RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 PATL2C9JE40 543 aaKnown RBP17.43■□□□□ 0.38
SGCE-204ENST00000428696 PLCD1P51178 756 aa17.43■□□□□ 0.38
SGCE-204ENST00000428696 FOXP4Q8IVH2 680 aaPredicted RBP17.43■□□□□ 0.38
SGCE-204ENST00000428696 CAPNS2Q96L46 248 aa17.43■□□□□ 0.38
SGCE-204ENST00000428696 RASSF10A6NK89 507 aa17.42■□□□□ 0.38
SGCE-204ENST00000428696 INPP5BP32019 993 aa17.42■□□□□ 0.38
SGCE-204ENST00000428696 ECE1P42892 770 aa17.42■□□□□ 0.38
SGCE-204ENST00000428696 VEGFBP49765 207 aa17.42■□□□□ 0.38
SGCE-204ENST00000428696 MFAP1P55081 439 aaKnown RBP17.42■□□□□ 0.38
SGCE-204ENST00000428696 LDLRAD1Q5T700 205 aa17.42■□□□□ 0.38
SGCE-204ENST00000428696 KLRG1Q96E93 195 aa17.42■□□□□ 0.38
SGCE-204ENST00000428696 SSC5DA1L4H1 1573 aa17.42■□□□□ 0.38
SGCE-204ENST00000428696 RPAP1Q9BWH6 1393 aaPredicted RBP17.41■□□□□ 0.38
SGCE-204ENST00000428696 TRPM7Q96QT4 1865 aa17.41■□□□□ 0.38
SGCE-204ENST00000428696 VGLL4Q14135 290 aa17.41■□□□□ 0.38
SGCE-204ENST00000428696 TICAM2Q86XR7 235 aa17.41■□□□□ 0.38
SGCE-204ENST00000428696 IFNL3Q8IZI9 196 aa17.41■□□□□ 0.38
SGCE-204ENST00000428696 RUFY2Q8WXA3 655 aa17.41■□□□□ 0.38
SGCE-204ENST00000428696 CCDC102AQ96A19 550 aa17.41■□□□□ 0.38
SGCE-204ENST00000428696 NAPBQ9H115 298 aa17.41■□□□□ 0.38
SGCE-204ENST00000428696 PICK1Q9NRD5 415 aa17.41■□□□□ 0.38
SGCE-204ENST00000428696 SERPINB13Q9UIV8 391 aa17.41■□□□□ 0.38
SGCE-204ENST00000428696 AOC2O75106 756 aa17.4■□□□□ 0.38
SGCE-204ENST00000428696 CHMLP26374 656 aa17.4■□□□□ 0.38
SGCE-204ENST00000428696 EVX2Q03828 476 aa17.4■□□□□ 0.38
SGCE-204ENST00000428696 VPS53Q5VIR6 699 aa17.4■□□□□ 0.38
SGCE-204ENST00000428696 CTR9Q6PD62 1173 aa17.4■□□□□ 0.38
SGCE-204ENST00000428696 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.4■□□□□ 0.38
SGCE-204ENST00000428696 ZNF589Q86UQ0 364 aaPredicted RBP17.4■□□□□ 0.38
SGCE-204ENST00000428696 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.4■□□□□ 0.38
SGCE-204ENST00000428696 HERC5Q9UII4 1024 aaKnown RBP17.4■□□□□ 0.38
SGCE-204ENST00000428696 GTF3C3Q9Y5Q9 886 aa17.4■□□□□ 0.38
SGCE-204ENST00000428696 WDR33Q9C0J8 1336 aaKnown RBP17.4■□□□□ 0.38
SGCE-204ENST00000428696 ATRNL1Q5VV63 1379 aa17.4■□□□□ 0.38
SGCE-204ENST00000428696 MAP3K11Q16584 847 aa17.39■□□□□ 0.38
SGCE-204ENST00000428696 BMP2KLQ5H9B9 411 aa17.39■□□□□ 0.38
SGCE-204ENST00000428696 DYNLL2Q96FJ2 89 aa17.39■□□□□ 0.38
SGCE-204ENST00000428696 OTUD5Q96G74 571 aa17.39■□□□□ 0.38
SGCE-204ENST00000428696 CCDC171Q6TFL3 1326 aa17.39■□□□□ 0.37
SGCE-204ENST00000428696 MPHOSPH10O00566 681 aaKnown RBP17.38■□□□□ 0.37
SGCE-204ENST00000428696 TBC1D12O60347 775 aa17.38■□□□□ 0.37
SGCE-204ENST00000428696 CASC1Q6TDU7 716 aa17.38■□□□□ 0.37
SGCE-204ENST00000428696 DNAJC5GQ8N7S2 189 aa17.38■□□□□ 0.37
SGCE-204ENST00000428696 CNKSR2Q8WXI2 1034 aa17.38■□□□□ 0.37
SGCE-204ENST00000428696 OPTNQ96CV9 577 aa17.38■□□□□ 0.37
SGCE-204ENST00000428696 HHIPL1Q96JK4 782 aa17.38■□□□□ 0.37
SGCE-204ENST00000428696 CEP350Q5VT06 3117 aa17.38■□□□□ 0.37
SGCE-204ENST00000428696 PHF20L1A8MW92 1017 aa17.38■□□□□ 0.37
SGCE-204ENST00000428696 SMIM22K7EJ46 135 aa17.38■□□□□ 0.37
SGCE-204ENST00000428696 GDF11O95390 407 aa17.38■□□□□ 0.37
SGCE-204ENST00000428696 C12orf60Q5U649 245 aa17.38■□□□□ 0.37
SGCE-204ENST00000428696 GIMAP6Q6P9H5 292 aa17.38■□□□□ 0.37
SGCE-204ENST00000428696 RASAL3Q86YV0 1011 aa17.38■□□□□ 0.37
SGCE-204ENST00000428696 SLC44A5Q8NCS7 719 aa17.38■□□□□ 0.37
SGCE-204ENST00000428696 EPB41L4AQ9HCS5 686 aaPredicted RBP17.38■□□□□ 0.37
SGCE-204ENST00000428696 ARPP21Q9UBL0 812 aaPredicted RBP17.38■□□□□ 0.37
SGCE-204ENST00000428696 ZNF112Q9UJU3 913 aa17.38■□□□□ 0.37
SGCE-204ENST00000428696 MYH7P12883 1935 aa17.38■□□□□ 0.37
SGCE-204ENST00000428696 PAPPA2Q9BXP8 1791 aa17.37■□□□□ 0.37
SGCE-204ENST00000428696 CTNND1O60716 968 aaKnown RBP17.37■□□□□ 0.37
SGCE-204ENST00000428696 HSPD1P10809 573 aaKnown RBP17.37■□□□□ 0.37
SGCE-204ENST00000428696 CERKLQ49MI3 558 aaPredicted RBP17.37■□□□□ 0.37
SGCE-204ENST00000428696 KIAA1211Q6ZU35 1233 aa17.37■□□□□ 0.37
SGCE-204ENST00000428696 MKNK2Q9HBH9 465 aa17.37■□□□□ 0.37
SGCE-204ENST00000428696 RNF216Q9NWF9 866 aaPredicted RBP17.37■□□□□ 0.37
SGCE-204ENST00000428696 SLC3A2P08195 630 aaKnown RBP17.36■□□□□ 0.37
SGCE-204ENST00000428696 SLC10A3P09131 477 aa17.36■□□□□ 0.37
SGCE-204ENST00000428696 KIF23Q02241 960 aaPredicted RBP17.36■□□□□ 0.37
SGCE-204ENST00000428696 MAP3K10Q02779 954 aa17.36■□□□□ 0.37
SGCE-204ENST00000428696 NOGQ13253 232 aa17.36■□□□□ 0.37
SGCE-204ENST00000428696 CCDC84Q86UT8 332 aaPredicted RBP17.36■□□□□ 0.37
SGCE-204ENST00000428696 SCYL3Q8IZE3 742 aa17.36■□□□□ 0.37
SGCE-204ENST00000428696 WNK4Q96J92 1243 aa17.36■□□□□ 0.37
SGCE-204ENST00000428696 EHD4Q9H223 541 aa17.36■□□□□ 0.37
SGCE-204ENST00000428696 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.36■□□□□ 0.37
SGCE-204ENST00000428696 SNCAIPQ9Y6H5 919 aa17.36■□□□□ 0.37
SGCE-204ENST00000428696 ZHX2Q9Y6X8 837 aa17.36■□□□□ 0.37
SGCE-204ENST00000428696 COL2A1P02458 1487 aaPredicted RBP17.36■□□□□ 0.37
SGCE-204ENST00000428696 UNCXA6NJT0 531 aa17.35■□□□□ 0.37
SGCE-204ENST00000428696 FGAP02671 866 aa17.35■□□□□ 0.37
SGCE-204ENST00000428696 CAP2P40123 477 aa17.35■□□□□ 0.37
SGCE-204ENST00000428696 CDK8P49336 464 aa17.35■□□□□ 0.37
SGCE-204ENST00000428696 RRP1BQ14684 758 aaKnown RBP17.35■□□□□ 0.37
SGCE-204ENST00000428696 RAB3GAP1Q15042 981 aa17.35■□□□□ 0.37
SGCE-204ENST00000428696 SPRYD7Q5W111 196 aa17.35■□□□□ 0.37
SGCE-204ENST00000428696 ERO1BQ86YB8 467 aa17.35■□□□□ 0.37
SGCE-204ENST00000428696 ZIC5Q96T25 663 aa17.35■□□□□ 0.37
SGCE-204ENST00000428696 DNAJC18Q9H819 358 aa17.35■□□□□ 0.37
SGCE-204ENST00000428696 CABP5Q9NP86 173 aa17.35■□□□□ 0.37
SGCE-204ENST00000428696 FAM155AB1AL88 458 aaPredicted RBP17.34■□□□□ 0.37
SGCE-204ENST00000428696 CDC45O75419 566 aa17.34■□□□□ 0.37
SGCE-204ENST00000428696 GH2P01242 217 aa17.34■□□□□ 0.37
SGCE-204ENST00000428696 HAND2P61296 217 aa17.34■□□□□ 0.37
SGCE-204ENST00000428696 CTDSPL2Q05D32 466 aa17.34■□□□□ 0.37
SGCE-204ENST00000428696 ABCB5Q2M3G0 1257 aa17.34■□□□□ 0.37
SGCE-204ENST00000428696 SHROOM1Q2M3G4 852 aaPredicted RBP17.34■□□□□ 0.37
SGCE-204ENST00000428696 SBK1Q52WX2 424 aa17.34■□□□□ 0.37
SGCE-204ENST00000428696 TOMM22Q9NS69 142 aa17.34■□□□□ 0.37
SGCE-204ENST00000428696 SWAP70Q9UH65 585 aa17.34■□□□□ 0.37
SGCE-204ENST00000428696 PRDM1O75626 825 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms