RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 LRFN4Q6PJG9 635 aa5.98□□□□□ -1.45
CLK1-204ENST00000432425 AGMOQ6ZNB7 445 aa5.98□□□□□ -1.45
CLK1-204ENST00000432425 ARHGAP27Q6ZUM4 889 aa5.98□□□□□ -1.45
CLK1-204ENST00000432425 PLPPR2Q96GM1 343 aa5.98□□□□□ -1.45
CLK1-204ENST00000432425 NOC4LQ9BVI4 516 aaKnown RBP5.98□□□□□ -1.45
CLK1-204ENST00000432425 SNCAIPQ9Y6H5 919 aa5.98□□□□□ -1.45
CLK1-204ENST00000432425 GP2P55259 537 aaKnown RBP5.97□□□□□ -1.45
CLK1-204ENST00000432425 RING1Q06587 406 aa5.97□□□□□ -1.45
CLK1-204ENST00000432425 INPP5AQ14642 412 aa5.97□□□□□ -1.45
CLK1-204ENST00000432425 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.97□□□□□ -1.45
CLK1-204ENST00000432425 VSIG10LQ86VR7 867 aa5.97□□□□□ -1.45
CLK1-204ENST00000432425 TOP6BLQ8N6T0 577 aa5.97□□□□□ -1.45
CLK1-204ENST00000432425 ZNF507Q8TCN5 953 aa5.97□□□□□ -1.45
CLK1-204ENST00000432425 GIPC2Q8TF65 315 aa5.97□□□□□ -1.45
CLK1-204ENST00000432425 DUSP23Q9BVJ7 150 aa5.97□□□□□ -1.45
CLK1-204ENST00000432425 MIR1-1HGQ9H1L0 117 aa5.97□□□□□ -1.45
CLK1-204ENST00000432425 BSDC1Q9NW68 430 aaPredicted RBP5.97□□□□□ -1.45
CLK1-204ENST00000432425 ZC3H7BQ9UGR2 993 aaKnown RBP5.97□□□□□ -1.45
CLK1-204ENST00000432425 PCDHB5Q9Y5E4 795 aa5.97□□□□□ -1.45
CLK1-204ENST00000432425 USP31Q70CQ4 1352 aa5.96□□□□□ -1.45
CLK1-204ENST00000432425 LEFTY1O75610 366 aa5.96□□□□□ -1.46
CLK1-204ENST00000432425 NTF4P34130 210 aa5.96□□□□□ -1.46
CLK1-204ENST00000432425 ETF1P62495 437 aaKnown RBP5.95□□□□□ -1.46
CLK1-204ENST00000432425 LCE1DQ5T752 114 aa5.95□□□□□ -1.46
CLK1-204ENST00000432425 CYFIP1Q7L576 1253 aa5.95□□□□□ -1.46
CLK1-204ENST00000432425 UBE3DQ7Z6J8 389 aa5.95□□□□□ -1.46
CLK1-204ENST00000432425 KRTAP9-8Q9BYQ0 159 aa5.95□□□□□ -1.46
CLK1-204ENST00000432425 CCDC39Q9UFE4 941 aa5.95□□□□□ -1.46
CLK1-204ENST00000432425 ADAMTS4O75173 837 aa5.94□□□□□ -1.46
CLK1-204ENST00000432425 PRNPP04156 253 aa5.94□□□□□ -1.46
CLK1-204ENST00000432425 TFE3P19532 575 aaPredicted RBP5.94□□□□□ -1.46
CLK1-204ENST00000432425 WNT10AQ9GZT5 417 aa5.94□□□□□ -1.46
CLK1-204ENST00000432425 PRDM10Q9NQV6 1147 aa5.94□□□□□ -1.46
CLK1-204ENST00000432425 TLR6Q9Y2C9 796 aa5.94□□□□□ -1.46
CLK1-204ENST00000432425 CDK8P49336 464 aa5.94□□□□□ -1.46
CLK1-204ENST00000432425 TSNAXIP1Q2TAA8 658 aa5.94□□□□□ -1.46
CLK1-204ENST00000432425 FAM181AQ8N9Y4 354 aa5.94□□□□□ -1.46
CLK1-204ENST00000432425 PHC3Q8NDX5 983 aa5.94□□□□□ -1.46
CLK1-204ENST00000432425 FLCNQ8NFG4 579 aa5.94□□□□□ -1.46
CLK1-204ENST00000432425 JARID2Q92833 1246 aaPredicted RBP5.94□□□□□ -1.46
CLK1-204ENST00000432425 FBXL18Q96ME1 805 aa5.94□□□□□ -1.46
CLK1-204ENST00000432425 OAS3Q9Y6K5 1087 aaKnown RBP5.94□□□□□ -1.46
CLK1-204ENST00000432425 LRIG2O94898 1065 aa5.93□□□□□ -1.46
CLK1-204ENST00000432425 PWP1Q13610 501 aa5.93□□□□□ -1.46
CLK1-204ENST00000432425 ARMCX6Q7L4S7 300 aa5.93□□□□□ -1.46
CLK1-204ENST00000432425 RELL1Q8IUW5 271 aa5.93□□□□□ -1.46
CLK1-204ENST00000432425 HID1Q8IV36 788 aa5.93□□□□□ -1.46
CLK1-204ENST00000432425 STK11IPQ8N1F8 1099 aa5.93□□□□□ -1.46
CLK1-204ENST00000432425 NETO1Q8TDF5 533 aa5.93□□□□□ -1.46
CLK1-204ENST00000432425 GTF2IRD1Q9UHL9 959 aa5.93□□□□□ -1.46
CLK1-204ENST00000432425 GRK4P32298 578 aa5.92□□□□□ -1.46
CLK1-204ENST00000432425 GBP2P32456 591 aaPredicted RBP5.92□□□□□ -1.46
CLK1-204ENST00000432425 IRAK1P51617 712 aa5.92□□□□□ -1.46
CLK1-204ENST00000432425 TP53INP2Q8IXH6 220 aa5.92□□□□□ -1.46
CLK1-204ENST00000432425 PLD6Q8N2A8 252 aaKnown RBP5.92□□□□□ -1.46
CLK1-204ENST00000432425 MISP3Q96FF7 219 aa5.92□□□□□ -1.46
CLK1-204ENST00000432425 FOXQ1Q9C009 403 aa5.92□□□□□ -1.46
CLK1-204ENST00000432425 FBRSQ9HAH7 460 aa5.92□□□□□ -1.46
CLK1-204ENST00000432425 MKNK2Q9HBH9 465 aa5.92□□□□□ -1.46
CLK1-204ENST00000432425 TACC3Q9Y6A5 838 aa5.92□□□□□ -1.46
CLK1-204ENST00000432425 F6X3S4 739 aa5.91□□□□□ -1.46
CLK1-204ENST00000432425 BPNT1O95861 308 aa5.91□□□□□ -1.46
CLK1-204ENST00000432425 ITIH2P19823 946 aa5.91□□□□□ -1.46
CLK1-204ENST00000432425 MFAP1P55081 439 aaKnown RBP5.91□□□□□ -1.46
CLK1-204ENST00000432425 RPL6Q02878 288 aaKnown RBP5.91□□□□□ -1.46
CLK1-204ENST00000432425 PDE4BQ07343 736 aa5.91□□□□□ -1.46
CLK1-204ENST00000432425 RSRP1Q9BUV0 290 aa5.91□□□□□ -1.46
CLK1-204ENST00000432425 SLC5A6Q9Y289 635 aa5.91□□□□□ -1.46
CLK1-204ENST00000432425 GFRA2O00451 464 aa5.91□□□□□ -1.46
CLK1-204ENST00000432425 CEACAM5P06731 702 aa5.91□□□□□ -1.46
CLK1-204ENST00000432425 CAP2P40123 477 aa5.91□□□□□ -1.46
CLK1-204ENST00000432425 LMNB2Q03252 620 aa5.91□□□□□ -1.46
CLK1-204ENST00000432425 IFI16Q16666 785 aaKnown RBP5.91□□□□□ -1.46
CLK1-204ENST00000432425 CCDC84Q86UT8 332 aaPredicted RBP5.91□□□□□ -1.46
CLK1-204ENST00000432425 AGBL5Q8NDL9 886 aa5.91□□□□□ -1.46
CLK1-204ENST00000432425 TMEM74Q96NL1 305 aa5.91□□□□□ -1.46
CLK1-204ENST00000432425 KRTAP4-9Q9BYQ8 210 aa5.91□□□□□ -1.46
CLK1-204ENST00000432425 GNAT3A8MTJ3 354 aa5.9□□□□□ -1.47
CLK1-204ENST00000432425 PF4P02776 101 aa5.9□□□□□ -1.47
CLK1-204ENST00000432425 PGRP06401 933 aa5.9□□□□□ -1.47
CLK1-204ENST00000432425 OXCT1P55809 520 aa5.9□□□□□ -1.47
CLK1-204ENST00000432425 CAMK2GQ13555 558 aaPredicted RBP5.9□□□□□ -1.47
CLK1-204ENST00000432425 SLBPQ14493 270 aaKnown RBP eCLIP5.9□□□□□ -1.47
CLK1-204ENST00000432425 NKG7Q16617 165 aa5.9□□□□□ -1.47
CLK1-204ENST00000432425 MFSD2AQ8NA29 543 aa5.9□□□□□ -1.47
CLK1-204ENST00000432425 MIPEPQ99797 713 aa5.9□□□□□ -1.47
CLK1-204ENST00000432425 PRDM5Q9NQX1 630 aaPredicted RBP5.9□□□□□ -1.47
CLK1-204ENST00000432425 TMEM265A0A087WTH1 108 aa5.89□□□□□ -1.47
CLK1-204ENST00000432425 IGF2BP3O00425 579 aaKnown RBP eCLIP5.89□□□□□ -1.47
CLK1-204ENST00000432425 SNAP47Q5SQN1 464 aa5.89□□□□□ -1.47
CLK1-204ENST00000432425 BNC2Q6ZN30 1099 aaPredicted RBP5.89□□□□□ -1.47
CLK1-204ENST00000432425 ABI1Q8IZP0 508 aa5.89□□□□□ -1.47
CLK1-204ENST00000432425 BCL7CQ8WUZ0 217 aaPredicted RBP5.89□□□□□ -1.47
CLK1-204ENST00000432425 HRASLS5Q96KN8 279 aa5.89□□□□□ -1.47
CLK1-204ENST00000432425 HEXIM2Q96MH2 286 aaKnown RBP5.89□□□□□ -1.47
CLK1-204ENST00000432425 TPX2Q9ULW0 747 aaKnown RBP5.89□□□□□ -1.47
CLK1-204ENST00000432425 U3KQE9 123 aa5.89□□□□□ -1.47
CLK1-204ENST00000432425 MINDY4BA8MYZ0 360 aa5.88□□□□□ -1.47
CLK1-204ENST00000432425 EOMESO95936 686 aa5.88□□□□□ -1.47
CLK1-204ENST00000432425 CST3P01034 146 aaPredicted RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms