RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 TAF1CQ15572 869 aaPredicted RBP8.13□□□□□ -1.11
VPS50-206ENST00000443443 UBE3DQ7Z6J8 389 aa8.13□□□□□ -1.11
VPS50-206ENST00000443443 PRDM10Q9NQV6 1147 aa8.13□□□□□ -1.11
VPS50-206ENST00000443443 PCDHB5Q9Y5E4 795 aa8.13□□□□□ -1.11
VPS50-206ENST00000443443 ITIH2P19823 946 aa8.12□□□□□ -1.11
VPS50-206ENST00000443443 NTF4P34130 210 aa8.12□□□□□ -1.11
VPS50-206ENST00000443443 CDK8P49336 464 aa8.12□□□□□ -1.11
VPS50-206ENST00000443443 SEPT6Q14141 434 aa8.12□□□□□ -1.11
VPS50-206ENST00000443443 WIPI1Q5MNZ9 446 aaPredicted RBP8.12□□□□□ -1.11
VPS50-206ENST00000443443 STK11IPQ8N1F8 1099 aa8.12□□□□□ -1.11
VPS50-206ENST00000443443 BCL7CQ8WUZ0 217 aaPredicted RBP8.12□□□□□ -1.11
VPS50-206ENST00000443443 MRS2Q9HD23 443 aa8.12□□□□□ -1.11
VPS50-206ENST00000443443 SNCAIPQ9Y6H5 919 aa8.12□□□□□ -1.11
VPS50-206ENST00000443443 LIG3P49916 1009 aa8.11□□□□□ -1.11
VPS50-206ENST00000443443 RPS26P62854 115 aaKnown RBP8.11□□□□□ -1.11
VPS50-206ENST00000443443 TAGLNQ01995 201 aaKnown RBP8.11□□□□□ -1.11
VPS50-206ENST00000443443 HOMEZQ8IX15 550 aa8.11□□□□□ -1.11
VPS50-206ENST00000443443 AGBL5Q8NDL9 886 aa8.11□□□□□ -1.11
VPS50-206ENST00000443443 JARID2Q92833 1246 aaPredicted RBP8.11□□□□□ -1.11
VPS50-206ENST00000443443 MIR1-1HGQ9H1L0 117 aa8.11□□□□□ -1.11
VPS50-206ENST00000443443 PAK6Q9NQU5 681 aaPredicted RBP8.11□□□□□ -1.11
VPS50-206ENST00000443443 GTF2IRD1Q9UHL9 959 aa8.11□□□□□ -1.11
VPS50-206ENST00000443443 ADGRE2Q9UHX3 823 aa8.11□□□□□ -1.11
VPS50-206ENST00000443443 PAX4O43316 350 aa8.1□□□□□ -1.11
VPS50-206ENST00000443443 OXCT1P55809 520 aa8.1□□□□□ -1.11
VPS50-206ENST00000443443 IFI16Q16666 785 aaKnown RBP8.1□□□□□ -1.11
VPS50-206ENST00000443443 ZNF574Q6ZN55 896 aaPredicted RBP8.1□□□□□ -1.11
VPS50-206ENST00000443443 NFXL1Q6ZNB6 911 aa8.1□□□□□ -1.11
VPS50-206ENST00000443443 AGMOQ6ZNB7 445 aa8.1□□□□□ -1.11
VPS50-206ENST00000443443 CYFIP1Q7L576 1253 aa8.1□□□□□ -1.11
VPS50-206ENST00000443443 TMC4Q7Z404 712 aa8.1□□□□□ -1.11
VPS50-206ENST00000443443 SPRED2Q7Z698 418 aa8.1□□□□□ -1.11
VPS50-206ENST00000443443 GAL3ST3Q96A11 431 aa8.1□□□□□ -1.11
VPS50-206ENST00000443443 MISP3Q96FF7 219 aa8.1□□□□□ -1.11
VPS50-206ENST00000443443 HEXIM2Q96MH2 286 aaKnown RBP8.1□□□□□ -1.11
VPS50-206ENST00000443443 WNT10AQ9GZT5 417 aa8.1□□□□□ -1.11
VPS50-206ENST00000443443 SORBS3O60504 671 aa8.09□□□□□ -1.11
VPS50-206ENST00000443443 RLBP1P12271 317 aa8.09□□□□□ -1.11
VPS50-206ENST00000443443 ERCC3P19447 782 aa8.09□□□□□ -1.11
VPS50-206ENST00000443443 PLCL1Q15111 1095 aa8.09□□□□□ -1.11
VPS50-206ENST00000443443 AOC3Q16853 763 aa8.09□□□□□ -1.11
VPS50-206ENST00000443443 ARMCX6Q7L4S7 300 aa8.09□□□□□ -1.11
VPS50-206ENST00000443443 FBXO33Q7Z6M2 555 aa8.09□□□□□ -1.11
VPS50-206ENST00000443443 MKNK2Q9HBH9 465 aa8.09□□□□□ -1.11
VPS50-206ENST00000443443 VTI1BQ9UEU0 232 aa8.09□□□□□ -1.11
VPS50-206ENST00000443443 U3KQE9 123 aa8.09□□□□□ -1.11
VPS50-206ENST00000443443 TMEM265A0A087WTH1 108 aa8.08□□□□□ -1.12
VPS50-206ENST00000443443 LRIG2O94898 1065 aa8.08□□□□□ -1.12
VPS50-206ENST00000443443 CEACAM5P06731 702 aa8.08□□□□□ -1.12
VPS50-206ENST00000443443 GRK4P32298 578 aa8.08□□□□□ -1.12
VPS50-206ENST00000443443 DIEXFQ68CQ4 756 aaKnown RBP8.08□□□□□ -1.12
VPS50-206ENST00000443443 HID1Q8IV36 788 aa8.08□□□□□ -1.12
VPS50-206ENST00000443443 KRTAP9-9Q9BYP9 154 aa8.08□□□□□ -1.12
VPS50-206ENST00000443443 KRTAP9-4Q9BYQ2 154 aa8.08□□□□□ -1.12
VPS50-206ENST00000443443 FOXQ1Q9C009 403 aa8.08□□□□□ -1.12
VPS50-206ENST00000443443 FBRSQ9HAH7 460 aa8.08□□□□□ -1.12
VPS50-206ENST00000443443 GOLGA2P5Q9HBQ8 144 aa8.08□□□□□ -1.12
VPS50-206ENST00000443443 VAV3Q9UKW4 847 aa8.08□□□□□ -1.12
VPS50-206ENST00000443443 TPX2Q9ULW0 747 aaKnown RBP8.08□□□□□ -1.12
VPS50-206ENST00000443443 TLR6Q9Y2C9 796 aa8.08□□□□□ -1.12
VPS50-206ENST00000443443 GNAT3A8MTJ3 354 aa8.07□□□□□ -1.12
VPS50-206ENST00000443443 F6X3S4 739 aa8.07□□□□□ -1.12
VPS50-206ENST00000443443 CTSHP09668 335 aa8.07□□□□□ -1.12
VPS50-206ENST00000443443 CD8BP10966 210 aa8.07□□□□□ -1.12
VPS50-206ENST00000443443 TFE3P19532 575 aaPredicted RBP8.07□□□□□ -1.12
VPS50-206ENST00000443443 CD96P40200 585 aa8.07□□□□□ -1.12
VPS50-206ENST00000443443 PRKCQQ04759 706 aa8.07□□□□□ -1.12
VPS50-206ENST00000443443 XAGE3Q8WTP9 111 aa8.07□□□□□ -1.12
VPS50-206ENST00000443443 HRASLS5Q96KN8 279 aa8.07□□□□□ -1.12
VPS50-206ENST00000443443 NOC4LQ9BVI4 516 aaKnown RBP8.07□□□□□ -1.12
VPS50-206ENST00000443443 PLAGL2Q9UPG8 496 aa8.07□□□□□ -1.12
VPS50-206ENST00000443443 USP31Q70CQ4 1352 aa8.07□□□□□ -1.12
VPS50-206ENST00000443443 EOMESO95936 686 aa8.06□□□□□ -1.12
VPS50-206ENST00000443443 ST13P50502 369 aaKnown RBP8.06□□□□□ -1.12
VPS50-206ENST00000443443 NKG7Q16617 165 aa8.06□□□□□ -1.12
VPS50-206ENST00000443443 TSNAXIP1Q2TAA8 658 aa8.06□□□□□ -1.12
VPS50-206ENST00000443443 FAM214BQ7L5A3 538 aa8.06□□□□□ -1.12
VPS50-206ENST00000443443 MIPEPQ99797 713 aa8.06□□□□□ -1.12
VPS50-206ENST00000443443 PRDM5Q9NQX1 630 aaPredicted RBP8.06□□□□□ -1.12
VPS50-206ENST00000443443 IGF2BP3O00425 579 aaKnown RBP eCLIP8.05□□□□□ -1.12
VPS50-206ENST00000443443 GFRA2O00451 464 aa8.05□□□□□ -1.12
VPS50-206ENST00000443443 ITGAEP38570 1179 aa8.05□□□□□ -1.12
VPS50-206ENST00000443443 SLBPQ14493 270 aaKnown RBP eCLIP8.05□□□□□ -1.12
VPS50-206ENST00000443443 RELL1Q8IUW5 271 aa8.05□□□□□ -1.12
VPS50-206ENST00000443443 SLITRK5O94991 958 aa8.04□□□□□ -1.12
VPS50-206ENST00000443443 PGRP06401 933 aa8.04□□□□□ -1.12
VPS50-206ENST00000443443 MFSD2AQ8NA29 543 aa8.04□□□□□ -1.12
VPS50-206ENST00000443443 PI4K2BQ8TCG2 481 aa8.04□□□□□ -1.12
VPS50-206ENST00000443443 CRELD1Q96HD1 420 aa8.04□□□□□ -1.12
VPS50-206ENST00000443443 BCL2L13Q9BXK5 485 aa8.04□□□□□ -1.12
VPS50-206ENST00000443443 RNF114Q9Y508 228 aa8.04□□□□□ -1.12
VPS50-206ENST00000443443 FAM155AB1AL88 458 aaPredicted RBP8.03□□□□□ -1.12
VPS50-206ENST00000443443 GBP2P32456 591 aaPredicted RBP8.03□□□□□ -1.12
VPS50-206ENST00000443443 PDE4BQ07343 736 aa8.03□□□□□ -1.12
VPS50-206ENST00000443443 ZNF792Q3KQV3 632 aa8.03□□□□□ -1.12
VPS50-206ENST00000443443 PRAMEF13Q5VWM6 474 aa8.03□□□□□ -1.12
VPS50-206ENST00000443443 PHC3Q8NDX5 983 aa8.03□□□□□ -1.12
VPS50-206ENST00000443443 RIN3Q8TB24 985 aa8.03□□□□□ -1.12
VPS50-206ENST00000443443 SNX11Q9Y5W9 270 aa8.03□□□□□ -1.12
VPS50-206ENST00000443443 MINDY4BA8MYZ0 360 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms