RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 BAZ2AQ9UIF9 1905 aaKnown RBP21.73■■□□□ 1.07
CPSF4-205ENST00000440514 SPDYE5A6NIY4 337 aa21.73■■□□□ 1.07
CPSF4-205ENST00000440514 ZFYP08048 801 aaPredicted RBP21.73■■□□□ 1.07
CPSF4-205ENST00000440514 NOL9Q5SY16 702 aaKnown RBP21.73■■□□□ 1.07
CPSF4-205ENST00000440514 EVI5LQ96CN4 794 aa21.73■■□□□ 1.07
CPSF4-205ENST00000440514 OSBPL3Q9H4L5 887 aa21.73■■□□□ 1.07
CPSF4-205ENST00000440514 DNAJC18Q9H819 358 aa21.73■■□□□ 1.07
CPSF4-205ENST00000440514 PI4KBQ9UBF8 816 aa21.73■■□□□ 1.07
CPSF4-205ENST00000440514 M0R2C6 588 aa21.72■■□□□ 1.07
CPSF4-205ENST00000440514 TBC1D12O60347 775 aa21.72■■□□□ 1.07
CPSF4-205ENST00000440514 HLA-DOAP06340 250 aa21.72■■□□□ 1.07
CPSF4-205ENST00000440514 NEFLP07196 543 aa21.72■■□□□ 1.07
CPSF4-205ENST00000440514 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.72■■□□□ 1.07
CPSF4-205ENST00000440514 EVX2Q03828 476 aa21.71■■□□□ 1.07
CPSF4-205ENST00000440514 LRRFIP1Q32MZ4 808 aaKnown RBP21.71■■□□□ 1.07
CPSF4-205ENST00000440514 ERO1BQ86YB8 467 aa21.71■■□□□ 1.07
CPSF4-205ENST00000440514 SCYL3Q8IZE3 742 aa21.71■■□□□ 1.07
CPSF4-205ENST00000440514 CRACR2BQ8N4Y2 399 aaPredicted RBP21.71■■□□□ 1.07
CPSF4-205ENST00000440514 SEC62Q99442 399 aaKnown RBP21.71■■□□□ 1.07
CPSF4-205ENST00000440514 BEGAINQ9BUH8 593 aa21.71■■□□□ 1.07
CPSF4-205ENST00000440514 DCP1AQ9NPI6 582 aaPredicted RBP21.71■■□□□ 1.07
CPSF4-205ENST00000440514 HERC5Q9UII4 1024 aaKnown RBP21.71■■□□□ 1.07
CPSF4-205ENST00000440514 TSKSQ9UJT2 592 aa21.71■■□□□ 1.07
CPSF4-205ENST00000440514 SLC4A4Q9Y6R1 1079 aa21.71■■□□□ 1.07
CPSF4-205ENST00000440514 TRIM6-TRIM34B2RNG4 842 aa21.7■■□□□ 1.06
CPSF4-205ENST00000440514 RRP1BQ14684 758 aaKnown RBP21.7■■□□□ 1.06
CPSF4-205ENST00000440514 ZMYM1Q5SVZ6 1142 aa21.7■■□□□ 1.06
CPSF4-205ENST00000440514 TRIM34Q9BYJ4 488 aa21.7■■□□□ 1.06
CPSF4-205ENST00000440514 MCM9Q9NXL9 1143 aa21.7■■□□□ 1.06
CPSF4-205ENST00000440514 PHIPQ8WWQ0 1821 aa21.69■■□□□ 1.06
CPSF4-205ENST00000440514 MANSC4A6NHS7 340 aaPredicted RBP21.69■■□□□ 1.06
CPSF4-205ENST00000440514 GPAA1O43292 621 aa21.69■■□□□ 1.06
CPSF4-205ENST00000440514 CYP2D6P10635 497 aa21.69■■□□□ 1.06
CPSF4-205ENST00000440514 SREBF2Q12772 1141 aa21.69■■□□□ 1.06
CPSF4-205ENST00000440514 METTL16Q86W50 562 aaKnown RBP21.69■■□□□ 1.06
CPSF4-205ENST00000440514 RILPL2Q969X0 211 aa21.69■■□□□ 1.06
CPSF4-205ENST00000440514 STRBPQ96SI9 672 aaKnown RBP21.69■■□□□ 1.06
CPSF4-205ENST00000440514 CTNND1O60716 968 aaKnown RBP21.68■■□□□ 1.06
CPSF4-205ENST00000440514 POLR3DP05423 398 aaPredicted RBP21.68■■□□□ 1.06
CPSF4-205ENST00000440514 PLCD1P51178 756 aa21.68■■□□□ 1.06
CPSF4-205ENST00000440514 PPIL2Q13356 520 aa21.68■■□□□ 1.06
CPSF4-205ENST00000440514 TTC6Q86TZ1 520 aa21.68■■□□□ 1.06
CPSF4-205ENST00000440514 CCDC84Q86UT8 332 aaPredicted RBP21.68■■□□□ 1.06
CPSF4-205ENST00000440514 FOXP4Q8IVH2 680 aaPredicted RBP21.68■■□□□ 1.06
CPSF4-205ENST00000440514 REM2Q8IYK8 340 aaPredicted RBP21.68■■□□□ 1.06
CPSF4-205ENST00000440514 IRF6O14896 467 aa21.67■■□□□ 1.06
CPSF4-205ENST00000440514 HSPA8P11142 646 aaKnown RBP21.67■■□□□ 1.06
CPSF4-205ENST00000440514 TM4SF4P48230 202 aa21.67■■□□□ 1.06
CPSF4-205ENST00000440514 PPATQ06203 517 aa21.67■■□□□ 1.06
CPSF4-205ENST00000440514 CENPQQ7L2Z9 268 aaPredicted RBP21.67■■□□□ 1.06
CPSF4-205ENST00000440514 MS4A4AQ96JQ5 239 aa21.67■■□□□ 1.06
CPSF4-205ENST00000440514 EHD4Q9H223 541 aa21.67■■□□□ 1.06
CPSF4-205ENST00000440514 PICK1Q9NRD5 415 aa21.67■■□□□ 1.06
CPSF4-205ENST00000440514 ATP8A2Q9NTI2 1148 aa21.67■■□□□ 1.06
CPSF4-205ENST00000440514 RNF186Q9NXI6 227 aa21.67■■□□□ 1.06
CPSF4-205ENST00000440514 SERPINB13Q9UIV8 391 aa21.67■■□□□ 1.06
CPSF4-205ENST00000440514 CYP2D7A0A087X1C5 515 aa21.66■■□□□ 1.06
CPSF4-205ENST00000440514 IGF2BP3O00425 579 aaKnown RBP eCLIP21.66■■□□□ 1.06
CPSF4-205ENST00000440514 TRPA1O75762 1119 aa21.66■■□□□ 1.06
CPSF4-205ENST00000440514 PTPRAP18433 802 aa21.66■■□□□ 1.06
CPSF4-205ENST00000440514 SHROOM1Q2M3G4 852 aaPredicted RBP21.66■■□□□ 1.06
CPSF4-205ENST00000440514 CCDC129Q6ZRS4 1044 aa21.66■■□□□ 1.06
CPSF4-205ENST00000440514 CCL15-CCL14A0A0B4J2E2 113 aa21.65■■□□□ 1.06
CPSF4-205ENST00000440514 GSG1L2A8MUP6 293 aa21.65■■□□□ 1.06
CPSF4-205ENST00000440514 SMIM22K7EJ46 135 aa21.65■■□□□ 1.06
CPSF4-205ENST00000440514 CA12O43570 354 aa21.65■■□□□ 1.06
CPSF4-205ENST00000440514 GDF11O95390 407 aa21.65■■□□□ 1.06
CPSF4-205ENST00000440514 GSPT1P15170 499 aaKnown RBP21.65■■□□□ 1.06
CPSF4-205ENST00000440514 CAP2P40123 477 aa21.65■■□□□ 1.06
CPSF4-205ENST00000440514 CTCFP49711 727 aaPredicted RBP21.65■■□□□ 1.06
CPSF4-205ENST00000440514 JAG1P78504 1218 aa21.65■■□□□ 1.06
CPSF4-205ENST00000440514 CCL15Q16663 113 aa21.65■■□□□ 1.06
CPSF4-205ENST00000440514 BRI3BPQ8WY22 251 aa21.65■■□□□ 1.06
CPSF4-205ENST00000440514 FAM227BQ96M60 508 aa21.65■■□□□ 1.06
CPSF4-205ENST00000440514 EPB41L4AQ9HCS5 686 aaPredicted RBP21.65■■□□□ 1.06
CPSF4-205ENST00000440514 A0A0D9SFI3 127 aa21.64■■□□□ 1.05
CPSF4-205ENST00000440514 GTF2A2P52657 109 aa21.64■■□□□ 1.05
CPSF4-205ENST00000440514 LBX1P52954 281 aa21.64■■□□□ 1.05
CPSF4-205ENST00000440514 NMIQ13287 307 aaPredicted RBP21.64■■□□□ 1.05
CPSF4-205ENST00000440514 TTC22Q5TAA0 569 aa21.64■■□□□ 1.05
CPSF4-205ENST00000440514 SKAP1Q86WV1 359 aa21.64■■□□□ 1.05
CPSF4-205ENST00000440514 IFNL1Q8IU54 200 aa21.64■■□□□ 1.05
CPSF4-205ENST00000440514 DDRGK1Q96HY6 314 aa21.64■■□□□ 1.05
CPSF4-205ENST00000440514 SAGE1Q9NXZ1 904 aa21.64■■□□□ 1.05
CPSF4-205ENST00000440514 ZHX2Q9Y6X8 837 aa21.64■■□□□ 1.05
CPSF4-205ENST00000440514 PTPRFP10586 1907 aa21.64■■□□□ 1.05
CPSF4-205ENST00000440514 MYH8P13535 1937 aa21.63■■□□□ 1.05
CPSF4-205ENST00000440514 TESPA1A2RU30 521 aaPredicted RBP21.63■■□□□ 1.05
CPSF4-205ENST00000440514 USP17L12C9JPN9 530 aa21.63■■□□□ 1.05
CPSF4-205ENST00000440514 USP17L21D6R901 530 aa21.63■■□□□ 1.05
CPSF4-205ENST00000440514 SHMT1P34896 483 aa21.63■■□□□ 1.05
CPSF4-205ENST00000440514 GABPAQ06546 454 aa21.63■■□□□ 1.05
CPSF4-205ENST00000440514 SNAPC2Q13487 334 aa21.63■■□□□ 1.05
CPSF4-205ENST00000440514 SLC44A5Q8NCS7 719 aa21.63■■□□□ 1.05
CPSF4-205ENST00000440514 CCDC136Q96JN2 1154 aa21.63■■□□□ 1.05
CPSF4-205ENST00000440514 PTPN18Q99952 460 aa21.63■■□□□ 1.05
CPSF4-205ENST00000440514 KCNH4Q9UQ05 1017 aa21.63■■□□□ 1.05
CPSF4-205ENST00000440514 GNAT2P19087 354 aa21.62■■□□□ 1.05
CPSF4-205ENST00000440514 INHBEP58166 350 aa21.62■■□□□ 1.05
CPSF4-205ENST00000440514 C12orf60Q5U649 245 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 1648.6 ms