aa21.84■■□□□ 1.09
SQSTM1-204ENST00000453046 HOXD10P28358 340 aa21.84■■□□□ 1.09
SQSTM1-204ENST00000453046 SIRT2Q8IXJ6 389 aa21.84■■□□□ 1.09
SQSTM1-204ENST00000453046 PALD1Q9ULE6 856 aa21.84■■□□□ 1.09
SQSTM1-204ENST00000453046 SLC45A1Q9Y2W3 748 aa21.84■■□□□ 1.09
SQSTM1-204ENST00000453046 ADGRA2Q96PE1 1338 aa21.83■■□□□ 1.09
SQSTM1-204ENST00000453046 IGHDP01880 384 aa21.83■■□□□ 1.09
SQSTM1-204ENST00000453046 USP5P45974 858 aa21.83■■□□□ 1.09
SQSTM1-204ENST00000453046 PRMT2P55345 433 aa21.83■■□□□ 1.09
SQSTM1-204ENST00000453046 SPP2Q13103 211 aa21.83■■□□□ 1.09
SQSTM1-204ENST00000453046 TTF1Q15361 905 aaPredicted RBP21.83■■□□□ 1.09
SQSTM1-204ENST00000453046 FOXP4Q8IVH2 680 aaPredicted RBP21.83■■□□□ 1.09
SQSTM1-204ENST00000453046 ZNF280CQ8ND82 737 aa21.83■■□□□ 1.09
SQSTM1-204ENST00000453046 SMCR8Q8TEV9 937 aaPredicted RBP21.83■■□□□ 1.09
SQSTM1-204ENST00000453046 TMEM106CQ9BVX2 250 aa21.83■■□□□ 1.09
SQSTM1-204ENST00000453046 TBC1D2Q9BYX2 928 aa21.83■■□□□ 1.09
SQSTM1-204ENST00000453046 AS3MTQ9HBK9 375 aa21.83■■□□□ 1.09
SQSTM1-204ENST00000453046 SAP30BPQ9UHR5 308 aaKnown RBP21.83■■□□□ 1.09
SQSTM1-204ENST00000453046 MYO5AQ9Y4I1 1855 aaKnown RBP21.82■■□□□ 1.08
SQSTM1-204ENST00000453046 USP17L5A8MUK1 530 aa21.82■■□□□ 1.08
SQSTM1-204ENST00000453046 TMED8Q6PL24 325 aaPredicted RBP21.82■■□□□ 1.08
SQSTM1-204ENST00000453046 AGTPBP1Q9UPW5 1226 aa21.82■■□□□ 1.08
SQSTM1-204ENST00000453046 TNRC18O15417 2968 aaPredicted RBP21.82■■□□□ 1.08
SQSTM1-204ENST00000453046 POTEFA5A3E0 1075 aa21.81■■□□□ 1.08
SQSTM1-204ENST00000453046 RRP1BQ14684 758 aaKnown RBP21.81■■□□□ 1.08
SQSTM1-204ENST00000453046 SLC4A8Q2Y0W8 1093 aa21.81■■□□□ 1.08
SQSTM1-204ENST00000453046 ZNF333Q96JL9 665 aa21.81■■□□□ 1.08
SQSTM1-204ENST00000453046 TRIM47Q96LD4 638 aa21.81■■□□□ 1.08
SQSTM1-204ENST00000453046 DNAJC2Q99543 621 aaKnown RBP21.81■■□□□ 1.08
SQSTM1-204ENST00000453046 PNMA3Q9UL41 463 aa21.81■■□□□ 1.08
SQSTM1-204ENST00000453046 CENPFP49454 3210 aa21.81■■□□□ 1.08
SQSTM1-204ENST00000453046 MYCP01106 439 aaPredicted RBP21.8■■□□□ 1.08
SQSTM1-204ENST00000453046 ASNSP08243 561 aa21.8■■□□□ 1.08
SQSTM1-204ENST00000453046 BCRP11274 1271 aa21.8■■□□□ 1.08
SQSTM1-204ENST00000453046 OSBPP22059 807 aa21.8■■□□□ 1.08
SQSTM1-204ENST00000453046 FCGRTP55899 365 aa21.8■■□□□ 1.08
SQSTM1-204ENST00000453046 PROCA1Q8NCQ7 364 aaPredicted RBP21.8■■□□□ 1.08
SQSTM1-204ENST00000453046 RAET1EQ8TD07 263 aa21.8■■□□□ 1.08
SQSTM1-204ENST00000453046 SH3TC2Q8TF17 1288 aa21.8■■□□□ 1.08
SQSTM1-204ENST00000453046 SRRDQ9UH36 339 aa21.8■■□□□ 1.08
SQSTM1-204ENST00000453046 GOLIM4O00461 696 aa21.79■■□□□ 1.08
SQSTM1-204ENST00000453046 CTGFP29279 349 aa21.79■■□□□ 1.08
SQSTM1-204ENST00000453046 HMGCS2P54868 508 aa21.79■■□□□ 1.08
SQSTM1-204ENST00000453046 PABPC4Q13310 644 aaKnown RBP eCLIP21.79■■□□□ 1.08
SQSTM1-204ENST00000453046 TREML2Q5T2D2 321 aa21.79■■□□□ 1.08
SQSTM1-204ENST00000453046 SLC9C2Q5TAH2 1124 aa21.79■■□□□ 1.08
SQSTM1-204ENST00000453046 SMC5Q8IY18 1101 aa21.79■■□□□ 1.08
SQSTM1-204ENST00000453046 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.79■■□□□ 1.08
SQSTM1-204ENST00000453046 GCC1Q96CN9 775 aa21.79■■□□□ 1.08
SQSTM1-204ENST00000453046 PDE4DIPQ5VU43 2346 aa21.79■■□□□ 1.08
SQSTM1-204ENST00000453046 ZSWIM8A7E2V4 1837 aa21.78■■□□□ 1.08
SQSTM1-204ENST00000453046 GDF11O95390 407 aa21.78■■□□□ 1.08
SQSTM1-204ENST00000453046 METTL16Q86W50 562 aaKnown RBP21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms