RNA–Protein interactions for RNA: ENST00000428878.6

HIPK2-203, Transcript of homeodomain interacting protein kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIPK2, Length 3,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK2-203ENST00000428878 NPR1P16066 1061 aa12.75□□□□□ -0.37
HIPK2-203ENST00000428878 UBE2Q2Q8WVN8 375 aa12.75□□□□□ -0.37
HIPK2-203ENST00000428878 MTMR6Q9Y217 621 aa12.75□□□□□ -0.37
HIPK2-203ENST00000428878 ZSCAN23Q3MJ62 389 aa12.74□□□□□ -0.37
HIPK2-203ENST00000428878 CCAR1Q8IX12 1150 aaKnown RBP12.74□□□□□ -0.37
HIPK2-203ENST00000428878 SLC16A2P36021 539 aa12.74□□□□□ -0.37
HIPK2-203ENST00000428878 TEKT1Q969V4 418 aa12.74□□□□□ -0.37
HIPK2-203ENST00000428878 ZFP91Q96JP5 570 aaPredicted RBP12.74□□□□□ -0.37
HIPK2-203ENST00000428878 ZDHHC9Q9Y397 364 aa12.74□□□□□ -0.37
HIPK2-203ENST00000428878 COL24A1Q17RW2 1714 aa12.74□□□□□ -0.37
HIPK2-203ENST00000428878 DPEP1P16444 411 aa12.74□□□□□ -0.37
HIPK2-203ENST00000428878 PTMSP20962 102 aa12.74□□□□□ -0.37
HIPK2-203ENST00000428878 ZNF174Q15697 407 aa12.74□□□□□ -0.37
HIPK2-203ENST00000428878 RASGRP2Q7LDG7 609 aa12.74□□□□□ -0.37
HIPK2-203ENST00000428878 FLAD1Q8NFF5 587 aa12.74□□□□□ -0.37
HIPK2-203ENST00000428878 TSPY26PQ9H489 355 aa12.74□□□□□ -0.37
HIPK2-203ENST00000428878 SEC63Q9UGP8 760 aaKnown RBP12.74□□□□□ -0.37
HIPK2-203ENST00000428878 CFAP45Q9UL16 551 aa12.74□□□□□ -0.37
HIPK2-203ENST00000428878 POLRMTO00411 1230 aaKnown RBP12.73□□□□□ -0.37
HIPK2-203ENST00000428878 TTLL6Q8N841 843 aa12.73□□□□□ -0.37
HIPK2-203ENST00000428878 BRIP1Q9BX63 1249 aa12.73□□□□□ -0.37
HIPK2-203ENST00000428878 BTBD18B2RXH4 712 aa12.73□□□□□ -0.37
HIPK2-203ENST00000428878 MSNP26038 577 aaKnown RBP12.73□□□□□ -0.37
HIPK2-203ENST00000428878 APOA5Q6Q788 366 aa12.73□□□□□ -0.37
HIPK2-203ENST00000428878 CNKSR1Q969H4 720 aa12.73□□□□□ -0.37
HIPK2-203ENST00000428878 NSUN4Q96CB9 384 aaKnown RBP12.73□□□□□ -0.37
HIPK2-203ENST00000428878 BRWD3Q6RI45 1802 aa12.73□□□□□ -0.37
HIPK2-203ENST00000428878 CCDC196A0A1B0GTZ2 297 aa12.73□□□□□ -0.37
HIPK2-203ENST00000428878 ADRA2BP18089 450 aa12.73□□□□□ -0.37
HIPK2-203ENST00000428878 MCM7P33993 719 aa12.73□□□□□ -0.37
HIPK2-203ENST00000428878 TPD52L1Q16890 204 aaPredicted RBP12.73□□□□□ -0.37
HIPK2-203ENST00000428878 NIM1KQ8IY84 436 aa12.73□□□□□ -0.37
HIPK2-203ENST00000428878 NAP1L5Q96NT1 182 aaPredicted RBP12.73□□□□□ -0.37
HIPK2-203ENST00000428878 USP25Q9UHP3 1055 aa12.73□□□□□ -0.37
HIPK2-203ENST00000428878 CLEC11AQ9Y240 323 aa12.73□□□□□ -0.37
HIPK2-203ENST00000428878 PARP4Q9UKK3 1724 aaKnown RBP12.73□□□□□ -0.37
HIPK2-203ENST00000428878 BRD1O95696 1058 aa12.72□□□□□ -0.37
HIPK2-203ENST00000428878 ARID4AP29374 1257 aaPredicted RBP12.72□□□□□ -0.37
HIPK2-203ENST00000428878 AFMP43652 599 aa12.72□□□□□ -0.37
HIPK2-203ENST00000428878 CHMP4BP1P59074 171 aa12.72□□□□□ -0.37
HIPK2-203ENST00000428878 USH1GQ495M9 461 aa12.72□□□□□ -0.37
HIPK2-203ENST00000428878 KRT40Q6A162 431 aa12.72□□□□□ -0.37
HIPK2-203ENST00000428878 USP17L2Q6R6M4 530 aa12.72□□□□□ -0.37
HIPK2-203ENST00000428878 PGBD1Q96JS3 809 aa12.72□□□□□ -0.37
HIPK2-203ENST00000428878 TTC14Q96N46 770 aa12.72□□□□□ -0.37
HIPK2-203ENST00000428878 TM6SF1Q9BZW5 370 aa12.72□□□□□ -0.37
HIPK2-203ENST00000428878 DISP2A7MBM2 1401 aa12.72□□□□□ -0.37
HIPK2-203ENST00000428878 ECE2O60344 883 aa12.72□□□□□ -0.37
HIPK2-203ENST00000428878 PLCD1P51178 756 aa12.72□□□□□ -0.37
HIPK2-203ENST00000428878 NR5A1Q13285 461 aa12.72□□□□□ -0.37
HIPK2-203ENST00000428878 DLGAP5Q15398 846 aa12.72□□□□□ -0.37
HIPK2-203ENST00000428878 INTS4Q96HW7 963 aaKnown RBP12.72□□□□□ -0.37
HIPK2-203ENST00000428878 DCP1AQ9NPI6 582 aaPredicted RBP12.72□□□□□ -0.37
HIPK2-203ENST00000428878 MRC1P22897 1456 aa12.72□□□□□ -0.37
HIPK2-203ENST00000428878 PLEKHA8P1O95397 391 aa12.72□□□□□ -0.37
HIPK2-203ENST00000428878 DIS3L2Q8IYB7 885 aaKnown RBP12.72□□□□□ -0.37
HIPK2-203ENST00000428878 VGLL2Q8N8G2 317 aa12.72□□□□□ -0.37
HIPK2-203ENST00000428878 NSUN7Q8NE18 718 aaKnown RBP12.72□□□□□ -0.37
HIPK2-203ENST00000428878 USP28Q96RU2 1077 aa12.72□□□□□ -0.37
HIPK2-203ENST00000428878 PKD2L1Q9P0L9 805 aa12.72□□□□□ -0.37
HIPK2-203ENST00000428878 TMEM63CQ9P1W3 806 aa12.72□□□□□ -0.37
HIPK2-203ENST00000428878 CCDC194A0A1B0GVG4 234 aa12.71□□□□□ -0.37
HIPK2-203ENST00000428878 CDC27P30260 824 aa12.71□□□□□ -0.37
HIPK2-203ENST00000428878 NAPAP54920 295 aa12.71□□□□□ -0.37
HIPK2-203ENST00000428878 JAKMIP3Q5VZ66 844 aa12.71□□□□□ -0.37
HIPK2-203ENST00000428878 TRIM5Q9C035 493 aa12.71□□□□□ -0.37
HIPK2-203ENST00000428878 LMBRD1Q9NUN5 540 aa12.71□□□□□ -0.37
HIPK2-203ENST00000428878 FGFR2P21802 821 aa12.71□□□□□ -0.37
HIPK2-203ENST00000428878 TBC1D10BQ4KMP7 808 aaPredicted RBP12.71□□□□□ -0.37
HIPK2-203ENST00000428878 ZSCAN10Q96SZ4 725 aaPredicted RBP12.71□□□□□ -0.37
HIPK2-203ENST00000428878 ZNF287Q9HBT7 754 aa12.71□□□□□ -0.37
HIPK2-203ENST00000428878 HOMER2Q9NSB8 354 aa12.71□□□□□ -0.37
HIPK2-203ENST00000428878 SCN11AQ9UI33 1791 aa12.71□□□□□ -0.37
HIPK2-203ENST00000428878 AK9Q5TCS8 1911 aa12.71□□□□□ -0.38
HIPK2-203ENST00000428878 CDK11BP21127 795 aaKnown RBP12.71□□□□□ -0.38
HIPK2-203ENST00000428878 PIK3AP1Q6ZUJ8 805 aa12.71□□□□□ -0.38
HIPK2-203ENST00000428878 CPXCR1Q8N123 301 aa12.71□□□□□ -0.38
HIPK2-203ENST00000428878 SLIT2O94813 1529 aa12.71□□□□□ -0.38
HIPK2-203ENST00000428878 LIG1P18858 919 aa12.71□□□□□ -0.38
HIPK2-203ENST00000428878 CTR9Q6PD62 1173 aa12.71□□□□□ -0.38
HIPK2-203ENST00000428878 KCTD1Q719H9 257 aa12.71□□□□□ -0.38
HIPK2-203ENST00000428878 TTC6Q86TZ1 520 aa12.71□□□□□ -0.38
HIPK2-203ENST00000428878 PNMA1Q8ND90 353 aa12.71□□□□□ -0.38
HIPK2-203ENST00000428878 GPT2Q8TD30 523 aa12.71□□□□□ -0.38
HIPK2-203ENST00000428878 SCAND2PQ9GZW5 306 aaPredicted RBP12.71□□□□□ -0.38
HIPK2-203ENST00000428878 MYO1BO43795 1136 aa12.7□□□□□ -0.38
HIPK2-203ENST00000428878 TNNI2P48788 182 aa12.7□□□□□ -0.38
HIPK2-203ENST00000428878 FANCBQ8NB91 859 aa12.7□□□□□ -0.38
HIPK2-203ENST00000428878 CLIC6Q96NY7 704 aa12.7□□□□□ -0.38
HIPK2-203ENST00000428878 CDC25AP30304 524 aa12.7□□□□□ -0.38
HIPK2-203ENST00000428878 GUCY1A2P33402 732 aa12.7□□□□□ -0.38
HIPK2-203ENST00000428878 FCHSD1Q86WN1 690 aa12.7□□□□□ -0.38
HIPK2-203ENST00000428878 GAS2L3Q86XJ1 694 aa12.7□□□□□ -0.38
HIPK2-203ENST00000428878 ZNF830Q96NB3 372 aaPredicted RBP12.7□□□□□ -0.38
HIPK2-203ENST00000428878 HDAC9Q9UKV0 1011 aa12.7□□□□□ -0.38
HIPK2-203ENST00000428878 SRGNP10124 158 aa12.7□□□□□ -0.38
HIPK2-203ENST00000428878 ANTXR2P58335 489 aa12.69□□□□□ -0.38
HIPK2-203ENST00000428878 GPR162Q16538 588 aa12.69□□□□□ -0.38
HIPK2-203ENST00000428878 EAPPQ56P03 285 aaPredicted RBP12.69□□□□□ -0.38
HIPK2-203ENST00000428878 NKX2-3Q8TAU0 364 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms