RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 CLMNQ96JQ2 1002 aa17.3■□□□□ 0.36
TNFRSF1A-204ENST00000440083 CSRNP1Q96S65 589 aa17.3■□□□□ 0.36
TNFRSF1A-204ENST00000440083 NAV1Q8NEY1 1877 aa17.3■□□□□ 0.36
TNFRSF1A-204ENST00000440083 SIPA1L1O43166 1804 aa17.3■□□□□ 0.36
TNFRSF1A-204ENST00000440083 DDX60LQ5H9U9 1706 aaKnown RBP17.3■□□□□ 0.36
TNFRSF1A-204ENST00000440083 FAM196BA6NMK8 535 aa17.29■□□□□ 0.36
TNFRSF1A-204ENST00000440083 ZKSCAN1P17029 563 aaPredicted RBP17.29■□□□□ 0.36
TNFRSF1A-204ENST00000440083 USP5P45974 858 aa17.29■□□□□ 0.36
TNFRSF1A-204ENST00000440083 PTH1RQ03431 593 aa17.29■□□□□ 0.36
TNFRSF1A-204ENST00000440083 DEFB115Q30KQ5 88 aa17.29■□□□□ 0.36
TNFRSF1A-204ENST00000440083 RNF20Q5VTR2 975 aa17.29■□□□□ 0.36
TNFRSF1A-204ENST00000440083 TMED8Q6PL24 325 aaPredicted RBP17.29■□□□□ 0.36
TNFRSF1A-204ENST00000440083 ARMC9Q7Z3E5 817 aa17.29■□□□□ 0.36
TNFRSF1A-204ENST00000440083 SDR42E1Q8WUS8 393 aa17.29■□□□□ 0.36
TNFRSF1A-204ENST00000440083 KLRG1Q96E93 195 aa17.29■□□□□ 0.36
TNFRSF1A-204ENST00000440083 CAPNS2Q96L46 248 aa17.29■□□□□ 0.36
TNFRSF1A-204ENST00000440083 SEC62Q99442 399 aaKnown RBP17.29■□□□□ 0.36
TNFRSF1A-204ENST00000440083 HELLSQ9NRZ9 838 aa17.29■□□□□ 0.36
TNFRSF1A-204ENST00000440083 CHMP5Q9NZZ3 219 aa17.29■□□□□ 0.36
TNFRSF1A-204ENST00000440083 RBM8AQ9Y5S9 174 aaKnown RBP17.29■□□□□ 0.36
TNFRSF1A-204ENST00000440083 PPP1R12BO60237 982 aaPredicted RBP17.28■□□□□ 0.36
TNFRSF1A-204ENST00000440083 NPM3O75607 178 aaKnown RBP17.28■□□□□ 0.36
TNFRSF1A-204ENST00000440083 ZFYP08048 801 aaPredicted RBP17.28■□□□□ 0.36
TNFRSF1A-204ENST00000440083 EVX2Q03828 476 aa17.28■□□□□ 0.36
TNFRSF1A-204ENST00000440083 APPBP2Q92624 585 aa17.28■□□□□ 0.36
TNFRSF1A-204ENST00000440083 SNX14Q9Y5W7 946 aa17.28■□□□□ 0.36
TNFRSF1A-204ENST00000440083 MYH1P12882 1939 aa17.27■□□□□ 0.36
TNFRSF1A-204ENST00000440083 COL2A1P02458 1487 aaPredicted RBP17.27■□□□□ 0.36
TNFRSF1A-204ENST00000440083 AOC2O75106 756 aa17.27■□□□□ 0.36
TNFRSF1A-204ENST00000440083 LDLRAD1Q5T700 205 aa17.27■□□□□ 0.36
TNFRSF1A-204ENST00000440083 RGMBQ6NW40 437 aa17.27■□□□□ 0.36
TNFRSF1A-204ENST00000440083 RASAL3Q86YV0 1011 aa17.27■□□□□ 0.36
TNFRSF1A-204ENST00000440083 AIDAQ96BJ3 306 aa17.27■□□□□ 0.36
TNFRSF1A-204ENST00000440083 CRNKL1Q9BZJ0 848 aaKnown RBP17.27■□□□□ 0.36
TNFRSF1A-204ENST00000440083 CYP2D6P10635 497 aa17.26■□□□□ 0.35
TNFRSF1A-204ENST00000440083 IREB2P48200 963 aaKnown RBP17.26■□□□□ 0.35
TNFRSF1A-204ENST00000440083 ZNF157P51786 506 aaPredicted RBP17.26■□□□□ 0.35
TNFRSF1A-204ENST00000440083 MAP3K11Q16584 847 aa17.26■□□□□ 0.35
TNFRSF1A-204ENST00000440083 ZMYM1Q5SVZ6 1142 aa17.26■□□□□ 0.35
TNFRSF1A-204ENST00000440083 CCDC129Q6ZRS4 1044 aa17.26■□□□□ 0.35
TNFRSF1A-204ENST00000440083 ZNF589Q86UQ0 364 aaPredicted RBP17.26■□□□□ 0.35
TNFRSF1A-204ENST00000440083 CERS3Q8IU89 383 aa17.26■□□□□ 0.35
TNFRSF1A-204ENST00000440083 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.26■□□□□ 0.35
TNFRSF1A-204ENST00000440083 MAP4K1Q92918 833 aa17.26■□□□□ 0.35
TNFRSF1A-204ENST00000440083 WRNIP1Q96S55 665 aa17.26■□□□□ 0.35
TNFRSF1A-204ENST00000440083 STRBPQ96SI9 672 aaKnown RBP17.26■□□□□ 0.35
TNFRSF1A-204ENST00000440083 ZIC5Q96T25 663 aa17.26■□□□□ 0.35
TNFRSF1A-204ENST00000440083 CIZ1Q9ULV3 898 aaPredicted RBP17.26■□□□□ 0.35
TNFRSF1A-204ENST00000440083 U3KPZ7 1027 aaPredicted RBP17.26■□□□□ 0.35
TNFRSF1A-204ENST00000440083 BAZ2AQ9UIF9 1905 aaKnown RBP17.25■□□□□ 0.35
TNFRSF1A-204ENST00000440083 WDR33Q9C0J8 1336 aaKnown RBP17.25■□□□□ 0.35
TNFRSF1A-204ENST00000440083 FAM155AB1AL88 458 aaPredicted RBP17.25■□□□□ 0.35
TNFRSF1A-204ENST00000440083 GPAA1O43292 621 aa17.25■□□□□ 0.35
TNFRSF1A-204ENST00000440083 INPP5BP32019 993 aa17.25■□□□□ 0.35
TNFRSF1A-204ENST00000440083 MKRN3Q13064 507 aaKnown RBP17.25■□□□□ 0.35
TNFRSF1A-204ENST00000440083 VGLL4Q14135 290 aa17.25■□□□□ 0.35
TNFRSF1A-204ENST00000440083 DCAF15Q66K64 600 aa17.25■□□□□ 0.35
TNFRSF1A-204ENST00000440083 CREB3L3Q68CJ9 461 aa17.25■□□□□ 0.35
TNFRSF1A-204ENST00000440083 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.25■□□□□ 0.35
TNFRSF1A-204ENST00000440083 CNKSR2Q8WXI2 1034 aa17.25■□□□□ 0.35
TNFRSF1A-204ENST00000440083 HHIPL1Q96JK4 782 aa17.25■□□□□ 0.35
TNFRSF1A-204ENST00000440083 ZNF341Q9BYN7 854 aa17.25■□□□□ 0.35
TNFRSF1A-204ENST00000440083 ELP3Q9H9T3 547 aa17.25■□□□□ 0.35
TNFRSF1A-204ENST00000440083 SLC4A4Q9Y6R1 1079 aa17.25■□□□□ 0.35
TNFRSF1A-204ENST00000440083 THSD7BQ9C0I4 1608 aa17.25■□□□□ 0.35
TNFRSF1A-204ENST00000440083 SMIM22K7EJ46 135 aa17.24■□□□□ 0.35
TNFRSF1A-204ENST00000440083 SLC10A3P09131 477 aa17.24■□□□□ 0.35
TNFRSF1A-204ENST00000440083 MAP3K9P80192 1104 aa17.24■□□□□ 0.35
TNFRSF1A-204ENST00000440083 KCNB2Q92953 911 aa17.24■□□□□ 0.35
TNFRSF1A-204ENST00000440083 ZKSCAN4Q969J2 545 aaPredicted RBP17.24■□□□□ 0.35
TNFRSF1A-204ENST00000440083 HOOK2Q96ED9 719 aa17.24■□□□□ 0.35
TNFRSF1A-204ENST00000440083 JAKMIP1Q96N16 626 aaKnown RBP17.24■□□□□ 0.35
TNFRSF1A-204ENST00000440083 UPF3BQ9BZI7 483 aaKnown RBP17.24■□□□□ 0.35
TNFRSF1A-204ENST00000440083 DCP1AQ9NPI6 582 aaPredicted RBP17.24■□□□□ 0.35
TNFRSF1A-204ENST00000440083 FOXD4L1Q9NU39 408 aa17.24■□□□□ 0.35
TNFRSF1A-204ENST00000440083 CYP2D7A0A087X1C5 515 aa17.23■□□□□ 0.35
TNFRSF1A-204ENST00000440083 SLC27A2O14975 620 aa17.23■□□□□ 0.35
TNFRSF1A-204ENST00000440083 CASTP20810 708 aaKnown RBP17.23■□□□□ 0.35
TNFRSF1A-204ENST00000440083 PSMA5P28066 241 aa17.23■□□□□ 0.35
TNFRSF1A-204ENST00000440083 NECTIN1Q15223 517 aa17.23■□□□□ 0.35
TNFRSF1A-204ENST00000440083 TM6SF1Q9BZW5 370 aa17.23■□□□□ 0.35
TNFRSF1A-204ENST00000440083 DNAJC18Q9H819 358 aa17.23■□□□□ 0.35
TNFRSF1A-204ENST00000440083 MCM9Q9NXL9 1143 aa17.23■□□□□ 0.35
TNFRSF1A-204ENST00000440083 SNCAIPQ9Y6H5 919 aa17.23■□□□□ 0.35
TNFRSF1A-204ENST00000440083 PHF20L1A8MW92 1017 aa17.22■□□□□ 0.35
TNFRSF1A-204ENST00000440083 GJA5P36382 358 aa17.22■□□□□ 0.35
TNFRSF1A-204ENST00000440083 ECE1P42892 770 aa17.22■□□□□ 0.35
TNFRSF1A-204ENST00000440083 PLCD1P51178 756 aa17.22■□□□□ 0.35
TNFRSF1A-204ENST00000440083 KRT32Q14532 448 aa17.22■□□□□ 0.35
TNFRSF1A-204ENST00000440083 RRP1BQ14684 758 aaKnown RBP17.22■□□□□ 0.35
TNFRSF1A-204ENST00000440083 ANKRD13AQ8IZ07 590 aa17.22■□□□□ 0.35
TNFRSF1A-204ENST00000440083 RASEFQ8IZ41 740 aa17.22■□□□□ 0.35
TNFRSF1A-204ENST00000440083 SLC10A4Q96EP9 437 aa17.22■□□□□ 0.35
TNFRSF1A-204ENST00000440083 DHX36Q9H2U1 1008 aaKnown RBP17.22■□□□□ 0.35
TNFRSF1A-204ENST00000440083 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.22■□□□□ 0.352e-7■■■□□ 17.4
TNFRSF1A-204ENST00000440083 EPB41L4AQ9HCS5 686 aaPredicted RBP17.22■□□□□ 0.35
TNFRSF1A-204ENST00000440083 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.22■□□□□ 0.35
TNFRSF1A-204ENST00000440083 ZNF112Q9UJU3 913 aa17.22■□□□□ 0.35
TNFRSF1A-204ENST00000440083 LAMA4Q16363 1823 aa17.21■□□□□ 0.35
TNFRSF1A-204ENST00000440083 GSG1L2A8MUP6 293 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms