RNA–Protein interactions for RNA: ENST00000430321.5

UBR3-204, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,411 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-204ENST00000430321 ZNF341Q9BYN7 854 aa6.64□□□□□ -1.35
UBR3-204ENST00000430321 TSGA10Q9BZW7 698 aa6.64□□□□□ -1.35
UBR3-204ENST00000430321 FAM114A2Q9NRY5 505 aa6.64□□□□□ -1.35
UBR3-204ENST00000430321 DIP2AQ14689 1571 aa6.64□□□□□ -1.35
UBR3-204ENST00000430321 GPATCH4Q5T3I0 446 aaKnown RBP6.64□□□□□ -1.35
UBR3-204ENST00000430321 LEKR1Q6ZMV7 388 aa6.64□□□□□ -1.35
UBR3-204ENST00000430321 FASTKD5Q7L8L6 764 aaKnown RBP6.64□□□□□ -1.35
UBR3-204ENST00000430321 PNMA8AQ86V59 439 aaPredicted RBP6.64□□□□□ -1.35
UBR3-204ENST00000430321 SPATA5Q8NB90 893 aa6.64□□□□□ -1.35
UBR3-204ENST00000430321 MAK16Q9BXY0 300 aaKnown RBP6.64□□□□□ -1.35
UBR3-204ENST00000430321 STIM2Q9P246 746 aa6.64□□□□□ -1.35
UBR3-204ENST00000430321 LAMC1P11047 1609 aa6.64□□□□□ -1.35
UBR3-204ENST00000430321 SPATA31A3Q5VYP0 1347 aa6.64□□□□□ -1.35
UBR3-204ENST00000430321 F6X3S4 739 aa6.64□□□□□ -1.35
UBR3-204ENST00000430321 ALDH3A1P30838 453 aa6.64□□□□□ -1.35
UBR3-204ENST00000430321 ASIC1P78348 528 aa6.64□□□□□ -1.35
UBR3-204ENST00000430321 CDC42EP1Q00587 391 aa6.64□□□□□ -1.35
UBR3-204ENST00000430321 NONOQ15233 471 aaKnown RBP eCLIP6.64□□□□□ -1.35
UBR3-204ENST00000430321 UVSSAQ2YD98 709 aa6.64□□□□□ -1.35
UBR3-204ENST00000430321 NUDT18Q6ZVK8 323 aa6.64□□□□□ -1.35
UBR3-204ENST00000430321 ELMOD1Q8N336 334 aa6.64□□□□□ -1.35
UBR3-204ENST00000430321 BBS5Q8N3I7 341 aa6.64□□□□□ -1.35
UBR3-204ENST00000430321 IQUBQ8NA54 791 aa6.64□□□□□ -1.35
UBR3-204ENST00000430321 CTNNBL1Q8WYA6 563 aaPredicted RBP6.64□□□□□ -1.35
UBR3-204ENST00000430321 INO80BQ9C086 356 aaPredicted RBP6.64□□□□□ -1.35
UBR3-204ENST00000430321 SUGT1Q9Y2Z0 365 aa6.64□□□□□ -1.35
UBR3-204ENST00000430321 USP8P40818 1118 aa6.64□□□□□ -1.35
UBR3-204ENST00000430321 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.64□□□□□ -1.35
UBR3-204ENST00000430321 DONSONQ9NYP3 566 aa6.64□□□□□ -1.35
UBR3-204ENST00000430321 CARMIL3Q8ND23 1372 aa6.64□□□□□ -1.35
UBR3-204ENST00000430321 ABCC3O15438 1527 aa6.64□□□□□ -1.35
UBR3-204ENST00000430321 ZC3H13Q5T200 1668 aaKnown RBP6.64□□□□□ -1.35
UBR3-204ENST00000430321 A0A1B0GVL5 298 aa6.63□□□□□ -1.35
UBR3-204ENST00000430321 GIGYF1O75420 1035 aaPredicted RBP6.63□□□□□ -1.35
UBR3-204ENST00000430321 DDAH1O94760 285 aa6.63□□□□□ -1.35
UBR3-204ENST00000430321 MBD4O95243 580 aa6.63□□□□□ -1.35
UBR3-204ENST00000430321 KRT83P78385 493 aa6.63□□□□□ -1.35
UBR3-204ENST00000430321 KIAA0753Q2KHM9 967 aa6.63□□□□□ -1.35
UBR3-204ENST00000430321 CEP135Q66GS9 1140 aa6.63□□□□□ -1.35
UBR3-204ENST00000430321 DHX32Q7L7V1 743 aaKnown RBP6.63□□□□□ -1.35
UBR3-204ENST00000430321 CROCCP2Q86T23 111 aa6.63□□□□□ -1.35
UBR3-204ENST00000430321 FSIP1Q8NA03 581 aa6.63□□□□□ -1.35
UBR3-204ENST00000430321 GSDMBQ8TAX9 411 aa6.63□□□□□ -1.35
UBR3-204ENST00000430321 NUCKS1Q9H1E3 243 aaKnown RBP6.63□□□□□ -1.35
UBR3-204ENST00000430321 MAGEF1Q9HAY2 307 aa6.63□□□□□ -1.35
UBR3-204ENST00000430321 SNRKQ9NRH2 765 aa6.63□□□□□ -1.35
UBR3-204ENST00000430321 SMARCA5O60264 1052 aaPredicted RBP6.63□□□□□ -1.35
UBR3-204ENST00000430321 CCND2P30279 289 aa6.63□□□□□ -1.35
UBR3-204ENST00000430321 ASPRV1Q53RT3 343 aa6.63□□□□□ -1.35
UBR3-204ENST00000430321 MFSD14BQ5SR56 506 aa6.63□□□□□ -1.35
UBR3-204ENST00000430321 TAOK1Q7L7X3 1001 aa6.63□□□□□ -1.35
UBR3-204ENST00000430321 FOXP4Q8IVH2 680 aaPredicted RBP6.63□□□□□ -1.35
UBR3-204ENST00000430321 DNAJC10Q8IXB1 793 aa6.63□□□□□ -1.35
UBR3-204ENST00000430321 TRPC6Q9Y210 931 aa6.63□□□□□ -1.35
UBR3-204ENST00000430321 CPS1P31327 1500 aa6.63□□□□□ -1.35
UBR3-204ENST00000430321 USP17L3A6NCW0 530 aa6.63□□□□□ -1.35
UBR3-204ENST00000430321 USP17L4A6NCW7 530 aa6.63□□□□□ -1.35
UBR3-204ENST00000430321 TNNC2P02585 160 aa6.63□□□□□ -1.35
UBR3-204ENST00000430321 ZSCAN20P17040 1043 aaPredicted RBP6.63□□□□□ -1.35
UBR3-204ENST00000430321 USP17L1Q7RTZ2 530 aa6.63□□□□□ -1.35
UBR3-204ENST00000430321 FAM167AQ96KS9 214 aa6.63□□□□□ -1.35
UBR3-204ENST00000430321 NACC1Q96RE7 527 aa6.63□□□□□ -1.35
UBR3-204ENST00000430321 RPS6KC1Q96S38 1066 aa6.63□□□□□ -1.35
UBR3-204ENST00000430321 PRPF6O94906 941 aaKnown RBP6.63□□□□□ -1.35
UBR3-204ENST00000430321 FMNL1O95466 1100 aaPredicted RBP6.63□□□□□ -1.35
UBR3-204ENST00000430321 TRIM27P14373 513 aa6.63□□□□□ -1.35
UBR3-204ENST00000430321 IL13P35225 146 aa6.63□□□□□ -1.35
UBR3-204ENST00000430321 CFAP58Q5T655 872 aa6.63□□□□□ -1.35
UBR3-204ENST00000430321 TTLL5Q6EMB2 1281 aa6.63□□□□□ -1.35
UBR3-204ENST00000430321 CNPY4Q8N129 248 aa6.63□□□□□ -1.35
UBR3-204ENST00000430321 CEP112Q8N8E3 955 aa6.63□□□□□ -1.35
UBR3-204ENST00000430321 IPO4Q8TEX9 1081 aaKnown RBP6.63□□□□□ -1.35
UBR3-204ENST00000430321 ATP6V0A1Q93050 837 aa6.63□□□□□ -1.35
UBR3-204ENST00000430321 CSRNP1Q96S65 589 aa6.63□□□□□ -1.35
UBR3-204ENST00000430321 LCMT1Q9UIC8 334 aa6.63□□□□□ -1.35
UBR3-204ENST00000430321 GRAPQ13588 217 aa6.63□□□□□ -1.35
UBR3-204ENST00000430321 CERKLQ49MI3 558 aaPredicted RBP6.63□□□□□ -1.35
UBR3-204ENST00000430321 TNNI3KQ59H18 835 aa6.63□□□□□ -1.35
UBR3-204ENST00000430321 C6orf163Q5TEZ5 329 aa6.63□□□□□ -1.35
UBR3-204ENST00000430321 MIS18BP1Q6P0N0 1132 aa6.63□□□□□ -1.35
UBR3-204ENST00000430321 KCNV1Q6PIU1 500 aa6.63□□□□□ -1.35
UBR3-204ENST00000430321 FCHSD1Q86WN1 690 aa6.63□□□□□ -1.35
UBR3-204ENST00000430321 ANKRD35Q8N283 1001 aa6.63□□□□□ -1.35
UBR3-204ENST00000430321 DEPTORQ8TB45 409 aa6.63□□□□□ -1.35
UBR3-204ENST00000430321 GRAPLQ8TC17 118 aaPredicted RBP6.63□□□□□ -1.35
UBR3-204ENST00000430321 THUMPD2Q9BTF0 503 aaKnown RBP6.63□□□□□ -1.35
UBR3-204ENST00000430321 TEKT3Q9BXF9 490 aa6.63□□□□□ -1.35
UBR3-204ENST00000430321 MTUS1Q9ULD2 1270 aa6.63□□□□□ -1.35
UBR3-204ENST00000430321 IQSEC3Q9UPP2 1182 aaPredicted RBP6.63□□□□□ -1.35
UBR3-204ENST00000430321 DNM3Q9UQ16 869 aa6.63□□□□□ -1.35
UBR3-204ENST00000430321 MRVI1Q9Y6F6 885 aa6.63□□□□□ -1.35
UBR3-204ENST00000430321 FPGT-TNNI3KV9GXZ4 949 aa6.63□□□□□ -1.35
UBR3-204ENST00000430321 TSPOAP1O95153 1857 aa6.62□□□□□ -1.35
UBR3-204ENST00000430321 CCT6AP40227 531 aaKnown RBP6.62□□□□□ -1.35
UBR3-204ENST00000430321 SYKP43405 635 aa6.62□□□□□ -1.35
UBR3-204ENST00000430321 CRKLP46109 303 aaKnown RBP6.62□□□□□ -1.35
UBR3-204ENST00000430321 POSTNQ15063 836 aa6.62□□□□□ -1.35
UBR3-204ENST00000430321 KYAT1Q16773 422 aa6.62□□□□□ -1.35
UBR3-204ENST00000430321 MUM1L1Q5H9M0 696 aa6.62□□□□□ -1.35
UBR3-204ENST00000430321 RNF34Q969K3 372 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms