RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 VGLL4Q14135 290 aa20.27■□□□□ 0.84
TARDBP-203ENST00000439080 BMP2KLQ5H9B9 411 aa20.27■□□□□ 0.84
TARDBP-203ENST00000439080 CWC27Q6UX04 472 aaKnown RBP20.27■□□□□ 0.84
TARDBP-203ENST00000439080 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.27■□□□□ 0.84
TARDBP-203ENST00000439080 ZNF589Q86UQ0 364 aaPredicted RBP20.27■□□□□ 0.84
TARDBP-203ENST00000439080 RASAL3Q86YV0 1011 aa20.27■□□□□ 0.84
TARDBP-203ENST00000439080 CRACR2BQ8N4Y2 399 aaPredicted RBP20.27■□□□□ 0.84
TARDBP-203ENST00000439080 CAPNS2Q96L46 248 aa20.27■□□□□ 0.84
TARDBP-203ENST00000439080 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.27■□□□□ 0.84
TARDBP-203ENST00000439080 EPB41L4AQ9HCS5 686 aaPredicted RBP20.27■□□□□ 0.84
TARDBP-203ENST00000439080 HERC5Q9UII4 1024 aaKnown RBP20.27■□□□□ 0.84
TARDBP-203ENST00000439080 CCDC171Q6TFL3 1326 aa20.26■□□□□ 0.83
TARDBP-203ENST00000439080 UNCXA6NJT0 531 aa20.26■□□□□ 0.83
TARDBP-203ENST00000439080 GSG1L2A8MUP6 293 aa20.26■□□□□ 0.83
TARDBP-203ENST00000439080 TBC1D12O60347 775 aa20.26■□□□□ 0.83
TARDBP-203ENST00000439080 INPP5BP32019 993 aa20.26■□□□□ 0.83
TARDBP-203ENST00000439080 ECE1P42892 770 aa20.26■□□□□ 0.83
TARDBP-203ENST00000439080 VEGFBP49765 207 aa20.26■□□□□ 0.83
TARDBP-203ENST00000439080 MAP3K9P80192 1104 aa20.26■□□□□ 0.83
TARDBP-203ENST00000439080 TTC6Q86TZ1 520 aa20.26■□□□□ 0.83
TARDBP-203ENST00000439080 TRIM34Q9BYJ4 488 aa20.26■□□□□ 0.83
TARDBP-203ENST00000439080 EHD4Q9H223 541 aa20.26■□□□□ 0.83
TARDBP-203ENST00000439080 DNAJC18Q9H819 358 aa20.26■□□□□ 0.83
TARDBP-203ENST00000439080 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.26■□□□□ 0.83
TARDBP-203ENST00000439080 ZNF112Q9UJU3 913 aa20.26■□□□□ 0.83
TARDBP-203ENST00000439080 CSADQ9Y600 493 aa20.26■□□□□ 0.83
TARDBP-203ENST00000439080 PTPRFP10586 1907 aa20.26■□□□□ 0.83
TARDBP-203ENST00000439080 PHF20L1A8MW92 1017 aa20.25■□□□□ 0.83
TARDBP-203ENST00000439080 APPP05067 770 aa20.25■□□□□ 0.83
TARDBP-203ENST00000439080 SLC10A3P09131 477 aa20.25■□□□□ 0.83
TARDBP-203ENST00000439080 CYP2D6P10635 497 aa20.25■□□□□ 0.83
TARDBP-203ENST00000439080 PLCD1P51178 756 aa20.25■□□□□ 0.83
TARDBP-203ENST00000439080 EVX2Q03828 476 aa20.25■□□□□ 0.83
TARDBP-203ENST00000439080 GIMAP6Q6P9H5 292 aa20.25■□□□□ 0.83
TARDBP-203ENST00000439080 METTL16Q86W50 562 aaKnown RBP20.25■□□□□ 0.83
TARDBP-203ENST00000439080 AMOTL1Q8IY63 956 aa20.25■□□□□ 0.83
TARDBP-203ENST00000439080 DNAJC5GQ8N7S2 189 aa20.25■□□□□ 0.83
TARDBP-203ENST00000439080 ZKSCAN4Q969J2 545 aaPredicted RBP20.25■□□□□ 0.83
TARDBP-203ENST00000439080 ELP3Q9H9T3 547 aa20.25■□□□□ 0.83
TARDBP-203ENST00000439080 ARPP21Q9UBL0 812 aaPredicted RBP20.25■□□□□ 0.83
TARDBP-203ENST00000439080 SERPINB13Q9UIV8 391 aa20.25■□□□□ 0.83
TARDBP-203ENST00000439080 SNCAIPQ9Y6H5 919 aa20.25■□□□□ 0.83
TARDBP-203ENST00000439080 WDR33Q9C0J8 1336 aaKnown RBP20.25■□□□□ 0.83
TARDBP-203ENST00000439080 FAM155AB1AL88 458 aaPredicted RBP20.24■□□□□ 0.83
TARDBP-203ENST00000439080 FOXP2O15409 715 aa20.24■□□□□ 0.83
TARDBP-203ENST00000439080 TDO2P48775 406 aa20.24■□□□□ 0.83
TARDBP-203ENST00000439080 CYP2D7A0A087X1C5 515 aa20.23■□□□□ 0.83
TARDBP-203ENST00000439080 PATL2C9JE40 543 aaKnown RBP20.23■□□□□ 0.83
TARDBP-203ENST00000439080 USP17L12C9JPN9 530 aa20.23■□□□□ 0.83
TARDBP-203ENST00000439080 USP17L21D6R901 530 aa20.23■□□□□ 0.83
TARDBP-203ENST00000439080 VPS53Q5VIR6 699 aa20.23■□□□□ 0.83
TARDBP-203ENST00000439080 CTR9Q6PD62 1173 aa20.23■□□□□ 0.83
TARDBP-203ENST00000439080 IFNL3Q8IZI9 196 aa20.23■□□□□ 0.83
TARDBP-203ENST00000439080 CCDC102AQ96A19 550 aa20.23■□□□□ 0.83
TARDBP-203ENST00000439080 NACAP1Q9BZK3 213 aa20.23■□□□□ 0.83
TARDBP-203ENST00000439080 RAD50Q92878 1312 aa20.23■□□□□ 0.83
TARDBP-203ENST00000439080 CHMLP26374 656 aa20.22■□□□□ 0.83
TARDBP-203ENST00000439080 MFAP1P55081 439 aaKnown RBP20.22■□□□□ 0.83
TARDBP-203ENST00000439080 NOL9Q5SY16 702 aaKnown RBP20.22■□□□□ 0.83
TARDBP-203ENST00000439080 C12orf60Q5U649 245 aa20.22■□□□□ 0.83
TARDBP-203ENST00000439080 FOXP4Q8IVH2 680 aaPredicted RBP20.22■□□□□ 0.83
TARDBP-203ENST00000439080 SLC10A4Q96EP9 437 aa20.22■□□□□ 0.83
TARDBP-203ENST00000439080 NAPBQ9H115 298 aa20.22■□□□□ 0.83
TARDBP-203ENST00000439080 IL25Q9H293 177 aa20.22■□□□□ 0.83
TARDBP-203ENST00000439080 ROBO3Q96MS0 1386 aa20.22■□□□□ 0.83
TARDBP-203ENST00000439080 AOC2O75106 756 aa20.21■□□□□ 0.83
TARDBP-203ENST00000439080 SCYL3Q8IZE3 742 aa20.21■□□□□ 0.83
TARDBP-203ENST00000439080 WNK4Q96J92 1243 aa20.21■□□□□ 0.83
TARDBP-203ENST00000439080 GREB1LQ9C091 1923 aaPredicted RBP20.21■□□□□ 0.83
TARDBP-203ENST00000439080 SMIM22K7EJ46 135 aa20.21■□□□□ 0.83
TARDBP-203ENST00000439080 CTNND1O60716 968 aaKnown RBP20.21■□□□□ 0.83
TARDBP-203ENST00000439080 GABPAQ06546 454 aa20.21■□□□□ 0.83
TARDBP-203ENST00000439080 MKRN3Q13064 507 aaKnown RBP20.21■□□□□ 0.83
TARDBP-203ENST00000439080 NOGQ13253 232 aa20.21■□□□□ 0.83
TARDBP-203ENST00000439080 RRP1BQ14684 758 aaKnown RBP20.21■□□□□ 0.83
TARDBP-203ENST00000439080 SBK1Q52WX2 424 aa20.21■□□□□ 0.83
TARDBP-203ENST00000439080 CNKSR2Q8WXI2 1034 aa20.21■□□□□ 0.83
TARDBP-203ENST00000439080 OPTNQ96CV9 577 aa20.21■□□□□ 0.83
TARDBP-203ENST00000439080 SPDYE5A6NIY4 337 aa20.2■□□□□ 0.82
TARDBP-203ENST00000439080 HSPD1P10809 573 aaKnown RBP20.2■□□□□ 0.82
TARDBP-203ENST00000439080 SHMT1P34896 483 aa20.2■□□□□ 0.82
TARDBP-203ENST00000439080 GJA5P36382 358 aa20.2■□□□□ 0.82
TARDBP-203ENST00000439080 SPRYD7Q5W111 196 aa20.2■□□□□ 0.82
TARDBP-203ENST00000439080 SLC44A5Q8NCS7 719 aa20.2■□□□□ 0.82
TARDBP-203ENST00000439080 RUFY2Q8WXA3 655 aa20.2■□□□□ 0.82
TARDBP-203ENST00000439080 DYNLL2Q96FJ2 89 aa20.2■□□□□ 0.82
TARDBP-203ENST00000439080 OTUD5Q96G74 571 aa20.2■□□□□ 0.82
TARDBP-203ENST00000439080 ZMYM6O95789 1325 aa20.19■□□□□ 0.82
TARDBP-203ENST00000439080 MINDY4BA8MYZ0 360 aa20.19■□□□□ 0.82
TARDBP-203ENST00000439080 GDF11O95390 407 aa20.19■□□□□ 0.82
TARDBP-203ENST00000439080 ZBTB48P10074 688 aaPredicted RBP20.19■□□□□ 0.82
TARDBP-203ENST00000439080 TATDN1Q6P1N9 297 aa20.19■□□□□ 0.82
TARDBP-203ENST00000439080 ERO1BQ86YB8 467 aa20.19■□□□□ 0.82
TARDBP-203ENST00000439080 PICK1Q9NRD5 415 aa20.19■□□□□ 0.82
TARDBP-203ENST00000439080 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.19■□□□□ 0.82
TARDBP-203ENST00000439080 SWAP70Q9UH65 585 aa20.19■□□□□ 0.82
TARDBP-203ENST00000439080 LOC285556D6RIA3 1793 aa20.18■□□□□ 0.82
TARDBP-203ENST00000439080 CAP2P40123 477 aa20.18■□□□□ 0.82
TARDBP-203ENST00000439080 SHROOM1Q2M3G4 852 aaPredicted RBP20.18■□□□□ 0.82
TARDBP-203ENST00000439080 C16orf86Q6ZW13 317 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms