RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 FDPSP14324 419 aaKnown RBP17.92■□□□□ 0.46
SGCE-205ENST00000437425 IFNAR1P17181 557 aa17.92■□□□□ 0.46
SGCE-205ENST00000437425 IARSP41252 1262 aaKnown RBP17.92■□□□□ 0.46
SGCE-205ENST00000437425 RTN1Q16799 776 aa17.92■□□□□ 0.46
SGCE-205ENST00000437425 IFIT1BQ5T764 474 aaKnown RBP17.92■□□□□ 0.46
SGCE-205ENST00000437425 CATIPQ7Z7H3 387 aa17.92■□□□□ 0.46
SGCE-205ENST00000437425 TEX11Q8IYF3 940 aa17.92■□□□□ 0.46
SGCE-205ENST00000437425 TRIM22Q8IYM9 498 aa17.92■□□□□ 0.46
SGCE-205ENST00000437425 GPT2Q8TD30 523 aa17.92■□□□□ 0.46
SGCE-205ENST00000437425 ZNF396Q96N95 335 aaPredicted RBP17.92■□□□□ 0.46
SGCE-205ENST00000437425 RBM28Q9NW13 759 aaKnown RBP17.92■□□□□ 0.46
SGCE-205ENST00000437425 BAZ2AQ9UIF9 1905 aaKnown RBP17.91■□□□□ 0.46
SGCE-205ENST00000437425 DDAH1O94760 285 aa17.91■□□□□ 0.46
SGCE-205ENST00000437425 ZNF445P59923 1031 aa17.91■□□□□ 0.46
SGCE-205ENST00000437425 HDLBPQ00341 1268 aaKnown RBP17.91■□□□□ 0.46
SGCE-205ENST00000437425 STRIP1Q5VSL9 837 aa17.91■□□□□ 0.46
SGCE-205ENST00000437425 HHIPL2Q6UWX4 724 aa17.91■□□□□ 0.46
SGCE-205ENST00000437425 BRAPQ7Z569 592 aa17.91■□□□□ 0.46
SGCE-205ENST00000437425 ZNF654Q8IZM8 581 aa17.91■□□□□ 0.46
SGCE-205ENST00000437425 FBXO18Q8NFZ0 1043 aa17.91■□□□□ 0.46
SGCE-205ENST00000437425 C7orf43Q8WVR3 580 aa17.91■□□□□ 0.46
SGCE-205ENST00000437425 VPS33BQ9H267 617 aa17.91■□□□□ 0.46
SGCE-205ENST00000437425 TAOK2Q9UL54 1235 aa17.91■□□□□ 0.46
SGCE-205ENST00000437425 FSD2A1L4K1 749 aa17.9■□□□□ 0.46
SGCE-205ENST00000437425 LETM1O95202 739 aaPredicted RBP17.9■□□□□ 0.46
SGCE-205ENST00000437425 POLR3DP05423 398 aaPredicted RBP17.9■□□□□ 0.46
SGCE-205ENST00000437425 SSRP1Q08945 709 aaKnown RBP17.9■□□□□ 0.46
SGCE-205ENST00000437425 GRIK5Q16478 980 aa17.9■□□□□ 0.46
SGCE-205ENST00000437425 FOXD4L6Q3SYB3 417 aaPredicted RBP17.9■□□□□ 0.46
SGCE-205ENST00000437425 SOGA3Q5TF21 947 aa17.9■□□□□ 0.46
SGCE-205ENST00000437425 CAVIN1Q6NZI2 390 aaKnown RBP17.9■□□□□ 0.46
SGCE-205ENST00000437425 FOXD4L3Q6VB84 417 aaPredicted RBP17.9■□□□□ 0.46
SGCE-205ENST00000437425 FERMT3Q86UX7 667 aa17.9■□□□□ 0.46
SGCE-205ENST00000437425 TGFBRAP1Q8WUH2 860 aa17.9■□□□□ 0.46
SGCE-205ENST00000437425 FIBPO43427 364 aa17.89■□□□□ 0.45
SGCE-205ENST00000437425 ADD1P35611 737 aaKnown RBP17.89■□□□□ 0.45
SGCE-205ENST00000437425 TRIM29Q14134 588 aa17.89■□□□□ 0.45
SGCE-205ENST00000437425 NTRK3Q16288 839 aa17.89■□□□□ 0.45
SGCE-205ENST00000437425 RTKN2Q8IZC4 609 aa17.89■□□□□ 0.45
SGCE-205ENST00000437425 TTLL6Q8N841 843 aa17.89■□□□□ 0.45
SGCE-205ENST00000437425 ENAHQ8N8S7 591 aaPredicted RBP17.89■□□□□ 0.45
SGCE-205ENST00000437425 FANCBQ8NB91 859 aa17.89■□□□□ 0.45
SGCE-205ENST00000437425 MKNK2Q9HBH9 465 aa17.89■□□□□ 0.45
SGCE-205ENST00000437425 TCP11L1Q9NUJ3 509 aa17.89■□□□□ 0.45
SGCE-205ENST00000437425 NAV1Q8NEY1 1877 aa17.89■□□□□ 0.45
SGCE-205ENST00000437425 DLEC1Q9Y238 1755 aa17.88■□□□□ 0.45
SGCE-205ENST00000437425 CYP2D7A0A087X1C5 515 aa17.88■□□□□ 0.45
SGCE-205ENST00000437425 TSPY2A6NKD2 308 aa17.88■□□□□ 0.45
SGCE-205ENST00000437425 FMNL1O95466 1100 aaPredicted RBP17.88■□□□□ 0.45
SGCE-205ENST00000437425 CHRNA5P30532 468 aa17.88■□□□□ 0.45
SGCE-205ENST00000437425 RHBDL3P58872 404 aa17.88■□□□□ 0.45
SGCE-205ENST00000437425 DGKHQ86XP1 1220 aa17.88■□□□□ 0.45
SGCE-205ENST00000437425 NKX2-3Q8TAU0 364 aa17.88■□□□□ 0.45
SGCE-205ENST00000437425 ANKS1AQ92625 1134 aa17.88■□□□□ 0.45
SGCE-205ENST00000437425 TEKT1Q969V4 418 aa17.88■□□□□ 0.45
SGCE-205ENST00000437425 SPATA32Q96LK8 384 aa17.88■□□□□ 0.45
SGCE-205ENST00000437425 MAP3K14Q99558 947 aa17.88■□□□□ 0.45
SGCE-205ENST00000437425 TTF2Q9UNY4 1162 aaKnown RBP17.88■□□□□ 0.45
SGCE-205ENST00000437425 DAGLAQ9Y4D2 1042 aa17.88■□□□□ 0.45
SGCE-205ENST00000437425 USP17L8P0C7I0 530 aa17.88■□□□□ 0.45
SGCE-205ENST00000437425 CDC27P30260 824 aa17.88■□□□□ 0.45
SGCE-205ENST00000437425 MRE11P49959 708 aa17.88■□□□□ 0.45
SGCE-205ENST00000437425 KIAA2012Q0VF49 1180 aa17.88■□□□□ 0.45
SGCE-205ENST00000437425 DOK7Q18PE1 504 aa17.88■□□□□ 0.45
SGCE-205ENST00000437425 CCDC93Q567U6 631 aa17.88■□□□□ 0.45
SGCE-205ENST00000437425 ZNF444Q8N0Y2 327 aaPredicted RBP17.88■□□□□ 0.45
SGCE-205ENST00000437425 FBXW7Q969H0 707 aa17.88■□□□□ 0.45
SGCE-205ENST00000437425 ZKSCAN3Q9BRR0 538 aa17.88■□□□□ 0.45
SGCE-205ENST00000437425 ALG1Q9BT22 464 aa17.88■□□□□ 0.45
SGCE-205ENST00000437425 SENP2Q9HC62 589 aa17.88■□□□□ 0.45
SGCE-205ENST00000437425 GDPD2Q9HCC8 539 aa17.88■□□□□ 0.45
SGCE-205ENST00000437425 FAM217BQ9NTX9 383 aaPredicted RBP17.88■□□□□ 0.45
SGCE-205ENST00000437425 SLX4Q8IY92 1834 aa17.87■□□□□ 0.45
SGCE-205ENST00000437425 FLT1P17948 1338 aa17.87■□□□□ 0.45
SGCE-205ENST00000437425 GOLGA6L4A6NEF3 574 aa17.87■□□□□ 0.45
SGCE-205ENST00000437425 DEXIO95424 95 aa17.87■□□□□ 0.45
SGCE-205ENST00000437425 ZSCAN23Q3MJ62 389 aa17.87■□□□□ 0.45
SGCE-205ENST00000437425 TTC6Q86TZ1 520 aa17.87■□□□□ 0.45
SGCE-205ENST00000437425 STK11IPQ8N1F8 1099 aa17.87■□□□□ 0.45
SGCE-205ENST00000437425 CHAMP1Q96JM3 812 aa17.87■□□□□ 0.45
SGCE-205ENST00000437425 RNF26Q9BY78 433 aaPredicted RBP17.87■□□□□ 0.45
SGCE-205ENST00000437425 TCHHQ07283 1943 aa17.86■□□□□ 0.45
SGCE-205ENST00000437425 SNED1Q8TER0 1413 aa17.86■□□□□ 0.45
SGCE-205ENST00000437425 USP17L3A6NCW0 530 aa17.86■□□□□ 0.45
SGCE-205ENST00000437425 USP17L4A6NCW7 530 aa17.86■□□□□ 0.45
SGCE-205ENST00000437425 XBP1P17861 261 aa17.86■□□□□ 0.45
SGCE-205ENST00000437425 AKAP17AQ02040 695 aaKnown RBP17.86■□□□□ 0.45
SGCE-205ENST00000437425 OLFM4Q6UX06 510 aa17.86■□□□□ 0.45
SGCE-205ENST00000437425 C16orf86Q6ZW13 317 aa17.86■□□□□ 0.45
SGCE-205ENST00000437425 USP17L1Q7RTZ2 530 aa17.86■□□□□ 0.45
SGCE-205ENST00000437425 MAPKAPK5Q8IW41 473 aa17.86■□□□□ 0.45
SGCE-205ENST00000437425 PSMD1Q99460 953 aa17.86■□□□□ 0.45
SGCE-205ENST00000437425 RBM27Q9P2N5 1060 aaKnown RBP17.86■□□□□ 0.45
SGCE-205ENST00000437425 ECE2O60344 883 aa17.85■□□□□ 0.45
SGCE-205ENST00000437425 PRDM1O75626 825 aa17.85■□□□□ 0.45
SGCE-205ENST00000437425 CYP2D6P10635 497 aa17.85■□□□□ 0.45
SGCE-205ENST00000437425 KIF5BP33176 963 aa17.85■□□□□ 0.45
SGCE-205ENST00000437425 TGFB2P61812 414 aa17.85■□□□□ 0.45
SGCE-205ENST00000437425 CCDC183Q5T5S1 534 aa17.85■□□□□ 0.45
SGCE-205ENST00000437425 CRACR2BQ8N4Y2 399 aaPredicted RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms