RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 E7EVH7 732 aa5.63□□□□□ -1.51
HERC1-201ENST00000443617 GUCY1A3Q02108 690 aa5.63□□□□□ -1.51
HERC1-201ENST00000443617 GKAP1Q5VSY0 366 aaPredicted RBP5.63□□□□□ -1.51
HERC1-201ENST00000443617 KCTD16Q68DU8 428 aa5.63□□□□□ -1.51
HERC1-201ENST00000443617 NOX5Q96PH1 765 aa5.63□□□□□ -1.51
HERC1-201ENST00000443617 HELLSQ9NRZ9 838 aa5.63□□□□□ -1.51
HERC1-201ENST00000443617 LRRIQ3A6PVS8 624 aaPredicted RBP5.63□□□□□ -1.51
HERC1-201ENST00000443617 ANXA1P04083 346 aa5.63□□□□□ -1.51
HERC1-201ENST00000443617 CASP14P31944 242 aa5.63□□□□□ -1.51
HERC1-201ENST00000443617 METAP2P50579 478 aaKnown RBP eCLIP5.63□□□□□ -1.51
HERC1-201ENST00000443617 TRAPPC11Q7Z392 1133 aa5.63□□□□□ -1.51
HERC1-201ENST00000443617 CCDC47Q96A33 483 aaKnown RBP5.63□□□□□ -1.51
HERC1-201ENST00000443617 TRIM75PA6NK02 468 aa5.63□□□□□ -1.51
HERC1-201ENST00000443617 SLC8A3P57103 927 aa5.63□□□□□ -1.51
HERC1-201ENST00000443617 KIF5AQ12840 1032 aa5.63□□□□□ -1.51
HERC1-201ENST00000443617 RAD9BQ6WBX8 426 aa5.63□□□□□ -1.51
HERC1-201ENST00000443617 ACTR5Q9H9F9 607 aaPredicted RBP5.63□□□□□ -1.51
HERC1-201ENST00000443617 GUCY2FP51841 1108 aa5.63□□□□□ -1.51
HERC1-201ENST00000443617 LINS1Q8NG48 757 aa5.63□□□□□ -1.51
HERC1-201ENST00000443617 CCDC42Q96M95 316 aa5.63□□□□□ -1.51
HERC1-201ENST00000443617 LUC7L3O95232 432 aaKnown RBP5.63□□□□□ -1.51
HERC1-201ENST00000443617 WDR93Q6P2C0 686 aa5.63□□□□□ -1.51
HERC1-201ENST00000443617 IL17REQ8NFR9 667 aa5.63□□□□□ -1.51
HERC1-201ENST00000443617 EID1Q9Y6B2 187 aa5.63□□□□□ -1.51
HERC1-201ENST00000443617 ENC1O14682 589 aa5.63□□□□□ -1.51
HERC1-201ENST00000443617 KIF4AO95239 1232 aa5.63□□□□□ -1.51
HERC1-201ENST00000443617 TFCP2Q12800 502 aa5.63□□□□□ -1.51
HERC1-201ENST00000443617 MORC3Q14149 939 aa5.63□□□□□ -1.51
HERC1-201ENST00000443617 CAPRIN2Q6IMN6 1127 aaKnown RBP5.63□□□□□ -1.51
HERC1-201ENST00000443617 NLRP14Q86W24 1093 aa5.63□□□□□ -1.51
HERC1-201ENST00000443617 NELFBQ8WX92 580 aa5.63□□□□□ -1.51
HERC1-201ENST00000443617 LAMC1P11047 1609 aa5.63□□□□□ -1.51
HERC1-201ENST00000443617 TEX33O43247 280 aa5.63□□□□□ -1.51
HERC1-201ENST00000443617 MRPS25P82663 173 aaKnown RBP5.63□□□□□ -1.51
HERC1-201ENST00000443617 FMR1Q06787 632 aaKnown RBP eCLIP5.63□□□□□ -1.512e-6■■■□□ 17.8
HERC1-201ENST00000443617 NCOA7Q8NI08 942 aa5.63□□□□□ -1.51
HERC1-201ENST00000443617 SAMSN1Q9NSI8 373 aaKnown RBP5.63□□□□□ -1.51
HERC1-201ENST00000443617 TAF6LQ9Y6J9 622 aa5.63□□□□□ -1.51
HERC1-201ENST00000443617 PDE4BQ07343 736 aa5.63□□□□□ -1.51
HERC1-201ENST00000443617 ZNF530Q6P9A1 599 aaPredicted RBP5.63□□□□□ -1.51
HERC1-201ENST00000443617 ARFGAP2Q8N6H7 521 aa5.63□□□□□ -1.51
HERC1-201ENST00000443617 UBAC1Q9BSL1 405 aa5.63□□□□□ -1.51
HERC1-201ENST00000443617 PLCH2O75038 1416 aa5.62□□□□□ -1.51
HERC1-201ENST00000443617 CTDNEP1O95476 244 aa5.62□□□□□ -1.51
HERC1-201ENST00000443617 INCENPQ9NQS7 918 aa5.62□□□□□ -1.51
HERC1-201ENST00000443617 IDEP14735 1019 aa5.62□□□□□ -1.51
HERC1-201ENST00000443617 ZNF18P17022 549 aa5.62□□□□□ -1.51
HERC1-201ENST00000443617 FKBP4Q02790 459 aaKnown RBP eCLIP5.62□□□□□ -1.51
HERC1-201ENST00000443617 PPARDQ03181 441 aa5.62□□□□□ -1.51
HERC1-201ENST00000443617 CACNA2D3Q8IZS8 1091 aa5.62□□□□□ -1.51
HERC1-201ENST00000443617 RUBCNQ92622 972 aa5.62□□□□□ -1.51
HERC1-201ENST00000443617 ZKSCAN4Q969J2 545 aaPredicted RBP5.62□□□□□ -1.51
HERC1-201ENST00000443617 ATP6V0A4Q9HBG4 840 aa5.62□□□□□ -1.51
HERC1-201ENST00000443617 KCNJ18B7U540 433 aa5.62□□□□□ -1.51
HERC1-201ENST00000443617 PSMD14O00487 310 aa5.62□□□□□ -1.51
HERC1-201ENST00000443617 KIF23Q02241 960 aaPredicted RBP5.62□□□□□ -1.51
HERC1-201ENST00000443617 KCNJ12Q14500 433 aa5.62□□□□□ -1.51
HERC1-201ENST00000443617 C1orf141Q5JVX7 400 aa5.62□□□□□ -1.51
HERC1-201ENST00000443617 DDX46Q7L014 1031 aaKnown RBP5.62□□□□□ -1.51
HERC1-201ENST00000443617 MAGEC3Q8TD91 643 aa5.62□□□□□ -1.51
HERC1-201ENST00000443617 NUP133Q8WUM0 1156 aa5.62□□□□□ -1.51
HERC1-201ENST00000443617 SLC26A6Q9BXS9 759 aa5.62□□□□□ -1.51
HERC1-201ENST00000443617 AATKQ6ZMQ8 1374 aa5.62□□□□□ -1.51
HERC1-201ENST00000443617 EPB41P11171 864 aaKnown RBP5.62□□□□□ -1.51
HERC1-201ENST00000443617 CUL5Q93034 780 aa5.62□□□□□ -1.51
HERC1-201ENST00000443617 EDC3Q96F86 508 aaKnown RBP5.62□□□□□ -1.51
HERC1-201ENST00000443617 CALR3Q96L12 384 aaKnown RBP5.62□□□□□ -1.51
HERC1-201ENST00000443617 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.62□□□□□ -1.51
HERC1-201ENST00000443617 ARHGEF10O15013 1369 aa5.62□□□□□ -1.51
HERC1-201ENST00000443617 ASXL2Q76L83 1435 aa5.62□□□□□ -1.51
HERC1-201ENST00000443617 NUTM2BA6NNL0 878 aaPredicted RBP5.62□□□□□ -1.51
HERC1-201ENST00000443617 NUTM2EB1AL46 878 aaPredicted RBP5.62□□□□□ -1.51
HERC1-201ENST00000443617 HLTFQ14527 1009 aaKnown RBP eCLIP5.62□□□□□ -1.51
HERC1-201ENST00000443617 MICU3Q86XE3 530 aa5.62□□□□□ -1.51
HERC1-201ENST00000443617 ELOA2Q8IYF1 753 aaPredicted RBP5.62□□□□□ -1.51
HERC1-201ENST00000443617 LUC7LQ9NQ29 371 aaKnown RBP5.62□□□□□ -1.51
HERC1-201ENST00000443617 TBC1D2BQ9UPU7 963 aa5.62□□□□□ -1.51
HERC1-201ENST00000443617 ADGRL3Q9HAR2 1447 aa5.62□□□□□ -1.51
HERC1-201ENST00000443617 TBC1D31Q96DN5 1066 aa5.62□□□□□ -1.51
HERC1-201ENST00000443617 INTS13Q9NVM9 706 aa5.62□□□□□ -1.51
HERC1-201ENST00000443617 TFRCP02786 760 aaKnown RBP5.62□□□□□ -1.51
HERC1-201ENST00000443617 DNA2P51530 1060 aa5.62□□□□□ -1.51
HERC1-201ENST00000443617 E2F5Q15329 346 aa5.62□□□□□ -1.51
HERC1-201ENST00000443617 GSPT2Q8IYD1 628 aaKnown RBP5.62□□□□□ -1.51
HERC1-201ENST00000443617 CCDC13Q8IYE1 715 aa5.62□□□□□ -1.51
HERC1-201ENST00000443617 GRAMD1CQ8IYS0 662 aa5.62□□□□□ -1.51
HERC1-201ENST00000443617 LMBR1Q8WVP7 490 aa5.62□□□□□ -1.51
HERC1-201ENST00000443617 HVCN1Q96D96 273 aa5.62□□□□□ -1.51
HERC1-201ENST00000443617 SUCLG2Q96I99 432 aa5.62□□□□□ -1.51
HERC1-201ENST00000443617 DSCC1Q9BVC3 393 aa5.62□□□□□ -1.51
HERC1-201ENST00000443617 HAUS2Q9NVX0 235 aa5.62□□□□□ -1.51
HERC1-201ENST00000443617 ARHGEF5Q12774 1597 aa5.62□□□□□ -1.51
HERC1-201ENST00000443617 HAUS4Q9H6D7 363 aa5.62□□□□□ -1.51
HERC1-201ENST00000443617 SYNRGQ9UMZ2 1314 aa5.62□□□□□ -1.51
HERC1-201ENST00000443617 UNC13AQ9UPW8 1703 aa5.62□□□□□ -1.51
HERC1-201ENST00000443617 KRT31Q15323 416 aa5.62□□□□□ -1.51
HERC1-201ENST00000443617 TAX1BP1Q86VP1 789 aa5.62□□□□□ -1.51
HERC1-201ENST00000443617 P3H4Q92791 437 aa5.62□□□□□ -1.51
HERC1-201ENST00000443617 STIM2Q9P246 746 aa5.62□□□□□ -1.51
HERC1-201ENST00000443617 FANCGO15287 622 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms