RNA–Protein interactions for RNA: ENST00000429899.1

ATG4B-211, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 524 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-211ENST00000429899 LHX8Q68G74 356 aa12.6□□□□□ -0.39
ATG4B-211ENST00000429899 SMC4Q9NTJ3 1288 aa12.6□□□□□ -0.39
ATG4B-211ENST00000429899 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.6□□□□□ -0.39
ATG4B-211ENST00000429899 GTF3C3Q9Y5Q9 886 aa12.6□□□□□ -0.39
ATG4B-211ENST00000429899 KIF16BQ96L93 1317 aa12.6□□□□□ -0.39
ATG4B-211ENST00000429899 SLURP2P0DP57 97 aa12.59□□□□□ -0.39
ATG4B-211ENST00000429899 NFIAQ12857 509 aa12.59□□□□□ -0.39
ATG4B-211ENST00000429899 FAM110CQ1W6H9 321 aa12.59□□□□□ -0.39
ATG4B-211ENST00000429899 CCDC30Q5VVM6 783 aa12.59□□□□□ -0.39
ATG4B-211ENST00000429899 LDHAL6AQ6ZMR3 332 aa12.59□□□□□ -0.39
ATG4B-211ENST00000429899 ZFPM1Q8IX07 1006 aa12.59□□□□□ -0.39
ATG4B-211ENST00000429899 MRPL50Q8N5N7 158 aaKnown RBP12.59□□□□□ -0.39
ATG4B-211ENST00000429899 PRDM5Q9NQX1 630 aaPredicted RBP12.59□□□□□ -0.39
ATG4B-211ENST00000429899 CHMP3Q9Y3E7 222 aa12.59□□□□□ -0.39
ATG4B-211ENST00000429899 ATRNL1Q5VV63 1379 aa12.58□□□□□ -0.4
ATG4B-211ENST00000429899 NEFLP07196 543 aa12.58□□□□□ -0.4
ATG4B-211ENST00000429899 CCND3P30281 292 aaPredicted RBP12.58□□□□□ -0.4
ATG4B-211ENST00000429899 UBE4AQ14139 1066 aa12.58□□□□□ -0.4
ATG4B-211ENST00000429899 POTEEQ6S8J3 1075 aa12.58□□□□□ -0.4
ATG4B-211ENST00000429899 CCDC84Q86UT8 332 aaPredicted RBP12.58□□□□□ -0.4
ATG4B-211ENST00000429899 SCYL3Q8IZE3 742 aa12.58□□□□□ -0.4
ATG4B-211ENST00000429899 BADQ92934 168 aa12.58□□□□□ -0.4
ATG4B-211ENST00000429899 MRIQ9BWK5 157 aa12.58□□□□□ -0.4
ATG4B-211ENST00000429899 CNNM1Q9NRU3 951 aa12.58□□□□□ -0.4
ATG4B-211ENST00000429899 ATP11BQ9Y2G3 1177 aa12.58□□□□□ -0.4
ATG4B-211ENST00000429899 TRIM75PA6NK02 468 aa12.57□□□□□ -0.4
ATG4B-211ENST00000429899 RTP1P59025 263 aa12.57□□□□□ -0.4
ATG4B-211ENST00000429899 IRX6P78412 446 aaPredicted RBP12.57□□□□□ -0.4
ATG4B-211ENST00000429899 CACNB2Q08289 660 aaPredicted RBP12.57□□□□□ -0.4
ATG4B-211ENST00000429899 CCDC85BQ15834 202 aaPredicted RBP12.57□□□□□ -0.4
ATG4B-211ENST00000429899 EPHA10Q5JZY3 1008 aa12.57□□□□□ -0.4
ATG4B-211ENST00000429899 C20orf194Q5TEA3 1177 aa12.57□□□□□ -0.4
ATG4B-211ENST00000429899 HHIPL2Q6UWX4 724 aa12.57□□□□□ -0.4
ATG4B-211ENST00000429899 FBXO33Q7Z6M2 555 aa12.57□□□□□ -0.4
ATG4B-211ENST00000429899 EPHX3Q9H6B9 360 aa12.57□□□□□ -0.4
ATG4B-211ENST00000429899 FAM198AQ9UFP1 575 aa12.57□□□□□ -0.4
ATG4B-211ENST00000429899 AGTPBP1Q9UPW5 1226 aa12.57□□□□□ -0.4
ATG4B-211ENST00000429899 CHD9Q3L8U1 2897 aa12.56□□□□□ -0.4
ATG4B-211ENST00000429899 PEX10O60683 326 aa12.56□□□□□ -0.4
ATG4B-211ENST00000429899 CDC42EP5Q6NZY7 148 aa12.56□□□□□ -0.4
ATG4B-211ENST00000429899 LMBR1LQ6UX01 489 aa12.56□□□□□ -0.4
ATG4B-211ENST00000429899 TBC1D22AQ8WUA7 517 aa12.56□□□□□ -0.4
ATG4B-211ENST00000429899 RNPC3Q96LT9 517 aaKnown RBP12.56□□□□□ -0.4
ATG4B-211ENST00000429899 GAS2L1Q99501 681 aaPredicted RBP12.56□□□□□ -0.4
ATG4B-211ENST00000429899 PUS3Q9BZE2 481 aaKnown RBP12.56□□□□□ -0.4
ATG4B-211ENST00000429899 PICK1Q9NRD5 415 aa12.56□□□□□ -0.4
ATG4B-211ENST00000429899 SMCHD1A6NHR9 2005 aa12.55□□□□□ -0.4
ATG4B-211ENST00000429899 CDK5RAP2Q96SN8 1893 aa12.55□□□□□ -0.4
ATG4B-211ENST00000429899 TRIM27P14373 513 aa12.55□□□□□ -0.4
ATG4B-211ENST00000429899 DNAJB2P25686 324 aa12.55□□□□□ -0.4
ATG4B-211ENST00000429899 TMEM31Q5JXX7 168 aa12.55□□□□□ -0.4
ATG4B-211ENST00000429899 ZNF576Q9H609 170 aa12.55□□□□□ -0.4
ATG4B-211ENST00000429899 TNNQ9UQP3 1299 aa12.55□□□□□ -0.4
ATG4B-211ENST00000429899 ZKSCAN1P17029 563 aaPredicted RBP12.54□□□□□ -0.4
ATG4B-211ENST00000429899 MRE11P49959 708 aa12.54□□□□□ -0.4
ATG4B-211ENST00000429899 CCL14Q16627 93 aa12.54□□□□□ -0.4
ATG4B-211ENST00000429899 CCDC57Q2TAC2 916 aa12.54□□□□□ -0.4
ATG4B-211ENST00000429899 ZKSCAN2Q63HK3 967 aa12.54□□□□□ -0.4
ATG4B-211ENST00000429899 ATF7IPQ6VMQ6 1270 aa12.54□□□□□ -0.4
ATG4B-211ENST00000429899 PNMA3Q9UL41 463 aa12.54□□□□□ -0.4
ATG4B-211ENST00000429899 DAGLAQ9Y4D2 1042 aa12.54□□□□□ -0.4
ATG4B-211ENST00000429899 CHD7Q9P2D1 2997 aa12.53□□□□□ -0.4
ATG4B-211ENST00000429899 FRAT2O75474 233 aaPredicted RBP12.53□□□□□ -0.4
ATG4B-211ENST00000429899 RLBP1P12271 317 aa12.53□□□□□ -0.4
ATG4B-211ENST00000429899 GCLCP48506 637 aaPredicted RBP12.53□□□□□ -0.4
ATG4B-211ENST00000429899 DIXDC1Q155Q3 683 aa12.53□□□□□ -0.4
ATG4B-211ENST00000429899 TAF7LQ5H9L4 462 aa12.53□□□□□ -0.4
ATG4B-211ENST00000429899 ERICH6BQ5W0A0 696 aa12.53□□□□□ -0.4
ATG4B-211ENST00000429899 SH3BP5LQ7L8J4 393 aa12.53□□□□□ -0.4
ATG4B-211ENST00000429899 VPS37DQ86XT2 251 aa12.53□□□□□ -0.4
ATG4B-211ENST00000429899 LINS1Q8NG48 757 aa12.53□□□□□ -0.4
ATG4B-211ENST00000429899 ARHGAP45Q92619 1136 aa12.53□□□□□ -0.4
ATG4B-211ENST00000429899 FRAT1Q92837 279 aaPredicted RBP12.53□□□□□ -0.4
ATG4B-211ENST00000429899 P2RX7Q99572 595 aaKnown RBP12.53□□□□□ -0.4
ATG4B-211ENST00000429899 PRDM12Q9H4Q4 367 aa12.53□□□□□ -0.4
ATG4B-211ENST00000429899 NOB1Q9ULX3 412 aaKnown RBP12.53□□□□□ -0.4
ATG4B-211ENST00000429899 MAST3O60307 1309 aa12.53□□□□□ -0.4
ATG4B-211ENST00000429899 PTPRCP08575 1304 aa12.53□□□□□ -0.4
ATG4B-211ENST00000429899 FAM86C2PA6NEL3 165 aa12.52□□□□□ -0.41
ATG4B-211ENST00000429899 XRCC5P13010 732 aaKnown RBP12.52□□□□□ -0.41
ATG4B-211ENST00000429899 AKNAD1Q5T1N1 836 aa12.52□□□□□ -0.41
ATG4B-211ENST00000429899 DNAAF4Q8WXU2 420 aa12.52□□□□□ -0.41
ATG4B-211ENST00000429899 TIFAQ96CG3 184 aa12.52□□□□□ -0.41
ATG4B-211ENST00000429899 CRBNQ96SW2 442 aa12.52□□□□□ -0.41
ATG4B-211ENST00000429899 NUDT12Q9BQG2 462 aa12.52□□□□□ -0.41
ATG4B-211ENST00000429899 ASCC2Q9H1I8 757 aaPredicted RBP12.52□□□□□ -0.41
ATG4B-211ENST00000429899 SIPA1L1O43166 1804 aa12.52□□□□□ -0.41
ATG4B-211ENST00000429899 ZNFX1Q9P2E3 1918 aaKnown RBP12.52□□□□□ -0.41
ATG4B-211ENST00000429899 SLC4A2P04920 1241 aa12.51□□□□□ -0.41
ATG4B-211ENST00000429899 BMP1P13497 986 aa12.51□□□□□ -0.41
ATG4B-211ENST00000429899 IGFBP4P22692 258 aa12.51□□□□□ -0.41
ATG4B-211ENST00000429899 EPHB4P54760 987 aa12.51□□□□□ -0.41
ATG4B-211ENST00000429899 SH3RF1Q7Z6J0 888 aa12.51□□□□□ -0.41
ATG4B-211ENST00000429899 PANK1Q8TE04 598 aa12.51□□□□□ -0.41
ATG4B-211ENST00000429899 USP6NLQ92738 828 aa12.51□□□□□ -0.41
ATG4B-211ENST00000429899 STK31Q9BXU1 1019 aa12.51□□□□□ -0.41
ATG4B-211ENST00000429899 CHMP4AQ9BY43 222 aa12.51□□□□□ -0.41
ATG4B-211ENST00000429899 MORF4L1Q9UBU8 362 aa12.51□□□□□ -0.41
ATG4B-211ENST00000429899 SUGT1Q9Y2Z0 365 aa12.51□□□□□ -0.41
ATG4B-211ENST00000429899 IPO8O15397 1037 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms