RNA–Protein interactions for RNA: ENST00000448301.6

CTSS-202, Transcript of cathepsin S, humanhuman

TSL 2 BASIC

Gene CTSS, Length 1,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-202ENST00000448301 MAP3K10Q02779 954 aa16.76■□□□□ 0.27
CTSS-202ENST00000448301 C12orf60Q5U649 245 aa16.76■□□□□ 0.27
CTSS-202ENST00000448301 CST9Q5W186 159 aa16.76■□□□□ 0.27
CTSS-202ENST00000448301 CTR9Q6PD62 1173 aa16.76■□□□□ 0.27
CTSS-202ENST00000448301 METTL16Q86W50 562 aaKnown RBP16.76■□□□□ 0.27
CTSS-202ENST00000448301 HERC5Q9UII4 1024 aaKnown RBP16.76■□□□□ 0.27
CTSS-202ENST00000448301 TAOK2Q9UL54 1235 aa16.76■□□□□ 0.27
CTSS-202ENST00000448301 DOCK1Q14185 1865 aa16.76■□□□□ 0.27
CTSS-202ENST00000448301 ROBO3Q96MS0 1386 aa16.75■□□□□ 0.27
CTSS-202ENST00000448301 PPP1R12BO60237 982 aaPredicted RBP16.75■□□□□ 0.27
CTSS-202ENST00000448301 PLCD1P51178 756 aa16.75■□□□□ 0.27
CTSS-202ENST00000448301 SLC4A8Q2Y0W8 1093 aa16.75■□□□□ 0.27
CTSS-202ENST00000448301 FOXP4Q8IVH2 680 aaPredicted RBP16.75■□□□□ 0.27
CTSS-202ENST00000448301 GBA2Q9HCG7 927 aaPredicted RBP16.75■□□□□ 0.27
CTSS-202ENST00000448301 FGAP02671 866 aa16.74■□□□□ 0.27
CTSS-202ENST00000448301 CYP2D6P10635 497 aa16.74■□□□□ 0.27
CTSS-202ENST00000448301 MAP3K11Q16584 847 aa16.74■□□□□ 0.27
CTSS-202ENST00000448301 ZNF341Q9BYN7 854 aa16.74■□□□□ 0.27
CTSS-202ENST00000448301 SERPINB13Q9UIV8 391 aa16.74■□□□□ 0.27
CTSS-202ENST00000448301 APLP1P51693 650 aa16.73■□□□□ 0.27
CTSS-202ENST00000448301 GABPAQ06546 454 aa16.73■□□□□ 0.27
CTSS-202ENST00000448301 KIAA1211Q6ZU35 1233 aa16.73■□□□□ 0.27
CTSS-202ENST00000448301 MIGA2Q7L4E1 593 aa16.73■□□□□ 0.27
CTSS-202ENST00000448301 ARMC9Q7Z3E5 817 aa16.73■□□□□ 0.27
CTSS-202ENST00000448301 CRACR2BQ8N4Y2 399 aaPredicted RBP16.73■□□□□ 0.27
CTSS-202ENST00000448301 C2orf69Q8N8R5 385 aa16.73■□□□□ 0.27
CTSS-202ENST00000448301 LSG1Q9H089 658 aaKnown RBP16.73■□□□□ 0.27
CTSS-202ENST00000448301 DNAJC18Q9H819 358 aa16.73■□□□□ 0.27
CTSS-202ENST00000448301 CYP2D7A0A087X1C5 515 aa16.72■□□□□ 0.27
CTSS-202ENST00000448301 TMEM88BA6NKF7 163 aa16.72■□□□□ 0.27
CTSS-202ENST00000448301 MINDY4BA8MYZ0 360 aa16.72■□□□□ 0.27
CTSS-202ENST00000448301 USP2O75604 605 aaPredicted RBP16.72■□□□□ 0.27
CTSS-202ENST00000448301 IREB2P48200 963 aaKnown RBP16.72■□□□□ 0.27
CTSS-202ENST00000448301 PTH1RQ03431 593 aa16.72■□□□□ 0.27
CTSS-202ENST00000448301 EVX2Q03828 476 aa16.72■□□□□ 0.27
CTSS-202ENST00000448301 PRKG1Q13976 671 aa16.72■□□□□ 0.27
CTSS-202ENST00000448301 TTLL12Q14166 644 aaPredicted RBP16.72■□□□□ 0.27
CTSS-202ENST00000448301 MAP4K1Q92918 833 aa16.72■□□□□ 0.27
CTSS-202ENST00000448301 KLRG1Q96E93 195 aa16.72■□□□□ 0.27
CTSS-202ENST00000448301 TRIM34Q9BYJ4 488 aa16.72■□□□□ 0.27
CTSS-202ENST00000448301 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.72■□□□□ 0.27
CTSS-202ENST00000448301 SWAP70Q9UH65 585 aa16.72■□□□□ 0.27
CTSS-202ENST00000448301 ZNF112Q9UJU3 913 aa16.72■□□□□ 0.27
CTSS-202ENST00000448301 ANGEL1Q9UNK9 670 aaKnown RBP16.72■□□□□ 0.27
CTSS-202ENST00000448301 FZD1Q9UP38 647 aa16.72■□□□□ 0.27
CTSS-202ENST00000448301 UNCXA6NJT0 531 aa16.71■□□□□ 0.27
CTSS-202ENST00000448301 SLURP2P0DP57 97 aa16.71■□□□□ 0.27
CTSS-202ENST00000448301 C1QTNF8P60827 252 aa16.71■□□□□ 0.27
CTSS-202ENST00000448301 PPARAQ07869 468 aa16.71■□□□□ 0.27
CTSS-202ENST00000448301 C16orf86Q6ZW13 317 aa16.71■□□□□ 0.27
CTSS-202ENST00000448301 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.71■□□□□ 0.27
CTSS-202ENST00000448301 ANO2Q9NQ90 1003 aa16.71■□□□□ 0.27
CTSS-202ENST00000448301 CTNNA3Q9UI47 895 aa16.71■□□□□ 0.27
CTSS-202ENST00000448301 ANAPC4Q9UJX5 808 aa16.71■□□□□ 0.27
CTSS-202ENST00000448301 FAM196BA6NMK8 535 aa16.7■□□□□ 0.26
CTSS-202ENST00000448301 PHF20L1A8MW92 1017 aa16.7■□□□□ 0.26
CTSS-202ENST00000448301 MOB2Q70IA6 237 aa16.7■□□□□ 0.26
CTSS-202ENST00000448301 CREBZFQ9NS37 354 aa16.7■□□□□ 0.26
CTSS-202ENST00000448301 TLL2Q9Y6L7 1015 aa16.7■□□□□ 0.26
CTSS-202ENST00000448301 GREB1LQ9C091 1923 aaPredicted RBP16.7■□□□□ 0.26
CTSS-202ENST00000448301 PHIPQ8WWQ0 1821 aa16.7■□□□□ 0.26
CTSS-202ENST00000448301 SMIM22K7EJ46 135 aa16.7■□□□□ 0.26
CTSS-202ENST00000448301 REC8O95072 547 aa16.7■□□□□ 0.26
CTSS-202ENST00000448301 SLC3A2P08195 630 aaKnown RBP16.7■□□□□ 0.26
CTSS-202ENST00000448301 LDLRAD1Q5T700 205 aa16.7■□□□□ 0.26
CTSS-202ENST00000448301 TATDN1Q6P1N9 297 aa16.7■□□□□ 0.26
CTSS-202ENST00000448301 ANKRD13AQ8IZ07 590 aa16.7■□□□□ 0.26
CTSS-202ENST00000448301 DYNLL2Q96FJ2 89 aa16.7■□□□□ 0.26
CTSS-202ENST00000448301 WRNIP1Q96S55 665 aa16.7■□□□□ 0.26
CTSS-202ENST00000448301 ZNF213O14771 459 aa16.69■□□□□ 0.26
CTSS-202ENST00000448301 EPB41L2O43491 1005 aaKnown RBP16.69■□□□□ 0.26
CTSS-202ENST00000448301 EIF5BO60841 1220 aaKnown RBP16.69■□□□□ 0.26
CTSS-202ENST00000448301 SHMT1P34896 483 aa16.69■□□□□ 0.26
CTSS-202ENST00000448301 CDK8P49336 464 aa16.69■□□□□ 0.26
CTSS-202ENST00000448301 MAP3K9P80192 1104 aa16.69■□□□□ 0.26
CTSS-202ENST00000448301 IMMTQ16891 758 aaKnown RBP16.69■□□□□ 0.26
CTSS-202ENST00000448301 SAPCD2Q86UD0 394 aa16.69■□□□□ 0.26
CTSS-202ENST00000448301 ZNF287Q9HBT7 754 aa16.69■□□□□ 0.26
CTSS-202ENST00000448301 RBM8AQ9Y5S9 174 aaKnown RBP16.69■□□□□ 0.26
CTSS-202ENST00000448301 UBE2Q2LH0YL09 131 aa16.68■□□□□ 0.26
CTSS-202ENST00000448301 HUNKP57058 714 aa16.68■□□□□ 0.26
CTSS-202ENST00000448301 PDE4BQ07343 736 aa16.68■□□□□ 0.26
CTSS-202ENST00000448301 C8orf34Q49A92 452 aa16.68■□□□□ 0.26
CTSS-202ENST00000448301 NOL9Q5SY16 702 aaKnown RBP16.68■□□□□ 0.26
CTSS-202ENST00000448301 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.68■□□□□ 0.26
CTSS-202ENST00000448301 SLC44A5Q8NCS7 719 aa16.68■□□□□ 0.26
CTSS-202ENST00000448301 CTNND1O60716 968 aaKnown RBP16.67■□□□□ 0.26
CTSS-202ENST00000448301 FGRP09769 529 aa16.67■□□□□ 0.26
CTSS-202ENST00000448301 PCP11498 1178 aaKnown RBP16.67■□□□□ 0.26
CTSS-202ENST00000448301 INPP5BP32019 993 aa16.67■□□□□ 0.26
CTSS-202ENST00000448301 CAP2P40123 477 aa16.67■□□□□ 0.26
CTSS-202ENST00000448301 HAND2P61296 217 aa16.67■□□□□ 0.26
CTSS-202ENST00000448301 CTDSPL2Q05D32 466 aa16.67■□□□□ 0.26
CTSS-202ENST00000448301 VGLL4Q14135 290 aa16.67■□□□□ 0.26
CTSS-202ENST00000448301 RRP1BQ14684 758 aaKnown RBP16.67■□□□□ 0.26
CTSS-202ENST00000448301 HHIPL1Q96JK4 782 aa16.67■□□□□ 0.26
CTSS-202ENST00000448301 NBPF3Q9H094 633 aa16.67■□□□□ 0.26
CTSS-202ENST00000448301 GINM1Q9NU53 330 aa16.67■□□□□ 0.26
CTSS-202ENST00000448301 ABT1Q9ULW3 272 aaKnown RBP16.67■□□□□ 0.26
CTSS-202ENST00000448301 CSADQ9Y600 493 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms