RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 PLEKHF1Q96S99 279 aa12.08□□□□□ -0.47
LINC00342-202ENST00000448494 TSPYL2Q9H2G4 693 aaPredicted RBP12.08□□□□□ -0.47
LINC00342-202ENST00000448494 UNC45AQ9H3U1 944 aa12.08□□□□□ -0.47
LINC00342-202ENST00000448494 ZWILCHQ9H900 591 aa12.08□□□□□ -0.47
LINC00342-202ENST00000448494 SENP2Q9HC62 589 aa12.08□□□□□ -0.47
LINC00342-202ENST00000448494 NOP53Q9NZM5 478 aaKnown RBP12.08□□□□□ -0.47
LINC00342-202ENST00000448494 PHF24Q9UPV7 400 aa12.08□□□□□ -0.47
LINC00342-202ENST00000448494 ZNF510Q9Y2H8 683 aa12.08□□□□□ -0.47
LINC00342-202ENST00000448494 NSD2O96028 1365 aa12.08□□□□□ -0.48
LINC00342-202ENST00000448494 NPHP4O75161 1426 aaPredicted RBP12.08□□□□□ -0.48
LINC00342-202ENST00000448494 M0R2C6 588 aa12.08□□□□□ -0.48
LINC00342-202ENST00000448494 E2F6O75461 281 aa12.08□□□□□ -0.48
LINC00342-202ENST00000448494 NPTXRO95502 500 aa12.08□□□□□ -0.48
LINC00342-202ENST00000448494 TOP1P11387 765 aaKnown RBP12.08□□□□□ -0.48
LINC00342-202ENST00000448494 MPP3Q13368 585 aa12.08□□□□□ -0.48
LINC00342-202ENST00000448494 EXOC8Q8IYI6 725 aa12.08□□□□□ -0.48
LINC00342-202ENST00000448494 PHACTR1Q9C0D0 580 aa12.08□□□□□ -0.48
LINC00342-202ENST00000448494 ABCA9Q8IUA7 1624 aa12.08□□□□□ -0.48
LINC00342-202ENST00000448494 STXBP3O00186 592 aa12.07□□□□□ -0.48
LINC00342-202ENST00000448494 CYP27B1O15528 508 aa12.07□□□□□ -0.48
LINC00342-202ENST00000448494 CCDC175P0C221 793 aa12.07□□□□□ -0.48
LINC00342-202ENST00000448494 RPL13P26373 211 aaKnown RBP12.07□□□□□ -0.48
LINC00342-202ENST00000448494 MTHFSP49914 203 aa12.07□□□□□ -0.48
LINC00342-202ENST00000448494 PABPC4Q13310 644 aaKnown RBP eCLIP12.07□□□□□ -0.48
LINC00342-202ENST00000448494 ANKRD20A8PQ5CZ79 823 aa12.07□□□□□ -0.48
LINC00342-202ENST00000448494 NUGGCQ68CJ6 796 aa12.07□□□□□ -0.48
LINC00342-202ENST00000448494 TOGARAM2Q6ZUX3 1019 aa12.07□□□□□ -0.48
LINC00342-202ENST00000448494 MOV10L1Q9BXT6 1211 aaKnown RBP12.07□□□□□ -0.48
LINC00342-202ENST00000448494 CWC25Q9NXE8 425 aaPredicted RBP12.07□□□□□ -0.48
LINC00342-202ENST00000448494 SLC5A4Q9NY91 659 aa12.07□□□□□ -0.48
LINC00342-202ENST00000448494 UTP6Q9NYH9 597 aaKnown RBP12.07□□□□□ -0.48
LINC00342-202ENST00000448494 CEP126Q9P2H0 1117 aa12.07□□□□□ -0.48
LINC00342-202ENST00000448494 WDR35Q9P2L0 1181 aa12.07□□□□□ -0.48
LINC00342-202ENST00000448494 SH3TC1Q8TE82 1336 aa12.07□□□□□ -0.48
LINC00342-202ENST00000448494 SALL3Q9BXA9 1300 aa12.07□□□□□ -0.48
LINC00342-202ENST00000448494 USP32Q8NFA0 1604 aa12.07□□□□□ -0.48
LINC00342-202ENST00000448494 EIF4BP23588 611 aaKnown RBP12.07□□□□□ -0.48
LINC00342-202ENST00000448494 LSP1P33241 339 aa12.07□□□□□ -0.48
LINC00342-202ENST00000448494 FAM160A1Q05DH4 1040 aa12.07□□□□□ -0.48
LINC00342-202ENST00000448494 AKNAD1Q5T1N1 836 aa12.07□□□□□ -0.48
LINC00342-202ENST00000448494 ARHGEF25Q86VW2 580 aa12.07□□□□□ -0.48
LINC00342-202ENST00000448494 TMOD4Q9NZQ9 345 aa12.07□□□□□ -0.48
LINC00342-202ENST00000448494 SPATA7Q9P0W8 599 aa12.07□□□□□ -0.48
LINC00342-202ENST00000448494 ANKIB1Q9P2G1 1089 aa12.07□□□□□ -0.48
LINC00342-202ENST00000448494 CFDP1Q9UEE9 299 aaPredicted RBP12.07□□□□□ -0.48
LINC00342-202ENST00000448494 WDR37Q9Y2I8 494 aa12.07□□□□□ -0.48
LINC00342-202ENST00000448494 FRMPD1Q5SYB0 1578 aa12.06□□□□□ -0.48
LINC00342-202ENST00000448494 GPR75-ASB3A0A0A6YYF3 556 aa12.06□□□□□ -0.48
LINC00342-202ENST00000448494 VAMP4O75379 141 aa12.06□□□□□ -0.48
LINC00342-202ENST00000448494 FAM107AO95990 144 aa12.06□□□□□ -0.48
LINC00342-202ENST00000448494 PENKP01210 267 aaPredicted RBP12.06□□□□□ -0.48
LINC00342-202ENST00000448494 GHRP10912 638 aa12.06□□□□□ -0.48
LINC00342-202ENST00000448494 ALDH3A1P30838 453 aa12.06□□□□□ -0.48
LINC00342-202ENST00000448494 ELF3P78545 371 aaPredicted RBP12.06□□□□□ -0.48
LINC00342-202ENST00000448494 ST3GAL1Q11201 340 aa12.06□□□□□ -0.48
LINC00342-202ENST00000448494 PDCLQ13371 301 aa12.06□□□□□ -0.48
LINC00342-202ENST00000448494 NCAPHQ15003 741 aa12.06□□□□□ -0.48
LINC00342-202ENST00000448494 Q4G0T1 1027 aa12.06□□□□□ -0.48
LINC00342-202ENST00000448494 SPECC1Q5M775 1068 aa12.06□□□□□ -0.48
LINC00342-202ENST00000448494 PPP1R15BQ5SWA1 713 aa12.06□□□□□ -0.48
LINC00342-202ENST00000448494 AFAP1Q8N556 730 aa12.06□□□□□ -0.48
LINC00342-202ENST00000448494 GBP7Q8N8V2 638 aaPredicted RBP12.06□□□□□ -0.48
LINC00342-202ENST00000448494 ASB3Q9Y575 518 aa12.06□□□□□ -0.48
LINC00342-202ENST00000448494 GMEB1Q9Y692 573 aa12.06□□□□□ -0.48
LINC00342-202ENST00000448494 KIAA0232Q92628 1395 aa12.06□□□□□ -0.48
LINC00342-202ENST00000448494 CDK12Q9NYV4 1490 aaPredicted RBP12.06□□□□□ -0.48
LINC00342-202ENST00000448494 ABCC3O15438 1527 aa12.06□□□□□ -0.48
LINC00342-202ENST00000448494 ABCA6Q8N139 1617 aa12.06□□□□□ -0.48
LINC00342-202ENST00000448494 VIMP08670 466 aaKnown RBP12.06□□□□□ -0.48
LINC00342-202ENST00000448494 UBASH3AP57075 661 aa12.06□□□□□ -0.48
LINC00342-202ENST00000448494 KDM7AQ6ZMT4 941 aa12.06□□□□□ -0.48
LINC00342-202ENST00000448494 ARMC9Q7Z3E5 817 aa12.06□□□□□ -0.48
LINC00342-202ENST00000448494 NLRP14Q86W24 1093 aa12.06□□□□□ -0.48
LINC00342-202ENST00000448494 NOA1Q8NC60 698 aaKnown RBP12.06□□□□□ -0.48
LINC00342-202ENST00000448494 ENGASEQ8NFI3 743 aa12.06□□□□□ -0.48
LINC00342-202ENST00000448494 TEKT4Q8WW24 435 aa12.06□□□□□ -0.48
LINC00342-202ENST00000448494 L3MBTL3Q96JM7 780 aaPredicted RBP12.06□□□□□ -0.48
LINC00342-202ENST00000448494 SELENOOQ9BVL4 669 aa12.06□□□□□ -0.48
LINC00342-202ENST00000448494 TM6SF1Q9BZW5 370 aa12.06□□□□□ -0.48
LINC00342-202ENST00000448494 LRRD1A4D1F6 860 aa12.05□□□□□ -0.48
LINC00342-202ENST00000448494 LRRC10BA6NIK2 292 aa12.05□□□□□ -0.48
LINC00342-202ENST00000448494 DESP17661 470 aa12.05□□□□□ -0.48
LINC00342-202ENST00000448494 SCTRP47872 440 aa12.05□□□□□ -0.48
LINC00342-202ENST00000448494 TBX2Q13207 712 aaPredicted RBP12.05□□□□□ -0.48
LINC00342-202ENST00000448494 KARSQ15046 597 aaKnown RBP12.05□□□□□ -0.48
LINC00342-202ENST00000448494 PTGISQ16647 500 aa12.05□□□□□ -0.48
LINC00342-202ENST00000448494 CCDC80Q76M96 950 aa12.05□□□□□ -0.48
LINC00342-202ENST00000448494 MYCBPAPQ8TBZ2 947 aa12.05□□□□□ -0.48
LINC00342-202ENST00000448494 HDAC7Q8WUI4 952 aa12.05□□□□□ -0.48
LINC00342-202ENST00000448494 CCT8L2Q96SF2 557 aa12.05□□□□□ -0.48
LINC00342-202ENST00000448494 RIMS1Q86UR5 1692 aaKnown RBP12.05□□□□□ -0.48
LINC00342-202ENST00000448494 A0A1B0GVL5 298 aa12.05□□□□□ -0.48
LINC00342-202ENST00000448494 GNAQP50148 359 aa12.05□□□□□ -0.48
LINC00342-202ENST00000448494 ERVK-7P63135 1459 aa12.05□□□□□ -0.48
LINC00342-202ENST00000448494 MSL1Q68DK7 614 aa12.05□□□□□ -0.48
LINC00342-202ENST00000448494 Q6ZUG5 572 aa12.05□□□□□ -0.48
LINC00342-202ENST00000448494 LCA5Q86VQ0 697 aa12.05□□□□□ -0.48
LINC00342-202ENST00000448494 LZICQ8WZA0 190 aa12.05□□□□□ -0.48
LINC00342-202ENST00000448494 TMEM98Q9Y2Y6 226 aa12.05□□□□□ -0.48
LINC00342-202ENST00000448494 CHD2O14647 1828 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms