RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 NFE2L3Q9Y4A8 694 aa9.22□□□□□ -0.93
HPS4-205ENST00000429411 HEG1Q9ULI3 1381 aa9.22□□□□□ -0.93
HPS4-205ENST00000429411 YEATS4O95619 227 aa9.22□□□□□ -0.93
HPS4-205ENST00000429411 SLC5A1P13866 664 aa9.22□□□□□ -0.93
HPS4-205ENST00000429411 CDC27P30260 824 aa9.22□□□□□ -0.93
HPS4-205ENST00000429411 LONRF3Q496Y0 759 aa9.22□□□□□ -0.93
HPS4-205ENST00000429411 GPIHBP1Q8IV16 184 aa9.22□□□□□ -0.93
HPS4-205ENST00000429411 CCDC12Q8WUD4 166 aaPredicted RBP9.22□□□□□ -0.93
HPS4-205ENST00000429411 DPF2Q92785 391 aa9.22□□□□□ -0.93
HPS4-205ENST00000429411 IL17RAQ96F46 866 aa9.22□□□□□ -0.93
HPS4-205ENST00000429411 ST7Q9NRC1 585 aa9.22□□□□□ -0.93
HPS4-205ENST00000429411 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.21□□□□□ -0.93
HPS4-205ENST00000429411 TPM1P09493 284 aa9.21□□□□□ -0.93
HPS4-205ENST00000429411 XBP1P17861 261 aa9.21□□□□□ -0.93
HPS4-205ENST00000429411 CASQ1P31415 396 aa9.21□□□□□ -0.93
HPS4-205ENST00000429411 RFC4P35249 363 aa9.21□□□□□ -0.93
HPS4-205ENST00000429411 IGHMBP2P38935 993 aaKnown RBP9.21□□□□□ -0.93
HPS4-205ENST00000429411 TTF1Q15361 905 aaPredicted RBP9.21□□□□□ -0.93
HPS4-205ENST00000429411 ZNF622Q969S3 477 aaKnown RBP eCLIP9.21□□□□□ -0.938e-7■□□□□ 8.8
HPS4-205ENST00000429411 EEF2KMTQ96G04 330 aa9.21□□□□□ -0.93
HPS4-205ENST00000429411 PPP1R13BQ96KQ4 1090 aa9.21□□□□□ -0.93
HPS4-205ENST00000429411 PLIN2Q99541 437 aa9.21□□□□□ -0.93
HPS4-205ENST00000429411 OGFRQ9NZT2 677 aa9.21□□□□□ -0.93
HPS4-205ENST00000429411 SERTAD1Q9UHV2 236 aa9.21□□□□□ -0.93
HPS4-205ENST00000429411 KDM6AO15550 1401 aaPredicted RBP9.21□□□□□ -0.93
HPS4-205ENST00000429411 GTF2F1P35269 517 aaKnown RBP eCLIP9.21□□□□□ -0.94
HPS4-205ENST00000429411 BCAMP50895 628 aa9.21□□□□□ -0.94
HPS4-205ENST00000429411 FBXO38Q6PIJ6 1188 aa9.21□□□□□ -0.94
HPS4-205ENST00000429411 SMYD4Q8IYR2 804 aaPredicted RBP9.21□□□□□ -0.94
HPS4-205ENST00000429411 SEC31BQ9NQW1 1179 aa9.21□□□□□ -0.94
HPS4-205ENST00000429411 VPS54Q9P1Q0 977 aa9.21□□□□□ -0.94
HPS4-205ENST00000429411 PUF60Q9UHX1 559 aaKnown RBP9.21□□□□□ -0.94
HPS4-205ENST00000429411 ZBTB1Q9Y2K1 713 aa9.21□□□□□ -0.94
HPS4-205ENST00000429411 OVOS2A0A0G2JMS6 1433 aa9.21□□□□□ -0.94
HPS4-205ENST00000429411 NCAPD2Q15021 1401 aa9.21□□□□□ -0.94
HPS4-205ENST00000429411 CCT6AP40227 531 aaKnown RBP9.21□□□□□ -0.94
HPS4-205ENST00000429411 ANTXR2P58335 489 aa9.21□□□□□ -0.94
HPS4-205ENST00000429411 ZNF174Q15697 407 aa9.21□□□□□ -0.94
HPS4-205ENST00000429411 ATL3Q6DD88 541 aa9.21□□□□□ -0.94
HPS4-205ENST00000429411 KRI1Q8N9T8 703 aaKnown RBP9.21□□□□□ -0.94
HPS4-205ENST00000429411 ERO1AQ96HE7 468 aa9.21□□□□□ -0.94
HPS4-205ENST00000429411 FAM208AQ9UK61 1670 aaKnown RBP9.2□□□□□ -0.94
HPS4-205ENST00000429411 KIF2AO00139 706 aaPredicted RBP9.2□□□□□ -0.94
HPS4-205ENST00000429411 CCZ1BP86790 482 aa9.2□□□□□ -0.94
HPS4-205ENST00000429411 CCZ1P86791 482 aaPredicted RBP9.2□□□□□ -0.94
HPS4-205ENST00000429411 ARMCX5Q6P1M9 558 aa9.2□□□□□ -0.94
HPS4-205ENST00000429411 ZSWIM5Q9P217 1185 aa9.2□□□□□ -0.94
HPS4-205ENST00000429411 MEGF6O75095 1541 aa9.2□□□□□ -0.94
HPS4-205ENST00000429411 BAZ2BQ9UIF8 2168 aaKnown RBP9.2□□□□□ -0.94
HPS4-205ENST00000429411 CMA1P23946 247 aa9.2□□□□□ -0.94
HPS4-205ENST00000429411 SLC39A14Q15043 492 aa9.2□□□□□ -0.94
HPS4-205ENST00000429411 KIF4BQ2VIQ3 1234 aa9.2□□□□□ -0.94
HPS4-205ENST00000429411 PROM2Q8N271 834 aa9.2□□□□□ -0.94
HPS4-205ENST00000429411 ENGASEQ8NFI3 743 aa9.2□□□□□ -0.94
HPS4-205ENST00000429411 CYP2D7A0A087X1C5 515 aa9.19□□□□□ -0.94
HPS4-205ENST00000429411 ZSCAN12O43309 604 aa9.19□□□□□ -0.94
HPS4-205ENST00000429411 GUCY1A2P33402 732 aa9.19□□□□□ -0.94
HPS4-205ENST00000429411 KMT5BQ4FZB7 885 aa9.19□□□□□ -0.94
HPS4-205ENST00000429411 FILIP1LQ4L180 1135 aa9.19□□□□□ -0.94
HPS4-205ENST00000429411 MB21D2Q8IYB1 491 aaPredicted RBP9.19□□□□□ -0.94
HPS4-205ENST00000429411 IFNL3Q8IZI9 196 aa9.19□□□□□ -0.94
HPS4-205ENST00000429411 ZBTB38Q8NAP3 1195 aaPredicted RBP9.19□□□□□ -0.94
HPS4-205ENST00000429411 SPATA5Q8NB90 893 aa9.19□□□□□ -0.94
HPS4-205ENST00000429411 WASF1Q92558 559 aa9.19□□□□□ -0.94
HPS4-205ENST00000429411 BAG1Q99933 345 aaPredicted RBP9.19□□□□□ -0.94
HPS4-205ENST00000429411 ALDH8A1Q9H2A2 487 aaPredicted RBP9.19□□□□□ -0.94
HPS4-205ENST00000429411 BRMS1Q9HCU9 246 aa9.19□□□□□ -0.94
HPS4-205ENST00000429411 POLR3EQ9NVU0 708 aa9.19□□□□□ -0.94
HPS4-205ENST00000429411 SRP68Q9UHB9 627 aaKnown RBP9.19□□□□□ -0.94
HPS4-205ENST00000429411 MROH7-TTC4A0A0A0MT08 1334 aa9.19□□□□□ -0.94
HPS4-205ENST00000429411 NEDD4P46934 1319 aa9.19□□□□□ -0.94
HPS4-205ENST00000429411 VWA3AA6NCI4 1184 aa9.19□□□□□ -0.94
HPS4-205ENST00000429411 ONECUT3O60422 494 aaPredicted RBP9.19□□□□□ -0.94
HPS4-205ENST00000429411 SEC31AO94979 1220 aaKnown RBP9.19□□□□□ -0.94
HPS4-205ENST00000429411 CTSWP56202 376 aa9.19□□□□□ -0.94
HPS4-205ENST00000429411 EVCP57679 992 aa9.19□□□□□ -0.94
HPS4-205ENST00000429411 FEZ1Q99689 392 aa9.19□□□□□ -0.94
HPS4-205ENST00000429411 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.19□□□□□ -0.945e-7■□□□□ 11.2
HPS4-205ENST00000429411 NIP7Q9Y221 180 aaKnown RBP eCLIP9.19□□□□□ -0.94
HPS4-205ENST00000429411 V9GY48 417 aaPredicted RBP9.19□□□□□ -0.94
HPS4-205ENST00000429411 PALLDQ8WX93 1383 aa9.19□□□□□ -0.94
HPS4-205ENST00000429411 A0A1W2PQ27 194 aa9.19□□□□□ -0.94
HPS4-205ENST00000429411 A0A1W2PQ64 194 aa9.19□□□□□ -0.94
HPS4-205ENST00000429411 A0A1W2PQD8 194 aa9.19□□□□□ -0.94
HPS4-205ENST00000429411 CCP110O43303 1012 aa9.19□□□□□ -0.94
HPS4-205ENST00000429411 PDE8BO95263 885 aa9.19□□□□□ -0.94
HPS4-205ENST00000429411 ZSCAN20P17040 1043 aaPredicted RBP9.19□□□□□ -0.94
HPS4-205ENST00000429411 ADD2P35612 726 aa9.19□□□□□ -0.94
HPS4-205ENST00000429411 DMTNQ08495 405 aa9.19□□□□□ -0.94
HPS4-205ENST00000429411 E4F1Q66K89 784 aaPredicted RBP9.19□□□□□ -0.94
HPS4-205ENST00000429411 TTLL11Q8NHH1 800 aa9.19□□□□□ -0.94
HPS4-205ENST00000429411 BLZF1Q9H2G9 400 aa9.19□□□□□ -0.94
HPS4-205ENST00000429411 HPS5Q9UPZ3 1129 aa9.19□□□□□ -0.94
HPS4-205ENST00000429411 RTCBQ9Y3I0 505 aaKnown RBP9.19□□□□□ -0.94
HPS4-205ENST00000429411 DCAF8L1A6NGE4 600 aa9.18□□□□□ -0.94
HPS4-205ENST00000429411 ZPR1O75312 459 aa9.18□□□□□ -0.94
HPS4-205ENST00000429411 CASP7P55210 303 aa9.18□□□□□ -0.94
HPS4-205ENST00000429411 GRIN1Q05586 938 aa9.18□□□□□ -0.94
HPS4-205ENST00000429411 MCM6Q14566 821 aa9.18□□□□□ -0.94
HPS4-205ENST00000429411 SHC4Q6S5L8 630 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms