RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 C17orf99Q6UX52 265 aa17.7■□□□□ 0.42
USP39-206ENST00000448971 SH3TC2Q8TF17 1288 aa17.7■□□□□ 0.42
USP39-206ENST00000448971 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.7■□□□□ 0.42
USP39-206ENST00000448971 FAM151AQ8WW52 585 aa17.7■□□□□ 0.42
USP39-206ENST00000448971 HOOK2Q96ED9 719 aa17.7■□□□□ 0.42
USP39-206ENST00000448971 FAM163AQ96GL9 167 aaPredicted RBP17.7■□□□□ 0.42
USP39-206ENST00000448971 GPATCH3Q96I76 525 aa17.7■□□□□ 0.42
USP39-206ENST00000448971 ANTXR1Q9H6X2 564 aa17.7■□□□□ 0.42
USP39-206ENST00000448971 COLQQ9Y215 455 aaPredicted RBP17.7■□□□□ 0.42
USP39-206ENST00000448971 GPR75-ASB3A0A0A6YYF3 556 aa17.69■□□□□ 0.42
USP39-206ENST00000448971 GOLIM4O00461 696 aa17.69■□□□□ 0.42
USP39-206ENST00000448971 WDHD1O75717 1129 aaPredicted RBP17.69■□□□□ 0.42
USP39-206ENST00000448971 CTGFP29279 349 aa17.69■□□□□ 0.42
USP39-206ENST00000448971 RGS3P49796 1198 aa17.69■□□□□ 0.42
USP39-206ENST00000448971 IRX6P78412 446 aaPredicted RBP17.69■□□□□ 0.42
USP39-206ENST00000448971 PPATQ06203 517 aa17.69■□□□□ 0.42
USP39-206ENST00000448971 MAP3K12Q12852 859 aa17.69■□□□□ 0.42
USP39-206ENST00000448971 MIGA2Q7L4E1 593 aa17.69■□□□□ 0.42
USP39-206ENST00000448971 BOLA2Q9H3K6 86 aa17.69■□□□□ 0.42
USP39-206ENST00000448971 IGSF3O75054 1194 aa17.68■□□□□ 0.42
USP39-206ENST00000448971 BAG3O95817 575 aa17.68■□□□□ 0.42
USP39-206ENST00000448971 MYCP01106 439 aaPredicted RBP17.68■□□□□ 0.42
USP39-206ENST00000448971 INPP5BP32019 993 aa17.68■□□□□ 0.42
USP39-206ENST00000448971 HDAC1Q13547 482 aaPredicted RBP17.68■□□□□ 0.42
USP39-206ENST00000448971 KIF22Q14807 665 aa17.68■□□□□ 0.42
USP39-206ENST00000448971 ZSCAN29Q8IWY8 852 aaPredicted RBP17.68■□□□□ 0.42
USP39-206ENST00000448971 MAGEB6Q8N7X4 407 aa17.68■□□□□ 0.42
USP39-206ENST00000448971 IDI2Q9BXS1 227 aa17.68■□□□□ 0.42
USP39-206ENST00000448971 AATFQ9NY61 560 aaKnown RBP eCLIP17.68■□□□□ 0.42
USP39-206ENST00000448971 FAM198AQ9UFP1 575 aa17.68■□□□□ 0.42
USP39-206ENST00000448971 ZNF112Q9UJU3 913 aa17.68■□□□□ 0.42
USP39-206ENST00000448971 ENTPD3O75355 529 aa17.67■□□□□ 0.42
USP39-206ENST00000448971 ATP5JP18859 108 aa17.67■□□□□ 0.42
USP39-206ENST00000448971 CYP7A1P22680 504 aa17.67■□□□□ 0.42
USP39-206ENST00000448971 PRMT2P55345 433 aa17.67■□□□□ 0.42
USP39-206ENST00000448971 RHBDL3P58872 404 aa17.67■□□□□ 0.42
USP39-206ENST00000448971 MOGSQ13724 837 aa17.67■□□□□ 0.42
USP39-206ENST00000448971 DCAF15Q66K64 600 aa17.67■□□□□ 0.42
USP39-206ENST00000448971 ADGRA1Q86SQ6 560 aa17.67■□□□□ 0.42
USP39-206ENST00000448971 TEX11Q8IYF3 940 aa17.67■□□□□ 0.42
USP39-206ENST00000448971 ZNF341Q9BYN7 854 aa17.67■□□□□ 0.42
USP39-206ENST00000448971 ECHDC1Q9NTX5 307 aa17.67■□□□□ 0.42
USP39-206ENST00000448971 PAG1Q9NWQ8 432 aa17.67■□□□□ 0.42
USP39-206ENST00000448971 KCNH4Q9UQ05 1017 aa17.67■□□□□ 0.42
USP39-206ENST00000448971 MYO5AQ9Y4I1 1855 aaKnown RBP17.67■□□□□ 0.42
USP39-206ENST00000448971 PLCG2P16885 1265 aa17.66■□□□□ 0.42
USP39-206ENST00000448971 ANKRD23Q86SG2 305 aa17.66■□□□□ 0.42
USP39-206ENST00000448971 TRIM47Q96LD4 638 aa17.66■□□□□ 0.42
USP39-206ENST00000448971 DDX4Q9NQI0 724 aaKnown RBP17.66■□□□□ 0.42
USP39-206ENST00000448971 CPA4Q9UI42 421 aa17.66■□□□□ 0.42
USP39-206ENST00000448971 ADGRA2Q96PE1 1338 aa17.66■□□□□ 0.42
USP39-206ENST00000448971 H0YGN5 161 aa17.65■□□□□ 0.42
USP39-206ENST00000448971 MAP4K4O95819 1239 aaPredicted RBP17.65■□□□□ 0.42
USP39-206ENST00000448971 MTFR1Q15390 333 aa17.65■□□□□ 0.42
USP39-206ENST00000448971 TSHZ3Q63HK5 1081 aa17.65■□□□□ 0.42
USP39-206ENST00000448971 MIGA1Q8NAN2 632 aa17.65■□□□□ 0.42
USP39-206ENST00000448971 SH3RF3Q8TEJ3 882 aaPredicted RBP17.65■□□□□ 0.42
USP39-206ENST00000448971 EDC3Q96F86 508 aaKnown RBP17.65■□□□□ 0.42
USP39-206ENST00000448971 HAUS7Q99871 368 aa17.65■□□□□ 0.42
USP39-206ENST00000448971 SRRDQ9UH36 339 aa17.65■□□□□ 0.42
USP39-206ENST00000448971 PDHXO00330 501 aa17.64■□□□□ 0.41
USP39-206ENST00000448971 PSMC4P43686 418 aa17.64■□□□□ 0.41
USP39-206ENST00000448971 ANKRD45Q5TZF3 282 aa17.64■□□□□ 0.41
USP39-206ENST00000448971 ZFPM1Q8IX07 1006 aa17.64■□□□□ 0.41
USP39-206ENST00000448971 SHISA4Q96DD7 197 aa17.64■□□□□ 0.41
USP39-206ENST00000448971 RWDD1Q9H446 243 aaPredicted RBP17.64■□□□□ 0.41
USP39-206ENST00000448971 AK9Q5TCS8 1911 aa17.64■□□□□ 0.41
USP39-206ENST00000448971 ECM2O94769 699 aaPredicted RBP17.63■□□□□ 0.41
USP39-206ENST00000448971 PDE6AP16499 860 aa17.63■□□□□ 0.41
USP39-206ENST00000448971 OSBPP22059 807 aa17.63■□□□□ 0.41
USP39-206ENST00000448971 SLC9C2Q5TAH2 1124 aa17.63■□□□□ 0.41
USP39-206ENST00000448971 TMED8Q6PL24 325 aaPredicted RBP17.63■□□□□ 0.41
USP39-206ENST00000448971 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.63■□□□□ 0.411e-6■■■□□ 14.8
USP39-206ENST00000448971 OSBPL5Q9H0X9 879 aaPredicted RBP17.63■□□□□ 0.41
USP39-206ENST00000448971 COL2A1P02458 1487 aaPredicted RBP17.63■□□□□ 0.41
USP39-206ENST00000448971 DDTLA6NHG4 134 aaPredicted RBP17.62■□□□□ 0.41
USP39-206ENST00000448971 DYNLL1P63167 89 aaKnown RBP17.62■□□□□ 0.41
USP39-206ENST00000448971 NOL9Q5SY16 702 aaKnown RBP17.62■□□□□ 0.41
USP39-206ENST00000448971 GPAT2Q6NUI2 795 aa17.62■□□□□ 0.41
USP39-206ENST00000448971 UBE2Q1Q7Z7E8 422 aa17.62■□□□□ 0.41
USP39-206ENST00000448971 CERS3Q8IU89 383 aa17.62■□□□□ 0.41
USP39-206ENST00000448971 TTC41PQ6P2S7 1318 aa17.62■□□□□ 0.41
USP39-206ENST00000448971 ERC2O15083 957 aa17.61■□□□□ 0.41
USP39-206ENST00000448971 MX1P20591 662 aa17.61■□□□□ 0.41
USP39-206ENST00000448971 HOXD10P28358 340 aa17.61■□□□□ 0.41
USP39-206ENST00000448971 GRK4P32298 578 aa17.61■□□□□ 0.41
USP39-206ENST00000448971 PPP4CP60510 307 aa17.61■□□□□ 0.41
USP39-206ENST00000448971 MAPKAPK5Q8IW41 473 aa17.61■□□□□ 0.41
USP39-206ENST00000448971 OTUD7AQ8TE49 926 aaPredicted RBP17.61■□□□□ 0.41
USP39-206ENST00000448971 TGFBRAP1Q8WUH2 860 aa17.61■□□□□ 0.41
USP39-206ENST00000448971 FLT1P17948 1338 aa17.61■□□□□ 0.41
USP39-206ENST00000448971 ZNF532Q9HCE3 1301 aa17.61■□□□□ 0.41
USP39-206ENST00000448971 ATRNL1Q5VV63 1379 aa17.61■□□□□ 0.41
USP39-206ENST00000448971 PHF20L1A8MW92 1017 aa17.6■□□□□ 0.41
USP39-206ENST00000448971 CXCL11O14625 94 aa17.6■□□□□ 0.41
USP39-206ENST00000448971 FMNL1O95466 1100 aaPredicted RBP17.6■□□□□ 0.41
USP39-206ENST00000448971 BCRP11274 1271 aa17.6■□□□□ 0.41
USP39-206ENST00000448971 USP5P45974 858 aa17.6■□□□□ 0.41
USP39-206ENST00000448971 SH3BP5LQ7L8J4 393 aa17.6■□□□□ 0.41
USP39-206ENST00000448971 FOCADQ5VW36 1801 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms