RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 SLC4A4Q9Y6R1 1079 aa16.85■□□□□ 0.29
GTF3C3-206ENST00000448539 MKRN3Q13064 507 aaKnown RBP16.84■□□□□ 0.29
GTF3C3-206ENST00000448539 SLC4A8Q2Y0W8 1093 aa16.84■□□□□ 0.29
GTF3C3-206ENST00000448539 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.84■□□□□ 0.29
GTF3C3-206ENST00000448539 TICAM2Q86XR7 235 aa16.84■□□□□ 0.29
GTF3C3-206ENST00000448539 FOXP4Q8IVH2 680 aaPredicted RBP16.84■□□□□ 0.29
GTF3C3-206ENST00000448539 ZKSCAN4Q969J2 545 aaPredicted RBP16.84■□□□□ 0.29
GTF3C3-206ENST00000448539 MCM9Q9NXL9 1143 aa16.84■□□□□ 0.29
GTF3C3-206ENST00000448539 ZNF112Q9UJU3 913 aa16.84■□□□□ 0.29
GTF3C3-206ENST00000448539 GPAA1O43292 621 aa16.83■□□□□ 0.28
GTF3C3-206ENST00000448539 PRKAB2O43741 272 aa16.83■□□□□ 0.28
GTF3C3-206ENST00000448539 GNAT2P19087 354 aa16.83■□□□□ 0.28
GTF3C3-206ENST00000448539 KIF23Q02241 960 aaPredicted RBP16.83■□□□□ 0.28
GTF3C3-206ENST00000448539 ZMYM1Q5SVZ6 1142 aa16.83■□□□□ 0.28
GTF3C3-206ENST00000448539 SPRYD7Q5W111 196 aa16.83■□□□□ 0.28
GTF3C3-206ENST00000448539 REM2Q8IYK8 340 aaPredicted RBP16.83■□□□□ 0.28
GTF3C3-206ENST00000448539 WNK4Q96J92 1243 aa16.83■□□□□ 0.28
GTF3C3-206ENST00000448539 STRBPQ96SI9 672 aaKnown RBP16.83■□□□□ 0.28
GTF3C3-206ENST00000448539 BEGAINQ9BUH8 593 aa16.83■□□□□ 0.28
GTF3C3-206ENST00000448539 DCP1AQ9NPI6 582 aaPredicted RBP16.83■□□□□ 0.28
GTF3C3-206ENST00000448539 MYH7P12883 1935 aa16.82■□□□□ 0.28
GTF3C3-206ENST00000448539 M0R2C6 588 aa16.82■□□□□ 0.28
GTF3C3-206ENST00000448539 ZBTB48P10074 688 aaPredicted RBP16.82■□□□□ 0.28
GTF3C3-206ENST00000448539 INPP5BP32019 993 aa16.82■□□□□ 0.28
GTF3C3-206ENST00000448539 MAP3K10Q02779 954 aa16.82■□□□□ 0.28
GTF3C3-206ENST00000448539 TTC22Q5TAA0 569 aa16.82■□□□□ 0.28
GTF3C3-206ENST00000448539 OPTNQ96CV9 577 aa16.82■□□□□ 0.28
GTF3C3-206ENST00000448539 PICK1Q9NRD5 415 aa16.82■□□□□ 0.28
GTF3C3-206ENST00000448539 PPP4R2Q9NY27 417 aa16.82■□□□□ 0.28
GTF3C3-206ENST00000448539 FAM196BA6NMK8 535 aa16.81■□□□□ 0.28
GTF3C3-206ENST00000448539 PHF20L1A8MW92 1017 aa16.81■□□□□ 0.28
GTF3C3-206ENST00000448539 HIP1O00291 1037 aa16.81■□□□□ 0.28
GTF3C3-206ENST00000448539 CTNND1O60716 968 aaKnown RBP16.81■□□□□ 0.28
GTF3C3-206ENST00000448539 APPP05067 770 aa16.81■□□□□ 0.28
GTF3C3-206ENST00000448539 NOL9Q5SY16 702 aaKnown RBP16.81■□□□□ 0.28
GTF3C3-206ENST00000448539 ERO1BQ86YB8 467 aa16.81■□□□□ 0.28
GTF3C3-206ENST00000448539 SCYL3Q8IZE3 742 aa16.81■□□□□ 0.28
GTF3C3-206ENST00000448539 OTUD5Q96G74 571 aa16.81■□□□□ 0.28
GTF3C3-206ENST00000448539 HELLSQ9NRZ9 838 aa16.81■□□□□ 0.28
GTF3C3-206ENST00000448539 DIAPH3Q9NSV4 1193 aa16.81■□□□□ 0.28
GTF3C3-206ENST00000448539 SERPINB13Q9UIV8 391 aa16.81■□□□□ 0.28
GTF3C3-206ENST00000448539 TSKSQ9UJT2 592 aa16.81■□□□□ 0.28
GTF3C3-206ENST00000448539 SNCAIPQ9Y6H5 919 aa16.81■□□□□ 0.28
GTF3C3-206ENST00000448539 SPDYE5A6NIY4 337 aa16.8■□□□□ 0.28
GTF3C3-206ENST00000448539 SLURP2P0DP57 97 aa16.8■□□□□ 0.28
GTF3C3-206ENST00000448539 SDSP20132 328 aa16.8■□□□□ 0.28
GTF3C3-206ENST00000448539 SREBF2Q12772 1141 aa16.8■□□□□ 0.28
GTF3C3-206ENST00000448539 MCMDC2Q4G0Z9 681 aa16.8■□□□□ 0.28
GTF3C3-206ENST00000448539 ZIC5Q96T25 663 aa16.8■□□□□ 0.28
GTF3C3-206ENST00000448539 SEC62Q99442 399 aaKnown RBP16.8■□□□□ 0.28
GTF3C3-206ENST00000448539 NACAP1Q9BZK3 213 aa16.8■□□□□ 0.28
GTF3C3-206ENST00000448539 EHD4Q9H223 541 aa16.8■□□□□ 0.28
GTF3C3-206ENST00000448539 MANSC4A6NHS7 340 aaPredicted RBP16.79■□□□□ 0.28
GTF3C3-206ENST00000448539 PATL2C9JE40 543 aaKnown RBP16.79■□□□□ 0.28
GTF3C3-206ENST00000448539 PLCD1P51178 756 aa16.79■□□□□ 0.28
GTF3C3-206ENST00000448539 PPATQ06203 517 aa16.79■□□□□ 0.28
GTF3C3-206ENST00000448539 GIMAP6Q6P9H5 292 aa16.79■□□□□ 0.28
GTF3C3-206ENST00000448539 FOCADQ5VW36 1801 aa16.78■□□□□ 0.28
GTF3C3-206ENST00000448539 USP17L12C9JPN9 530 aa16.78■□□□□ 0.28
GTF3C3-206ENST00000448539 USP17L21D6R901 530 aa16.78■□□□□ 0.28
GTF3C3-206ENST00000448539 GSPT1P15170 499 aaKnown RBP16.78■□□□□ 0.28
GTF3C3-206ENST00000448539 TDO2P48775 406 aa16.78■□□□□ 0.28
GTF3C3-206ENST00000448539 MFAP1P55081 439 aaKnown RBP16.78■□□□□ 0.28
GTF3C3-206ENST00000448539 NMIQ13287 307 aaPredicted RBP16.78■□□□□ 0.28
GTF3C3-206ENST00000448539 METTL16Q86W50 562 aaKnown RBP16.78■□□□□ 0.28
GTF3C3-206ENST00000448539 CNKSR2Q8WXI2 1034 aa16.78■□□□□ 0.28
GTF3C3-206ENST00000448539 FAM227BQ96M60 508 aa16.78■□□□□ 0.28
GTF3C3-206ENST00000448539 ARPP21Q9UBL0 812 aaPredicted RBP16.78■□□□□ 0.28
GTF3C3-206ENST00000448539 CDK5RAP2Q96SN8 1893 aa16.78■□□□□ 0.28
GTF3C3-206ENST00000448539 GSG1L2A8MUP6 293 aa16.77■□□□□ 0.28
GTF3C3-206ENST00000448539 CYP2D6P10635 497 aa16.77■□□□□ 0.28
GTF3C3-206ENST00000448539 GJA5P36382 358 aa16.77■□□□□ 0.28
GTF3C3-206ENST00000448539 CAP2P40123 477 aa16.77■□□□□ 0.28
GTF3C3-206ENST00000448539 GTF2A2P52657 109 aa16.77■□□□□ 0.28
GTF3C3-206ENST00000448539 INHBEP58166 350 aa16.77■□□□□ 0.28
GTF3C3-206ENST00000448539 PPIL2Q13356 520 aa16.77■□□□□ 0.28
GTF3C3-206ENST00000448539 CCDC129Q6ZRS4 1044 aa16.77■□□□□ 0.28
GTF3C3-206ENST00000448539 DNAJC18Q9H819 358 aa16.77■□□□□ 0.28
GTF3C3-206ENST00000448539 A0A0D9SFI3 127 aa16.76■□□□□ 0.27
GTF3C3-206ENST00000448539 PTPRAP18433 802 aa16.76■□□□□ 0.27
GTF3C3-206ENST00000448539 OTUD7BQ6GQQ9 843 aa16.76■□□□□ 0.27
GTF3C3-206ENST00000448539 CTR9Q6PD62 1173 aa16.76■□□□□ 0.27
GTF3C3-206ENST00000448539 CWC27Q6UX04 472 aaKnown RBP16.76■□□□□ 0.27
GTF3C3-206ENST00000448539 NAPBQ9H115 298 aa16.76■□□□□ 0.27
GTF3C3-206ENST00000448539 SWAP70Q9UH65 585 aa16.76■□□□□ 0.27
GTF3C3-206ENST00000448539 TAOK2Q9UL54 1235 aa16.76■□□□□ 0.27
GTF3C3-206ENST00000448539 ZHX2Q9Y6X8 837 aa16.76■□□□□ 0.27
GTF3C3-206ENST00000448539 OTOFQ9HC10 1997 aa16.76■□□□□ 0.27
GTF3C3-206ENST00000448539 MYH1P12882 1939 aa16.76■□□□□ 0.27
GTF3C3-206ENST00000448539 NAV1Q8NEY1 1877 aa16.76■□□□□ 0.27
GTF3C3-206ENST00000448539 MINDY4BA8MYZ0 360 aa16.75■□□□□ 0.27
GTF3C3-206ENST00000448539 IRF6O14896 467 aa16.75■□□□□ 0.27
GTF3C3-206ENST00000448539 CA12O43570 354 aa16.75■□□□□ 0.27
GTF3C3-206ENST00000448539 ASNSP08243 561 aa16.75■□□□□ 0.27
GTF3C3-206ENST00000448539 CETPP11597 493 aa16.75■□□□□ 0.27
GTF3C3-206ENST00000448539 TM4SF4P48230 202 aa16.75■□□□□ 0.27
GTF3C3-206ENST00000448539 SNAPC2Q13487 334 aa16.75■□□□□ 0.27
GTF3C3-206ENST00000448539 CERKLQ49MI3 558 aaPredicted RBP16.75■□□□□ 0.27
GTF3C3-206ENST00000448539 SBK1Q52WX2 424 aa16.75■□□□□ 0.27
GTF3C3-206ENST00000448539 C12orf60Q5U649 245 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms