RNA–Protein interactions for RNA: ENST00000448190.6

SNHG4-201, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-201ENST00000448190 WBP1LQ9NX94 342 aa16.08■□□□□ 0.16
SNHG4-201ENST00000448190 TSKSQ9UJT2 592 aa16.08■□□□□ 0.16
SNHG4-201ENST00000448190 ATRNL1Q5VV63 1379 aa16.08■□□□□ 0.16
SNHG4-201ENST00000448190 MYH2Q9UKX2 1941 aa16.07■□□□□ 0.16
SNHG4-201ENST00000448190 GPAA1O43292 621 aa16.07■□□□□ 0.16
SNHG4-201ENST00000448190 TBC1D12O60347 775 aa16.07■□□□□ 0.16
SNHG4-201ENST00000448190 APPP05067 770 aa16.07■□□□□ 0.16
SNHG4-201ENST00000448190 HLA-DOAP06340 250 aa16.07■□□□□ 0.16
SNHG4-201ENST00000448190 MAP2K1Q02750 393 aaPredicted RBP16.07■□□□□ 0.16
SNHG4-201ENST00000448190 LRRFIP1Q32MZ4 808 aaKnown RBP16.07■□□□□ 0.16
SNHG4-201ENST00000448190 CENPQQ7L2Z9 268 aaPredicted RBP16.07■□□□□ 0.16
SNHG4-201ENST00000448190 FOXP4Q8IVH2 680 aaPredicted RBP16.07■□□□□ 0.16
SNHG4-201ENST00000448190 FAM227BQ96M60 508 aa16.07■□□□□ 0.16
SNHG4-201ENST00000448190 TRIM34Q9BYJ4 488 aa16.07■□□□□ 0.16
SNHG4-201ENST00000448190 UNCXA6NJT0 531 aa16.06■□□□□ 0.16
SNHG4-201ENST00000448190 USP17L12C9JPN9 530 aa16.06■□□□□ 0.16
SNHG4-201ENST00000448190 USP17L21D6R901 530 aa16.06■□□□□ 0.16
SNHG4-201ENST00000448190 JAG1P78504 1218 aa16.06■□□□□ 0.16
SNHG4-201ENST00000448190 SHROOM1Q2M3G4 852 aaPredicted RBP16.06■□□□□ 0.16
SNHG4-201ENST00000448190 TTC6Q86TZ1 520 aa16.06■□□□□ 0.16
SNHG4-201ENST00000448190 STK11IPQ8N1F8 1099 aa16.06■□□□□ 0.16
SNHG4-201ENST00000448190 DYNLL2Q96FJ2 89 aa16.06■□□□□ 0.16
SNHG4-201ENST00000448190 DNAJC18Q9H819 358 aa16.06■□□□□ 0.16
SNHG4-201ENST00000448190 TRPM7Q96QT4 1865 aa16.05■□□□□ 0.16
SNHG4-201ENST00000448190 PAPPA2Q9BXP8 1791 aa16.05■□□□□ 0.16
SNHG4-201ENST00000448190 GSG1L2A8MUP6 293 aa16.05■□□□□ 0.16
SNHG4-201ENST00000448190 IRF6O14896 467 aa16.05■□□□□ 0.16
SNHG4-201ENST00000448190 FOXN1O15353 648 aa16.05■□□□□ 0.16
SNHG4-201ENST00000448190 TRPA1O75762 1119 aa16.05■□□□□ 0.16
SNHG4-201ENST00000448190 GSPT1P15170 499 aaKnown RBP16.05■□□□□ 0.16
SNHG4-201ENST00000448190 SDSP20132 328 aa16.05■□□□□ 0.16
SNHG4-201ENST00000448190 NMIQ13287 307 aaPredicted RBP16.05■□□□□ 0.16
SNHG4-201ENST00000448190 ERO1BQ86YB8 467 aa16.05■□□□□ 0.16
SNHG4-201ENST00000448190 SCYL3Q8IZE3 742 aa16.05■□□□□ 0.16
SNHG4-201ENST00000448190 BEGAINQ9BUH8 593 aa16.05■□□□□ 0.16
SNHG4-201ENST00000448190 PICK1Q9NRD5 415 aa16.05■□□□□ 0.16
SNHG4-201ENST00000448190 ATP8A2Q9NTI2 1148 aa16.05■□□□□ 0.16
SNHG4-201ENST00000448190 ZHX2Q9Y6X8 837 aa16.05■□□□□ 0.16
SNHG4-201ENST00000448190 A0A0D9SFI3 127 aa16.04■□□□□ 0.16
SNHG4-201ENST00000448190 SPDYE5A6NIY4 337 aa16.04■□□□□ 0.16
SNHG4-201ENST00000448190 PATL2C9JE40 543 aaKnown RBP16.04■□□□□ 0.16
SNHG4-201ENST00000448190 CTNND1O60716 968 aaKnown RBP16.04■□□□□ 0.16
SNHG4-201ENST00000448190 GDF11O95390 407 aa16.04■□□□□ 0.16
SNHG4-201ENST00000448190 TTC22Q5TAA0 569 aa16.04■□□□□ 0.16
SNHG4-201ENST00000448190 CTR9Q6PD62 1173 aa16.04■□□□□ 0.16
SNHG4-201ENST00000448190 RNF186Q9NXI6 227 aa16.04■□□□□ 0.16
SNHG4-201ENST00000448190 HERC5Q9UII4 1024 aaKnown RBP16.04■□□□□ 0.16
SNHG4-201ENST00000448190 SERPINB13Q9UIV8 391 aa16.04■□□□□ 0.16
SNHG4-201ENST00000448190 MINDY4BA8MYZ0 360 aa16.03■□□□□ 0.16
SNHG4-201ENST00000448190 ZBTB48P10074 688 aaPredicted RBP16.03■□□□□ 0.16
SNHG4-201ENST00000448190 PTPRAP18433 802 aa16.03■□□□□ 0.16
SNHG4-201ENST00000448190 CAP2P40123 477 aa16.03■□□□□ 0.16
SNHG4-201ENST00000448190 TM4SF4P48230 202 aa16.03■□□□□ 0.16
SNHG4-201ENST00000448190 METTL16Q86W50 562 aaKnown RBP16.03■□□□□ 0.16
SNHG4-201ENST00000448190 SLC44A5Q8NCS7 719 aa16.03■□□□□ 0.16
SNHG4-201ENST00000448190 DDRGK1Q96HY6 314 aa16.03■□□□□ 0.16
SNHG4-201ENST00000448190 MS4A4AQ96JQ5 239 aa16.03■□□□□ 0.16
SNHG4-201ENST00000448190 PTPN18Q99952 460 aa16.03■□□□□ 0.16
SNHG4-201ENST00000448190 MYO5AQ9Y4I1 1855 aaKnown RBP16.03■□□□□ 0.16
SNHG4-201ENST00000448190 MANSC4A6NHS7 340 aaPredicted RBP16.02■□□□□ 0.16
SNHG4-201ENST00000448190 PPATQ06203 517 aa16.02■□□□□ 0.16
SNHG4-201ENST00000448190 MCMDC2Q4G0Z9 681 aa16.02■□□□□ 0.16
SNHG4-201ENST00000448190 NOL9Q5SY16 702 aaKnown RBP16.02■□□□□ 0.16
SNHG4-201ENST00000448190 C12orf60Q5U649 245 aa16.02■□□□□ 0.16
SNHG4-201ENST00000448190 VPS53Q5VIR6 699 aa16.02■□□□□ 0.16
SNHG4-201ENST00000448190 CWC27Q6UX04 472 aaKnown RBP16.02■□□□□ 0.16
SNHG4-201ENST00000448190 BRI3BPQ8WY22 251 aa16.02■□□□□ 0.16
SNHG4-201ENST00000448190 EPB41L4AQ9HCS5 686 aaPredicted RBP16.02■□□□□ 0.16
SNHG4-201ENST00000448190 HELLSQ9NRZ9 838 aa16.02■□□□□ 0.16
SNHG4-201ENST00000448190 PPP4R2Q9NY27 417 aa16.02■□□□□ 0.16
SNHG4-201ENST00000448190 CCL15-CCL14A0A0B4J2E2 113 aa16.01■□□□□ 0.15
SNHG4-201ENST00000448190 TRIM75PA6NK02 468 aa16.01■□□□□ 0.15
SNHG4-201ENST00000448190 TBC1D8O95759 1140 aa16.01■□□□□ 0.15
SNHG4-201ENST00000448190 SHMT1P34896 483 aa16.01■□□□□ 0.15
SNHG4-201ENST00000448190 TDO2P48775 406 aa16.01■□□□□ 0.15
SNHG4-201ENST00000448190 GTF2A2P52657 109 aa16.01■□□□□ 0.15
SNHG4-201ENST00000448190 SREBF2Q12772 1141 aa16.01■□□□□ 0.15
SNHG4-201ENST00000448190 PPIL2Q13356 520 aa16.01■□□□□ 0.15
SNHG4-201ENST00000448190 CCL15Q16663 113 aa16.01■□□□□ 0.15
SNHG4-201ENST00000448190 CERKLQ49MI3 558 aaPredicted RBP16.01■□□□□ 0.15
SNHG4-201ENST00000448190 IFNL3Q8IZI9 196 aa16.01■□□□□ 0.15
SNHG4-201ENST00000448190 COL2A1P02458 1487 aaPredicted RBP16■□□□□ 0.15
SNHG4-201ENST00000448190 IGF2BP3O00425 579 aaKnown RBP eCLIP16■□□□□ 0.15
SNHG4-201ENST00000448190 GH2P01242 217 aa16■□□□□ 0.15
SNHG4-201ENST00000448190 GNAT2P19087 354 aa16■□□□□ 0.15
SNHG4-201ENST00000448190 LBX1P52954 281 aa16■□□□□ 0.15
SNHG4-201ENST00000448190 GABPAQ06546 454 aa16■□□□□ 0.15
SNHG4-201ENST00000448190 SPP2Q13103 211 aa16■□□□□ 0.15
SNHG4-201ENST00000448190 SNAPC2Q13487 334 aa16■□□□□ 0.15
SNHG4-201ENST00000448190 TATDN1Q6P1N9 297 aa16■□□□□ 0.15
SNHG4-201ENST00000448190 ZNF589Q86UQ0 364 aaPredicted RBP16■□□□□ 0.15
SNHG4-201ENST00000448190 IFNL1Q8IU54 200 aa16■□□□□ 0.15
SNHG4-201ENST00000448190 AMOTL1Q8IY63 956 aa16■□□□□ 0.15
SNHG4-201ENST00000448190 EHD4Q9H223 541 aa16■□□□□ 0.15
SNHG4-201ENST00000448190 R3HDMLQ9H3Y0 253 aa16■□□□□ 0.15
SNHG4-201ENST00000448190 DIAPH3Q9NSV4 1193 aa16■□□□□ 0.15
SNHG4-201ENST00000448190 AFG3L2Q9Y4W6 797 aa16■□□□□ 0.15
SNHG4-201ENST00000448190 ECM29Q5VYK3 1845 aa16■□□□□ 0.15
SNHG4-201ENST00000448190 MPHOSPH10O00566 681 aaKnown RBP15.99■□□□□ 0.15
SNHG4-201ENST00000448190 FOXP2O15409 715 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms