RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 DZIP1Q86YF9 867 aaKnown RBP17.91■□□□□ 0.46
HMGN1-208ENST00000443046 C7orf61Q8IZ16 206 aa17.91■□□□□ 0.46
HMGN1-208ENST00000443046 NBPF3Q9H094 633 aa17.91■□□□□ 0.46
HMGN1-208ENST00000443046 OSBPL5Q9H0X9 879 aaPredicted RBP17.91■□□□□ 0.46
HMGN1-208ENST00000443046 TAOK2Q9UL54 1235 aa17.91■□□□□ 0.46
HMGN1-208ENST00000443046 OGDHLQ9ULD0 1010 aa17.91■□□□□ 0.46
HMGN1-208ENST00000443046 DDX60LQ5H9U9 1706 aaKnown RBP17.91■□□□□ 0.46
HMGN1-208ENST00000443046 PRUNE2Q8WUY3 3088 aa17.91■□□□□ 0.46
HMGN1-208ENST00000443046 MROH7-TTC4A0A0A0MT08 1334 aa17.91■□□□□ 0.46
HMGN1-208ENST00000443046 COL2A1P02458 1487 aaPredicted RBP17.9■□□□□ 0.46
HMGN1-208ENST00000443046 SPP2Q13103 211 aa17.9■□□□□ 0.46
HMGN1-208ENST00000443046 PICALMQ13492 652 aa17.9■□□□□ 0.46
HMGN1-208ENST00000443046 MAP3K21Q5TCX8 1036 aa17.9■□□□□ 0.46
HMGN1-208ENST00000443046 DEFB123Q8N688 67 aa17.9■□□□□ 0.46
HMGN1-208ENST00000443046 ZNF280CQ8ND82 737 aa17.9■□□□□ 0.46
HMGN1-208ENST00000443046 TBC1D2Q9BYX2 928 aa17.9■□□□□ 0.46
HMGN1-208ENST00000443046 HMX1Q9NP08 348 aaPredicted RBP17.9■□□□□ 0.46
HMGN1-208ENST00000443046 COPRSQ9NQ92 184 aa17.9■□□□□ 0.46
HMGN1-208ENST00000443046 ZMYND8Q9ULU4 1186 aaPredicted RBP17.9■□□□□ 0.46
HMGN1-208ENST00000443046 ATAD5Q96QE3 1844 aa17.9■□□□□ 0.46
HMGN1-208ENST00000443046 MAP4K4O95819 1239 aaPredicted RBP17.89■□□□□ 0.45
HMGN1-208ENST00000443046 MECOMQ03112 1051 aa17.89■□□□□ 0.45
HMGN1-208ENST00000443046 RRP1BQ14684 758 aaKnown RBP17.89■□□□□ 0.45
HMGN1-208ENST00000443046 SH3D19Q5HYK7 790 aa17.89■□□□□ 0.45
HMGN1-208ENST00000443046 SPTY2D1Q68D10 685 aaPredicted RBP17.89■□□□□ 0.45
HMGN1-208ENST00000443046 ASCC2Q9H1I8 757 aaPredicted RBP17.89■□□□□ 0.45
HMGN1-208ENST00000443046 MORF4L1Q9UBU8 362 aa17.89■□□□□ 0.45
HMGN1-208ENST00000443046 ABCF2Q9UG63 623 aa17.89■□□□□ 0.45
HMGN1-208ENST00000443046 PA2G4Q9UQ80 394 aaKnown RBP17.89■□□□□ 0.45
HMGN1-208ENST00000443046 STXBP5LQ9Y2K9 1186 aa17.89■□□□□ 0.45
HMGN1-208ENST00000443046 FAM196BA6NMK8 535 aa17.88■□□□□ 0.45
HMGN1-208ENST00000443046 MAGEA10P43363 369 aaPredicted RBP17.88■□□□□ 0.45
HMGN1-208ENST00000443046 TIMM10P62072 90 aa17.88■□□□□ 0.45
HMGN1-208ENST00000443046 PABPC4Q13310 644 aaKnown RBP eCLIP17.88■□□□□ 0.458e-10■■□□□ 13.3
HMGN1-208ENST00000443046 ALDH1L2Q3SY69 923 aa17.88■□□□□ 0.45
HMGN1-208ENST00000443046 Q7L0L9 218 aa17.88■□□□□ 0.45
HMGN1-208ENST00000443046 TRIB2Q92519 343 aa17.88■□□□□ 0.45
HMGN1-208ENST00000443046 C11orf49Q9H6J7 331 aa17.88■□□□□ 0.45
HMGN1-208ENST00000443046 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.88■□□□□ 0.45
HMGN1-208ENST00000443046 MTMR10Q9NXD2 777 aa17.88■□□□□ 0.45
HMGN1-208ENST00000443046 SPTBN5Q9NRC6 3674 aaKnown RBP17.88■□□□□ 0.45
HMGN1-208ENST00000443046 ANP32CO43423 234 aa17.87■□□□□ 0.45
HMGN1-208ENST00000443046 UBTFL1P0CB47 393 aaPredicted RBP17.87■□□□□ 0.45
HMGN1-208ENST00000443046 CAP2P40123 477 aa17.87■□□□□ 0.45
HMGN1-208ENST00000443046 HMGCS2P54868 508 aa17.87■□□□□ 0.45
HMGN1-208ENST00000443046 TDHQ8IZJ6 230 aa17.87■□□□□ 0.45
HMGN1-208ENST00000443046 FAM9BQ8IZU0 186 aa17.87■□□□□ 0.45
HMGN1-208ENST00000443046 PFASO15067 1338 aa17.87■□□□□ 0.45
HMGN1-208ENST00000443046 USP17L5A8MUK1 530 aa17.86■□□□□ 0.45
HMGN1-208ENST00000443046 COL6A1P12109 1028 aa17.86■□□□□ 0.45
HMGN1-208ENST00000443046 XRCC5P13010 732 aaKnown RBP17.86■□□□□ 0.45
HMGN1-208ENST00000443046 SYN1P17600 705 aa17.86■□□□□ 0.45
HMGN1-208ENST00000443046 ERICH6Q7L0X2 663 aa17.86■□□□□ 0.45
HMGN1-208ENST00000443046 NSUN4Q96CB9 384 aaKnown RBP17.86■□□□□ 0.45
HMGN1-208ENST00000443046 E9PSI1 815 aa17.85■□□□□ 0.45
HMGN1-208ENST00000443046 HOXA7P31268 230 aaPredicted RBP17.85■□□□□ 0.45
HMGN1-208ENST00000443046 XAGE2Q96GT9 111 aa17.85■□□□□ 0.45
HMGN1-208ENST00000443046 WDR18Q9BV38 432 aa17.85■□□□□ 0.45
HMGN1-208ENST00000443046 A0A1B0GUL7 405 aa17.84■□□□□ 0.45
HMGN1-208ENST00000443046 USP6NLQ92738 828 aa17.84■□□□□ 0.45
HMGN1-208ENST00000443046 HERC5Q9UII4 1024 aaKnown RBP17.84■□□□□ 0.45
HMGN1-208ENST00000443046 SIPA1L1O43166 1804 aa17.84■□□□□ 0.45
HMGN1-208ENST00000443046 PRKAR2AP13861 404 aaKnown RBP17.83■□□□□ 0.44
HMGN1-208ENST00000443046 SLFN5Q08AF3 891 aa17.83■□□□□ 0.44
HMGN1-208ENST00000443046 MVPQ14764 893 aaKnown RBP17.83■□□□□ 0.44
HMGN1-208ENST00000443046 P2RX7Q99572 595 aaKnown RBP17.83■□□□□ 0.44
HMGN1-208ENST00000443046 AS3MTQ9HBK9 375 aa17.83■□□□□ 0.44
HMGN1-208ENST00000443046 TXNRD2Q9NNW7 524 aa17.83■□□□□ 0.44
HMGN1-208ENST00000443046 HMG20BQ9P0W2 317 aa17.83■□□□□ 0.44
HMGN1-208ENST00000443046 HDAC5Q9UQL6 1122 aa17.83■□□□□ 0.44
HMGN1-208ENST00000443046 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.83■□□□□ 0.44
HMGN1-208ENST00000443046 LDHCP07864 332 aa17.82■□□□□ 0.44
HMGN1-208ENST00000443046 CYP2B6P20813 491 aa17.82■□□□□ 0.44
HMGN1-208ENST00000443046 BACE1P56817 501 aa17.82■□□□□ 0.44
HMGN1-208ENST00000443046 GSTO1P78417 241 aa17.82■□□□□ 0.44
HMGN1-208ENST00000443046 TFCP2Q12800 502 aa17.82■□□□□ 0.44
HMGN1-208ENST00000443046 LHX8Q68G74 356 aa17.82■□□□□ 0.44
HMGN1-208ENST00000443046 NUDT12Q9BQG2 462 aa17.82■□□□□ 0.44
HMGN1-208ENST00000443046 UBE2OQ9C0C9 1292 aaKnown RBP17.82■□□□□ 0.44
HMGN1-208ENST00000443046 AKAP2Q9Y2D5 859 aa17.82■□□□□ 0.44
HMGN1-208ENST00000443046 CDH23Q9H251 3354 aa17.82■□□□□ 0.44
HMGN1-208ENST00000443046 PEX10O60683 326 aa17.81■□□□□ 0.44
HMGN1-208ENST00000443046 HERVK_113P62684 666 aa17.81■□□□□ 0.44
HMGN1-208ENST00000443046 JAG1P78504 1218 aa17.81■□□□□ 0.44
HMGN1-208ENST00000443046 CACNB2Q08289 660 aaPredicted RBP17.81■□□□□ 0.44
HMGN1-208ENST00000443046 POTEEQ6S8J3 1075 aa17.81■□□□□ 0.44
HMGN1-208ENST00000443046 PI16Q6UXB8 463 aa17.81■□□□□ 0.44
HMGN1-208ENST00000443046 TBC1D9Q6ZT07 1266 aa17.81■□□□□ 0.44
HMGN1-208ENST00000443046 METTL16Q86W50 562 aaKnown RBP17.81■□□□□ 0.44
HMGN1-208ENST00000443046 TRMT44Q8IYL2 757 aaKnown RBP17.81■□□□□ 0.44
HMGN1-208ENST00000443046 SPATA5Q8NB90 893 aa17.81■□□□□ 0.44
HMGN1-208ENST00000443046 GPRC5AQ8NFJ5 357 aa17.81■□□□□ 0.44
HMGN1-208ENST00000443046 SOCS4Q8WXH5 440 aa17.81■□□□□ 0.44
HMGN1-208ENST00000443046 SMC4Q9NTJ3 1288 aa17.81■□□□□ 0.44
HMGN1-208ENST00000443046 RBPJLQ9UBG7 517 aa17.81■□□□□ 0.44
HMGN1-208ENST00000443046 POTEB2H3BUK9 544 aa17.8■□□□□ 0.44
HMGN1-208ENST00000443046 ARID4AP29374 1257 aaPredicted RBP17.8■□□□□ 0.44
HMGN1-208ENST00000443046 MTX1Q13505 466 aa17.8■□□□□ 0.44
HMGN1-208ENST00000443046 MTMR2Q13614 643 aa17.8■□□□□ 0.44
HMGN1-208ENST00000443046 Q3C1V9 767 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms