RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 SEC31BQ9NQW1 1179 aa13.63□□□□□ -0.23
NEK1-201ENST00000439128 CNPY2Q9Y2B0 182 aa13.63□□□□□ -0.23
NEK1-201ENST00000439128 SAMD9LQ8IVG5 1584 aa13.63□□□□□ -0.23
NEK1-201ENST00000439128 ANKARQ7Z5J8 1434 aa13.63□□□□□ -0.23
NEK1-201ENST00000439128 TMEM232C9JQI7 657 aa13.63□□□□□ -0.23
NEK1-201ENST00000439128 MCF2L2Q86YR7 1114 aa13.63□□□□□ -0.23
NEK1-201ENST00000439128 KBTBD3Q8NAB2 608 aa13.63□□□□□ -0.23
NEK1-201ENST00000439128 PLXNC1O60486 1568 aa13.63□□□□□ -0.23
NEK1-201ENST00000439128 GCOM1H8Y6P7 765 aaPredicted RBP13.62□□□□□ -0.23
NEK1-201ENST00000439128 POLR2MP0CAP2 368 aa13.62□□□□□ -0.23
NEK1-201ENST00000439128 SPICE1Q8N0Z3 855 aa13.62□□□□□ -0.23
NEK1-201ENST00000439128 ANGEL1Q9UNK9 670 aaKnown RBP13.62□□□□□ -0.23
NEK1-201ENST00000439128 NONOQ15233 471 aaKnown RBP eCLIP13.62□□□□□ -0.23
NEK1-201ENST00000439128 KDRP35968 1356 aa13.62□□□□□ -0.23
NEK1-201ENST00000439128 AK2P54819 239 aa13.62□□□□□ -0.23
NEK1-201ENST00000439128 Q3C1V9 767 aa13.62□□□□□ -0.23
NEK1-201ENST00000439128 LRRC24Q50LG9 513 aa13.62□□□□□ -0.23
NEK1-201ENST00000439128 MIER3Q7Z3K6 550 aa13.62□□□□□ -0.23
NEK1-201ENST00000439128 PLVAPQ9BX97 442 aa13.62□□□□□ -0.23
NEK1-201ENST00000439128 BICDL2A1A5D9 508 aa13.62□□□□□ -0.23
NEK1-201ENST00000439128 RPS6KA4O75676 772 aa13.62□□□□□ -0.23
NEK1-201ENST00000439128 CHMLP26374 656 aa13.62□□□□□ -0.23
NEK1-201ENST00000439128 CCDC50Q8IVM0 306 aa13.62□□□□□ -0.23
NEK1-201ENST00000439128 LRFN2Q9ULH4 789 aa13.62□□□□□ -0.23
NEK1-201ENST00000439128 UBE4AQ14139 1066 aa13.62□□□□□ -0.23
NEK1-201ENST00000439128 OTUD6AQ7L8S5 288 aa13.62□□□□□ -0.23
NEK1-201ENST00000439128 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.62□□□□□ -0.23
NEK1-201ENST00000439128 ZHX1Q9UKY1 873 aaPredicted RBP13.62□□□□□ -0.23
NEK1-201ENST00000439128 GRPEL1Q9HAV7 217 aa13.61□□□□□ -0.23
NEK1-201ENST00000439128 TRIM35Q9UPQ4 493 aa13.61□□□□□ -0.23
NEK1-201ENST00000439128 GDF11O95390 407 aa13.61□□□□□ -0.23
NEK1-201ENST00000439128 EPB41P11171 864 aaKnown RBP13.61□□□□□ -0.23
NEK1-201ENST00000439128 RLBP1P12271 317 aa13.61□□□□□ -0.23
NEK1-201ENST00000439128 ABI1Q8IZP0 508 aa13.61□□□□□ -0.23
NEK1-201ENST00000439128 FAM227BQ96M60 508 aa13.61□□□□□ -0.23
NEK1-201ENST00000439128 hCG_1642624A0A1W2PR95 340 aa13.61□□□□□ -0.23
NEK1-201ENST00000439128 STX10O60499 249 aa13.61□□□□□ -0.23
NEK1-201ENST00000439128 GAS7O60861 476 aa13.61□□□□□ -0.23
NEK1-201ENST00000439128 SLC27A3Q5K4L6 730 aa13.61□□□□□ -0.23
NEK1-201ENST00000439128 SLFN13Q68D06 897 aa13.61□□□□□ -0.23
NEK1-201ENST00000439128 ARID4AP29374 1257 aaPredicted RBP13.61□□□□□ -0.23
NEK1-201ENST00000439128 KRT25Q7Z3Z0 450 aa13.61□□□□□ -0.23
NEK1-201ENST00000439128 GPR101Q96P66 508 aaPredicted RBP13.61□□□□□ -0.23
NEK1-201ENST00000439128 FAM135BQ49AJ0 1406 aa13.61□□□□□ -0.23
NEK1-201ENST00000439128 STK24Q9Y6E0 443 aa13.6□□□□□ -0.23
NEK1-201ENST00000439128 PNMA6EA0A0J9YXQ4 647 aa13.6□□□□□ -0.23
NEK1-201ENST00000439128 RAPGEF1Q13905 1077 aa13.6□□□□□ -0.23
NEK1-201ENST00000439128 TPH2Q8IWU9 490 aa13.6□□□□□ -0.23
NEK1-201ENST00000439128 GRIN3BO60391 1043 aa13.6□□□□□ -0.23
NEK1-201ENST00000439128 PLCD1P51178 756 aa13.6□□□□□ -0.23
NEK1-201ENST00000439128 GRAPQ13588 217 aa13.6□□□□□ -0.23
NEK1-201ENST00000439128 IQUBQ8NA54 791 aa13.6□□□□□ -0.23
NEK1-201ENST00000439128 DEPTORQ8TB45 409 aa13.6□□□□□ -0.23
NEK1-201ENST00000439128 GRAPLQ8TC17 118 aaPredicted RBP13.6□□□□□ -0.23
NEK1-201ENST00000439128 CTAGE1Q96RT6 745 aa13.6□□□□□ -0.23
NEK1-201ENST00000439128 SUGCTQ9HAC7 445 aa13.6□□□□□ -0.23
NEK1-201ENST00000439128 ABCA8O94911 1581 aa13.6□□□□□ -0.23
NEK1-201ENST00000439128 SPATA31A6Q5VVP1 1343 aa13.6□□□□□ -0.23
NEK1-201ENST00000439128 PTPRTO14522 1441 aa13.6□□□□□ -0.23
NEK1-201ENST00000439128 ABL1P00519 1130 aa13.6□□□□□ -0.23
NEK1-201ENST00000439128 PLCB3Q01970 1234 aa13.6□□□□□ -0.23
NEK1-201ENST00000439128 HLTFQ14527 1009 aaKnown RBP eCLIP13.6□□□□□ -0.23
NEK1-201ENST00000439128 MYCT1Q8N699 235 aa13.6□□□□□ -0.23
NEK1-201ENST00000439128 ZBTB40Q9NUA8 1239 aa13.6□□□□□ -0.23
NEK1-201ENST00000439128 DNM3Q9UQ16 869 aa13.6□□□□□ -0.23
NEK1-201ENST00000439128 IKBKGQ9Y6K9 419 aa13.6□□□□□ -0.23
NEK1-201ENST00000439128 PRPF6O94906 941 aaKnown RBP13.59□□□□□ -0.23
NEK1-201ENST00000439128 FBXO11Q86XK2 927 aa13.59□□□□□ -0.23
NEK1-201ENST00000439128 SNX29Q8TEQ0 813 aa13.59□□□□□ -0.23
NEK1-201ENST00000439128 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.59□□□□□ -0.232e-6■■□□□ 11.7
NEK1-201ENST00000439128 RTL1A6NKG5 1358 aa13.59□□□□□ -0.23
NEK1-201ENST00000439128 SEMA3EO15041 775 aa13.59□□□□□ -0.23
NEK1-201ENST00000439128 KRT9P35527 623 aa13.59□□□□□ -0.23
NEK1-201ENST00000439128 STX17P56962 302 aa13.59□□□□□ -0.23
NEK1-201ENST00000439128 CALCRLQ16602 461 aa13.59□□□□□ -0.23
NEK1-201ENST00000439128 RSPH3Q86UC2 560 aa13.59□□□□□ -0.23
NEK1-201ENST00000439128 PLEKHM2Q8IWE5 1019 aa13.59□□□□□ -0.23
NEK1-201ENST00000439128 GPBP1L1Q9HC44 474 aaPredicted RBP13.59□□□□□ -0.23
NEK1-201ENST00000439128 EIF3JO75822 258 aaKnown RBP13.59□□□□□ -0.23
NEK1-201ENST00000439128 CCDC102AQ96A19 550 aa13.59□□□□□ -0.23
NEK1-201ENST00000439128 TBC1D2Q9BYX2 928 aa13.59□□□□□ -0.23
NEK1-201ENST00000439128 ZNF277Q9NRM2 450 aaPredicted RBP13.59□□□□□ -0.23
NEK1-201ENST00000439128 TRAF5O00463 557 aa13.59□□□□□ -0.23
NEK1-201ENST00000439128 SLC27A2O14975 620 aa13.59□□□□□ -0.23
NEK1-201ENST00000439128 ZBTB7BO15156 539 aaPredicted RBP13.59□□□□□ -0.23
NEK1-201ENST00000439128 USP17L8P0C7I0 530 aa13.59□□□□□ -0.23
NEK1-201ENST00000439128 CPA1P15085 419 aa13.59□□□□□ -0.23
NEK1-201ENST00000439128 UBE2HP62256 183 aa13.59□□□□□ -0.23
NEK1-201ENST00000439128 KIAA0753Q2KHM9 967 aa13.59□□□□□ -0.23
NEK1-201ENST00000439128 FAM102BQ5T8I3 360 aa13.59□□□□□ -0.23
NEK1-201ENST00000439128 GSTA5Q7RTV2 222 aa13.59□□□□□ -0.23
NEK1-201ENST00000439128 USP6P35125 1406 aa13.58□□□□□ -0.23
NEK1-201ENST00000439128 GOLGA8HP0CJ92 632 aa13.58□□□□□ -0.23
NEK1-201ENST00000439128 TERF1P54274 439 aa13.58□□□□□ -0.23
NEK1-201ENST00000439128 SPAG1Q07617 926 aa13.58□□□□□ -0.23
NEK1-201ENST00000439128 BRAPQ7Z569 592 aa13.58□□□□□ -0.23
NEK1-201ENST00000439128 JADE2Q9NQC1 790 aa13.58□□□□□ -0.23
NEK1-201ENST00000439128 BCCIPQ9P287 314 aaKnown RBP eCLIP13.58□□□□□ -0.23
NEK1-201ENST00000439128 PNMA2Q9UL42 364 aa13.58□□□□□ -0.23
NEK1-201ENST00000439128 SEPT14Q6ZU15 432 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms