RNA–Protein interactions for RNA: ENST00000433680.1

TNFAIP3-204, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-204ENST00000433680 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.62■□□□□ 0.41
TNFAIP3-204ENST00000433680 CCDC102AQ96A19 550 aa17.62■□□□□ 0.41
TNFAIP3-204ENST00000433680 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.62■□□□□ 0.41
TNFAIP3-204ENST00000433680 ARPP21Q9UBL0 812 aaPredicted RBP17.62■□□□□ 0.41
TNFAIP3-204ENST00000433680 SIPA1L1O43166 1804 aa17.62■□□□□ 0.41
TNFAIP3-204ENST00000433680 BAZ2AQ9UIF9 1905 aaKnown RBP17.61■□□□□ 0.41
TNFAIP3-204ENST00000433680 OTOFQ9HC10 1997 aa17.61■□□□□ 0.41
TNFAIP3-204ENST00000433680 APPP05067 770 aa17.61■□□□□ 0.41
TNFAIP3-204ENST00000433680 CHMLP26374 656 aa17.61■□□□□ 0.41
TNFAIP3-204ENST00000433680 HTRA3P83110 453 aa17.61■□□□□ 0.41
TNFAIP3-204ENST00000433680 SBK1Q52WX2 424 aa17.61■□□□□ 0.41
TNFAIP3-204ENST00000433680 CRACR2BQ8N4Y2 399 aaPredicted RBP17.61■□□□□ 0.41
TNFAIP3-204ENST00000433680 WRNIP1Q96S55 665 aa17.61■□□□□ 0.41
TNFAIP3-204ENST00000433680 SERPINB13Q9UIV8 391 aa17.61■□□□□ 0.41
TNFAIP3-204ENST00000433680 FZD1Q9UP38 647 aa17.61■□□□□ 0.41
TNFAIP3-204ENST00000433680 CSADQ9Y600 493 aa17.61■□□□□ 0.41
TNFAIP3-204ENST00000433680 CCDC171Q6TFL3 1326 aa17.61■□□□□ 0.41
TNFAIP3-204ENST00000433680 RAD50Q92878 1312 aa17.61■□□□□ 0.41
TNFAIP3-204ENST00000433680 TDO2P48775 406 aa17.6■□□□□ 0.41
TNFAIP3-204ENST00000433680 ZNF157P51786 506 aaPredicted RBP17.6■□□□□ 0.41
TNFAIP3-204ENST00000433680 C12orf60Q5U649 245 aa17.6■□□□□ 0.41
TNFAIP3-204ENST00000433680 CCDC129Q6ZRS4 1044 aa17.6■□□□□ 0.41
TNFAIP3-204ENST00000433680 IFNL3Q8IZI9 196 aa17.6■□□□□ 0.41
TNFAIP3-204ENST00000433680 SLC10A4Q96EP9 437 aa17.6■□□□□ 0.41
TNFAIP3-204ENST00000433680 LAMB1P07942 1786 aa17.59■□□□□ 0.41
TNFAIP3-204ENST00000433680 PHF20L1A8MW92 1017 aa17.59■□□□□ 0.41
TNFAIP3-204ENST00000433680 USP17L12C9JPN9 530 aa17.59■□□□□ 0.41
TNFAIP3-204ENST00000433680 USP17L21D6R901 530 aa17.59■□□□□ 0.41
TNFAIP3-204ENST00000433680 CTNND1O60716 968 aaKnown RBP17.59■□□□□ 0.41
TNFAIP3-204ENST00000433680 PLCD1P51178 756 aa17.59■□□□□ 0.41
TNFAIP3-204ENST00000433680 ALX1Q15699 326 aa17.59■□□□□ 0.41
TNFAIP3-204ENST00000433680 NOL9Q5SY16 702 aaKnown RBP17.59■□□□□ 0.41
TNFAIP3-204ENST00000433680 CTR9Q6PD62 1173 aa17.59■□□□□ 0.41
TNFAIP3-204ENST00000433680 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.59■□□□□ 0.41
TNFAIP3-204ENST00000433680 NAPBQ9H115 298 aa17.59■□□□□ 0.41
TNFAIP3-204ENST00000433680 SWAP70Q9UH65 585 aa17.59■□□□□ 0.41
TNFAIP3-204ENST00000433680 ZMYM6O95789 1325 aa17.58■□□□□ 0.4
TNFAIP3-204ENST00000433680 VGLL4Q14135 290 aa17.58■□□□□ 0.4
TNFAIP3-204ENST00000433680 CASC1Q6TDU7 716 aa17.58■□□□□ 0.4
TNFAIP3-204ENST00000433680 PAXIP1Q6ZW49 1069 aaPredicted RBP17.58■□□□□ 0.4
TNFAIP3-204ENST00000433680 ZNF589Q86UQ0 364 aaPredicted RBP17.58■□□□□ 0.4
TNFAIP3-204ENST00000433680 CAPNS2Q96L46 248 aa17.58■□□□□ 0.4
TNFAIP3-204ENST00000433680 EPB41L4AQ9HCS5 686 aaPredicted RBP17.58■□□□□ 0.4
TNFAIP3-204ENST00000433680 DOCK1Q14185 1865 aa17.57■□□□□ 0.4
TNFAIP3-204ENST00000433680 SLC10A3P09131 477 aa17.57■□□□□ 0.4
TNFAIP3-204ENST00000433680 HSPD1P10809 573 aaKnown RBP17.57■□□□□ 0.4
TNFAIP3-204ENST00000433680 GABPAQ06546 454 aa17.57■□□□□ 0.4
TNFAIP3-204ENST00000433680 SLC4A8Q2Y0W8 1093 aa17.57■□□□□ 0.4
TNFAIP3-204ENST00000433680 CYP4F22Q6NT55 531 aa17.57■□□□□ 0.4
TNFAIP3-204ENST00000433680 TATDN1Q6P1N9 297 aa17.57■□□□□ 0.4
TNFAIP3-204ENST00000433680 DNAJC5GQ8N7S2 189 aa17.57■□□□□ 0.4
TNFAIP3-204ENST00000433680 ZKSCAN4Q969J2 545 aaPredicted RBP17.57■□□□□ 0.4
TNFAIP3-204ENST00000433680 GINM1Q9NU53 330 aa17.57■□□□□ 0.4
TNFAIP3-204ENST00000433680 ROBO3Q96MS0 1386 aa17.56■□□□□ 0.4
TNFAIP3-204ENST00000433680 WDR33Q9C0J8 1336 aaKnown RBP17.56■□□□□ 0.4
TNFAIP3-204ENST00000433680 FOXP2O15409 715 aa17.56■□□□□ 0.4
TNFAIP3-204ENST00000433680 ZBTB48P10074 688 aaPredicted RBP17.56■□□□□ 0.4
TNFAIP3-204ENST00000433680 INPP5BP32019 993 aa17.56■□□□□ 0.4
TNFAIP3-204ENST00000433680 CAP2P40123 477 aa17.56■□□□□ 0.4
TNFAIP3-204ENST00000433680 VEGFBP49765 207 aa17.56■□□□□ 0.4
TNFAIP3-204ENST00000433680 NOGQ13253 232 aa17.56■□□□□ 0.4
TNFAIP3-204ENST00000433680 VPS53Q5VIR6 699 aa17.56■□□□□ 0.4
TNFAIP3-204ENST00000433680 RASAL3Q86YV0 1011 aa17.56■□□□□ 0.4
TNFAIP3-204ENST00000433680 SCYL3Q8IZE3 742 aa17.56■□□□□ 0.4
TNFAIP3-204ENST00000433680 CLMNQ96JQ2 1002 aa17.56■□□□□ 0.4
TNFAIP3-204ENST00000433680 DSCC1Q9BVC3 393 aa17.56■□□□□ 0.4
TNFAIP3-204ENST00000433680 DNAJC18Q9H819 358 aa17.56■□□□□ 0.4
TNFAIP3-204ENST00000433680 PICK1Q9NRD5 415 aa17.56■□□□□ 0.4
TNFAIP3-204ENST00000433680 SNCAIPQ9Y6H5 919 aa17.56■□□□□ 0.4
TNFAIP3-204ENST00000433680 SPDYE5A6NIY4 337 aa17.55■□□□□ 0.4
TNFAIP3-204ENST00000433680 FAM196BA6NMK8 535 aa17.55■□□□□ 0.4
TNFAIP3-204ENST00000433680 MINDY4BA8MYZ0 360 aa17.55■□□□□ 0.4
TNFAIP3-204ENST00000433680 FAM155AB1AL88 458 aaPredicted RBP17.55■□□□□ 0.4
TNFAIP3-204ENST00000433680 SGSM2O43147 1006 aa17.55■□□□□ 0.4
TNFAIP3-204ENST00000433680 CDC45O75419 566 aa17.55■□□□□ 0.4
TNFAIP3-204ENST00000433680 SLC3A2P08195 630 aaKnown RBP17.55■□□□□ 0.4
TNFAIP3-204ENST00000433680 CYP2D6P10635 497 aa17.55■□□□□ 0.4
TNFAIP3-204ENST00000433680 MAP2K2P36507 400 aa17.55■□□□□ 0.4
TNFAIP3-204ENST00000433680 C16orf86Q6ZW13 317 aa17.55■□□□□ 0.4
TNFAIP3-204ENST00000433680 ERO1BQ86YB8 467 aa17.55■□□□□ 0.4
TNFAIP3-204ENST00000433680 REM2Q8IYK8 340 aaPredicted RBP17.55■□□□□ 0.4
TNFAIP3-204ENST00000433680 ELP3Q9H9T3 547 aa17.55■□□□□ 0.4
TNFAIP3-204ENST00000433680 ZNF287Q9HBT7 754 aa17.55■□□□□ 0.4
TNFAIP3-204ENST00000433680 ATAD5Q96QE3 1844 aa17.55■□□□□ 0.4
TNFAIP3-204ENST00000433680 MYH8P13535 1937 aa17.55■□□□□ 0.4
TNFAIP3-204ENST00000433680 THSD7BQ9C0I4 1608 aa17.54■□□□□ 0.4
TNFAIP3-204ENST00000433680 CYP2D7A0A087X1C5 515 aa17.54■□□□□ 0.4
TNFAIP3-204ENST00000433680 FGAP02671 866 aa17.54■□□□□ 0.4
TNFAIP3-204ENST00000433680 SLURP2P0DP57 97 aa17.54■□□□□ 0.4
TNFAIP3-204ENST00000433680 PPATQ06203 517 aa17.54■□□□□ 0.4
TNFAIP3-204ENST00000433680 SPRYD7Q5W111 196 aa17.54■□□□□ 0.4
TNFAIP3-204ENST00000433680 OPTNQ96CV9 577 aa17.54■□□□□ 0.4
TNFAIP3-204ENST00000433680 TBC1D2Q9BYX2 928 aa17.54■□□□□ 0.4
TNFAIP3-204ENST00000433680 ASNSP08243 561 aa17.53■□□□□ 0.4
TNFAIP3-204ENST00000433680 SHMT1P34896 483 aa17.53■□□□□ 0.4
TNFAIP3-204ENST00000433680 PPARAQ07869 468 aa17.53■□□□□ 0.4
TNFAIP3-204ENST00000433680 GRM1Q13255 1194 aa17.53■□□□□ 0.4
TNFAIP3-204ENST00000433680 CERKLQ49MI3 558 aaPredicted RBP17.53■□□□□ 0.4
TNFAIP3-204ENST00000433680 WNK4Q96J92 1243 aa17.53■□□□□ 0.4
TNFAIP3-204ENST00000433680 CTNNA3Q9UI47 895 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms