RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 ADAM30Q9UKF2 790 aa6.65□□□□□ -1.34
HMGB1P45-201ENST00000435986 PRR36Q9H6K5 1346 aa6.65□□□□□ -1.35
HMGB1P45-201ENST00000435986 PRAMEF27A3QJZ7 478 aa6.64□□□□□ -1.35
HMGB1P45-201ENST00000435986 GFRA2O00451 464 aa6.64□□□□□ -1.35
HMGB1P45-201ENST00000435986 FANCGO15287 622 aa6.64□□□□□ -1.35
HMGB1P45-201ENST00000435986 AOC2O75106 756 aa6.64□□□□□ -1.35
HMGB1P45-201ENST00000435986 PGRP06401 933 aa6.64□□□□□ -1.35
HMGB1P45-201ENST00000435986 SPATA31C1P0DKV0 1188 aa6.64□□□□□ -1.35
HMGB1P45-201ENST00000435986 YARSP54577 528 aaKnown RBP6.64□□□□□ -1.35
HMGB1P45-201ENST00000435986 ERVK-24P63145 666 aa6.64□□□□□ -1.35
HMGB1P45-201ENST00000435986 SERINC3Q13530 473 aa6.64□□□□□ -1.35
HMGB1P45-201ENST00000435986 LARP1BQ659C4 914 aaKnown RBP6.64□□□□□ -1.35
HMGB1P45-201ENST00000435986 LRFN4Q6PJG9 635 aa6.64□□□□□ -1.35
HMGB1P45-201ENST00000435986 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.64□□□□□ -1.35
HMGB1P45-201ENST00000435986 LSRQ86X29 649 aaPredicted RBP6.64□□□□□ -1.35
HMGB1P45-201ENST00000435986 ZNF507Q8TCN5 953 aa6.64□□□□□ -1.35
HMGB1P45-201ENST00000435986 TMEM40Q8WWA1 233 aa6.64□□□□□ -1.35
HMGB1P45-201ENST00000435986 NRSN2Q9GZP1 204 aa6.64□□□□□ -1.35
HMGB1P45-201ENST00000435986 CCDC113Q9H0I3 377 aa6.64□□□□□ -1.35
HMGB1P45-201ENST00000435986 MRPL18Q9H0U6 180 aaKnown RBP6.64□□□□□ -1.35
HMGB1P45-201ENST00000435986 MEIS3P2A8K0S8 358 aa6.63□□□□□ -1.35
HMGB1P45-201ENST00000435986 DCDC2CA8MYV0 355 aa6.63□□□□□ -1.35
HMGB1P45-201ENST00000435986 MSTNO14793 375 aa6.63□□□□□ -1.35
HMGB1P45-201ENST00000435986 ZNF862O60290 1169 aa6.63□□□□□ -1.35
HMGB1P45-201ENST00000435986 HSP90B1P14625 803 aaKnown RBP6.63□□□□□ -1.35
HMGB1P45-201ENST00000435986 GUCY2CP25092 1073 aa6.63□□□□□ -1.35
HMGB1P45-201ENST00000435986 CHRNA4P43681 627 aa6.63□□□□□ -1.35
HMGB1P45-201ENST00000435986 ZC3H12AQ5D1E8 599 aaKnown RBP6.63□□□□□ -1.35
HMGB1P45-201ENST00000435986 TAF7LQ5H9L4 462 aa6.63□□□□□ -1.35
HMGB1P45-201ENST00000435986 INTS3Q68E01 1043 aaKnown RBP6.63□□□□□ -1.35
HMGB1P45-201ENST00000435986 ZNF746Q6NUN9 644 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P45-201ENST00000435986 MPRIPQ6WCQ1 1025 aa6.63□□□□□ -1.35
HMGB1P45-201ENST00000435986 CYFIP1Q7L576 1253 aa6.63□□□□□ -1.35
HMGB1P45-201ENST00000435986 CD163Q86VB7 1156 aa6.63□□□□□ -1.35
HMGB1P45-201ENST00000435986 TAB3Q8N5C8 712 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P45-201ENST00000435986 GALNT11Q8NCW6 608 aa6.63□□□□□ -1.35
HMGB1P45-201ENST00000435986 DEPDC7Q96QD5 511 aa6.63□□□□□ -1.35
HMGB1P45-201ENST00000435986 REV1Q9UBZ9 1251 aa6.63□□□□□ -1.35
HMGB1P45-201ENST00000435986 POLR3KQ9Y2Y1 108 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P45-201ENST00000435986 A0A0A0MRY4 1105 aa6.62□□□□□ -1.35
HMGB1P45-201ENST00000435986 MEGF11A6BM72 1044 aa6.62□□□□□ -1.35
HMGB1P45-201ENST00000435986 C1QTNF9BB2RNN3 333 aa6.62□□□□□ -1.35
HMGB1P45-201ENST00000435986 FAM229AH3BQW9 127 aa6.62□□□□□ -1.35
HMGB1P45-201ENST00000435986 INPP5AQ14642 412 aa6.62□□□□□ -1.35
HMGB1P45-201ENST00000435986 DDR2Q16832 855 aa6.62□□□□□ -1.35
HMGB1P45-201ENST00000435986 AKAP4Q5JQC9 854 aa6.62□□□□□ -1.35
HMGB1P45-201ENST00000435986 TMEM201Q5SNT2 666 aa6.62□□□□□ -1.35
HMGB1P45-201ENST00000435986 SDE2Q6IQ49 451 aa6.62□□□□□ -1.35
HMGB1P45-201ENST00000435986 FDX2Q6P4F2 183 aa6.62□□□□□ -1.35
HMGB1P45-201ENST00000435986 IGF2-ASQ6U949 168 aa6.62□□□□□ -1.35
HMGB1P45-201ENST00000435986 C12orf40Q86WS4 652 aa6.62□□□□□ -1.35
HMGB1P45-201ENST00000435986 FMR1NBQ8N0W7 255 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P45-201ENST00000435986 PUS7Q96PZ0 661 aaKnown RBP6.62□□□□□ -1.35
HMGB1P45-201ENST00000435986 WDR18Q9BV38 432 aa6.62□□□□□ -1.35
HMGB1P45-201ENST00000435986 WNT10AQ9GZT5 417 aa6.62□□□□□ -1.35
HMGB1P45-201ENST00000435986 PIDD1Q9HB75 910 aa6.62□□□□□ -1.35
HMGB1P45-201ENST00000435986 SSU72Q9NP77 194 aaKnown RBP6.62□□□□□ -1.35
HMGB1P45-201ENST00000435986 CCDC85CA6NKD9 419 aa6.61□□□□□ -1.35
HMGB1P45-201ENST00000435986 DDAH1O94760 285 aa6.61□□□□□ -1.35
HMGB1P45-201ENST00000435986 ECEL1O95672 775 aa6.61□□□□□ -1.35
HMGB1P45-201ENST00000435986 NAT2P11245 290 aa6.61□□□□□ -1.35
HMGB1P45-201ENST00000435986 ELNP15502 786 aa6.61□□□□□ -1.35
HMGB1P45-201ENST00000435986 RAG1P15918 1043 aa6.61□□□□□ -1.35
HMGB1P45-201ENST00000435986 GRK4P32298 578 aa6.61□□□□□ -1.35
HMGB1P45-201ENST00000435986 CCNFP41002 786 aa6.61□□□□□ -1.35
HMGB1P45-201ENST00000435986 NCAPHQ15003 741 aa6.61□□□□□ -1.35
HMGB1P45-201ENST00000435986 FOXD4L6Q3SYB3 417 aaPredicted RBP6.61□□□□□ -1.35
HMGB1P45-201ENST00000435986 BBS9Q3SYG4 887 aa6.61□□□□□ -1.35
HMGB1P45-201ENST00000435986 FOXD4L3Q6VB84 417 aaPredicted RBP6.61□□□□□ -1.35
HMGB1P45-201ENST00000435986 ACAD11Q709F0 780 aa6.61□□□□□ -1.35
HMGB1P45-201ENST00000435986 NLRC3Q7RTR2 1065 aa6.61□□□□□ -1.35
HMGB1P45-201ENST00000435986 HID1Q8IV36 788 aa6.61□□□□□ -1.35
HMGB1P45-201ENST00000435986 DHRS1Q96LJ7 313 aa6.61□□□□□ -1.35
HMGB1P45-201ENST00000435986 PIF1Q9H611 641 aa6.61□□□□□ -1.35
HMGB1P45-201ENST00000435986 PHAXQ9H814 394 aaKnown RBP6.61□□□□□ -1.35
HMGB1P45-201ENST00000435986 KLHL3Q9UH77 587 aa6.61□□□□□ -1.35
HMGB1P45-201ENST00000435986 AP4E1Q9UPM8 1137 aa6.61□□□□□ -1.35
HMGB1P45-201ENST00000435986 MAPK8IP1Q9UQF2 711 aa6.61□□□□□ -1.35
HMGB1P45-201ENST00000435986 DLL1O00548 723 aa6.6□□□□□ -1.35
HMGB1P45-201ENST00000435986 DDX3YO15523 660 aaKnown RBP6.6□□□□□ -1.35
HMGB1P45-201ENST00000435986 PDPK1O15530 556 aa6.6□□□□□ -1.35
HMGB1P45-201ENST00000435986 DEAF1O75398 565 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P45-201ENST00000435986 SLC6A19Q695T7 634 aa6.6□□□□□ -1.35
HMGB1P45-201ENST00000435986 ANKRD34AQ69YU3 496 aa6.6□□□□□ -1.35
HMGB1P45-201ENST00000435986 FAM169BQ8N8A8 192 aa6.6□□□□□ -1.35
HMGB1P45-201ENST00000435986 SMG8Q8ND04 991 aaKnown RBP6.6□□□□□ -1.35
HMGB1P45-201ENST00000435986 RNF214Q8ND24 703 aa6.6□□□□□ -1.35
HMGB1P45-201ENST00000435986 FAM13CQ8NE31 585 aa6.6□□□□□ -1.35
HMGB1P45-201ENST00000435986 YIPF2Q9BWQ6 316 aa6.6□□□□□ -1.35
HMGB1P45-201ENST00000435986 SUGCTQ9HAC7 445 aa6.6□□□□□ -1.35
HMGB1P45-201ENST00000435986 CWC22Q9HCG8 908 aaKnown RBP6.6□□□□□ -1.35
HMGB1P45-201ENST00000435986 ST7Q9NRC1 585 aa6.6□□□□□ -1.35
HMGB1P45-201ENST00000435986 SNTG2Q9NY99 539 aa6.6□□□□□ -1.35
HMGB1P45-201ENST00000435986 HIF3AQ9Y2N7 669 aa6.6□□□□□ -1.35
HMGB1P45-201ENST00000435986 CSADQ9Y600 493 aa6.6□□□□□ -1.35
HMGB1P45-201ENST00000435986 SLC22A31A6NKX4 558 aa6.59□□□□□ -1.35
HMGB1P45-201ENST00000435986 SART1O43290 800 aaKnown RBP6.59□□□□□ -1.35
HMGB1P45-201ENST00000435986 ADAM11O75078 769 aa6.59□□□□□ -1.35
HMGB1P45-201ENST00000435986 NME1P15531 152 aaKnown RBP6.59□□□□□ -1.35
HMGB1P45-201ENST00000435986 HSD3B2P26439 372 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms