RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 NECAB1Q8N987 351 aa16.01■□□□□ 0.15
PTPN13-203ENST00000427191 PHF8Q9UPP1 1060 aa16.01■□□□□ 0.15
PTPN13-203ENST00000427191 PTPDC1A2A3K4 754 aa16.01■□□□□ 0.15
PTPN13-203ENST00000427191 VTI1AQ96AJ9 217 aa16.01■□□□□ 0.15
PTPN13-203ENST00000427191 CCDC124Q96CT7 223 aaKnown RBP16.01■□□□□ 0.15
PTPN13-203ENST00000427191 SKAP1Q86WV1 359 aa16.01■□□□□ 0.15
PTPN13-203ENST00000427191 ZBTB3Q9H5J0 574 aa16.01■□□□□ 0.15
PTPN13-203ENST00000427191 BAG5Q9UL15 447 aa16.01■□□□□ 0.15
PTPN13-203ENST00000427191 TPCN1Q9ULQ1 816 aa16.01■□□□□ 0.15
PTPN13-203ENST00000427191 EIF3CLB5ME19 914 aaKnown RBP16.01■□□□□ 0.15
PTPN13-203ENST00000427191 INPP1P49441 399 aa16.01■□□□□ 0.15
PTPN13-203ENST00000427191 PLCB4Q15147 1175 aa16.01■□□□□ 0.15
PTPN13-203ENST00000427191 RNF34Q969K3 372 aa16.01■□□□□ 0.15
PTPN13-203ENST00000427191 FAM212AQ96EL1 285 aa16.01■□□□□ 0.15
PTPN13-203ENST00000427191 EIF3CQ99613 913 aaKnown RBP16.01■□□□□ 0.15
PTPN13-203ENST00000427191 ERCC3P19447 782 aa16.01■□□□□ 0.15
PTPN13-203ENST00000427191 KRT15P19012 456 aa16■□□□□ 0.15
PTPN13-203ENST00000427191 C20orf194Q5TEA3 1177 aa16■□□□□ 0.15
PTPN13-203ENST00000427191 MCTP2Q6DN12 878 aa16■□□□□ 0.15
PTPN13-203ENST00000427191 KSR2Q6VAB6 950 aa16■□□□□ 0.15
PTPN13-203ENST00000427191 TRIM58Q8NG06 486 aa16■□□□□ 0.15
PTPN13-203ENST00000427191 AFG3L2Q9Y4W6 797 aa16■□□□□ 0.15
PTPN13-203ENST00000427191 THOC2Q8NI27 1593 aaKnown RBP16■□□□□ 0.15
PTPN13-203ENST00000427191 RPS6KA2Q15349 733 aa16■□□□□ 0.15
PTPN13-203ENST00000427191 BBOF1Q8ND07 529 aa16■□□□□ 0.15
PTPN13-203ENST00000427191 EYA3Q99504 573 aa16■□□□□ 0.15
PTPN13-203ENST00000427191 ZNF219Q9P2Y4 722 aaPredicted RBP16■□□□□ 0.15
PTPN13-203ENST00000427191 TTC16Q8NEE8 873 aa16■□□□□ 0.15
PTPN13-203ENST00000427191 EPS15L1Q9UBC2 864 aa16■□□□□ 0.15
PTPN13-203ENST00000427191 BACH1O14867 736 aa16■□□□□ 0.15
PTPN13-203ENST00000427191 GPTP24298 496 aa16■□□□□ 0.15
PTPN13-203ENST00000427191 CREB3L3Q68CJ9 461 aa16■□□□□ 0.15
PTPN13-203ENST00000427191 GABPAQ06546 454 aa16■□□□□ 0.15
PTPN13-203ENST00000427191 HACE1Q8IYU2 909 aa16■□□□□ 0.15
PTPN13-203ENST00000427191 HSP90AA4PQ58FG1 418 aa16■□□□□ 0.15
PTPN13-203ENST00000427191 TTC6Q86TZ1 520 aa16■□□□□ 0.15
PTPN13-203ENST00000427191 RPS6KA1Q15418 735 aa15.99■□□□□ 0.15
PTPN13-203ENST00000427191 TRMT1LQ7Z2T5 733 aaKnown RBP15.99■□□□□ 0.15
PTPN13-203ENST00000427191 FAM8A1Q9UBU6 413 aa15.99■□□□□ 0.15
PTPN13-203ENST00000427191 RGS16O15492 202 aaPredicted RBP15.99■□□□□ 0.15
PTPN13-203ENST00000427191 COG7P83436 770 aa15.99■□□□□ 0.15
PTPN13-203ENST00000427191 DCUN1D2Q6PH85 259 aa15.99■□□□□ 0.15
PTPN13-203ENST00000427191 CARD10Q9BWT7 1032 aa15.99■□□□□ 0.15
PTPN13-203ENST00000427191 SNRKQ9NRH2 765 aa15.99■□□□□ 0.15
PTPN13-203ENST00000427191 MAST3O60307 1309 aa15.99■□□□□ 0.15
PTPN13-203ENST00000427191 RILPQ96NA2 401 aa15.99■□□□□ 0.15
PTPN13-203ENST00000427191 PSDA5PKW4 1024 aaPredicted RBP15.99■□□□□ 0.15
PTPN13-203ENST00000427191 TOM1O60784 492 aa15.99■□□□□ 0.15
PTPN13-203ENST00000427191 PDZD4Q76G19 769 aaPredicted RBP15.99■□□□□ 0.15
PTPN13-203ENST00000427191 PNMA8AQ86V59 439 aaPredicted RBP15.99■□□□□ 0.15
PTPN13-203ENST00000427191 CD109Q6YHK3 1445 aa15.99■□□□□ 0.15
PTPN13-203ENST00000427191 MAN1A1P33908 653 aa15.98■□□□□ 0.15
PTPN13-203ENST00000427191 ADGRL1O94910 1474 aa15.98■□□□□ 0.15
PTPN13-203ENST00000427191 GOLGA5Q8TBA6 731 aa15.98■□□□□ 0.15
PTPN13-203ENST00000427191 ARHGEF10LQ9HCE6 1279 aa15.98■□□□□ 0.15
PTPN13-203ENST00000427191 IPO11Q9UI26 975 aaKnown RBP15.98■□□□□ 0.15
PTPN13-203ENST00000427191 UBAP1LF5GYI3 381 aa15.98■□□□□ 0.15
PTPN13-203ENST00000427191 PEX26Q7Z412 305 aa15.98■□□□□ 0.15
PTPN13-203ENST00000427191 CSGALNACT2Q8N6G5 542 aa15.98■□□□□ 0.15
PTPN13-203ENST00000427191 PSPC1Q8WXF1 523 aaKnown RBP15.98■□□□□ 0.15
PTPN13-203ENST00000427191 KDM3AQ9Y4C1 1321 aa15.98■□□□□ 0.15
PTPN13-203ENST00000427191 STX2P32856 288 aa15.98■□□□□ 0.15
PTPN13-203ENST00000427191 WHAMMQ8TF30 809 aa15.98■□□□□ 0.15
PTPN13-203ENST00000427191 RIC8AQ9NPQ8 531 aa15.98■□□□□ 0.15
PTPN13-203ENST00000427191 KCNH3Q9ULD8 1083 aa15.98■□□□□ 0.15
PTPN13-203ENST00000427191 ORC6Q9Y5N6 252 aa15.98■□□□□ 0.15
PTPN13-203ENST00000427191 TXNDC9O14530 226 aa15.98■□□□□ 0.15
PTPN13-203ENST00000427191 PDE1CQ14123 709 aaPredicted RBP15.98■□□□□ 0.15
PTPN13-203ENST00000427191 PLS1Q14651 629 aa15.98■□□□□ 0.15
PTPN13-203ENST00000427191 CCDC105Q8IYK2 499 aa15.98■□□□□ 0.15
PTPN13-203ENST00000427191 KMT5BQ4FZB7 885 aa15.98■□□□□ 0.15
PTPN13-203ENST00000427191 PRXQ9BXM0 1461 aa15.97■□□□□ 0.15
PTPN13-203ENST00000427191 N4BP1O75113 896 aaKnown RBP15.97■□□□□ 0.15
PTPN13-203ENST00000427191 CCDC93Q567U6 631 aa15.97■□□□□ 0.15
PTPN13-203ENST00000427191 HMGXB3Q12766 1538 aa15.97■□□□□ 0.15
PTPN13-203ENST00000427191 AK2P54819 239 aa15.97■□□□□ 0.15
PTPN13-203ENST00000427191 LARP6Q9BRS8 491 aaKnown RBP15.97■□□□□ 0.15
PTPN13-203ENST00000427191 IBTKQ9P2D0 1353 aaPredicted RBP15.97■□□□□ 0.15
PTPN13-203ENST00000427191 SFMBT2Q5VUG0 894 aa15.97■□□□□ 0.15
PTPN13-203ENST00000427191 TRIML1Q8N9V2 468 aa15.97■□□□□ 0.15
PTPN13-203ENST00000427191 FAM71BQ8TC56 605 aa15.97■□□□□ 0.15
PTPN13-203ENST00000427191 MCM9Q9NXL9 1143 aa15.97■□□□□ 0.15
PTPN13-203ENST00000427191 A0A1B0GVL5 298 aa15.97■□□□□ 0.15
PTPN13-203ENST00000427191 VWA3AA6NCI4 1184 aa15.97■□□□□ 0.15
PTPN13-203ENST00000427191 NMIQ13287 307 aaPredicted RBP15.97■□□□□ 0.15
PTPN13-203ENST00000427191 PSMD6Q15008 389 aa15.97■□□□□ 0.15
PTPN13-203ENST00000427191 ARMC9Q7Z3E5 817 aa15.97■□□□□ 0.15
PTPN13-203ENST00000427191 MYCBPQ99417 103 aaPredicted RBP15.97■□□□□ 0.15
PTPN13-203ENST00000427191 PDE4DQ08499 809 aa15.97■□□□□ 0.15
PTPN13-203ENST00000427191 LDHBP07195 334 aaKnown RBP15.97■□□□□ 0.15
PTPN13-203ENST00000427191 RBBP5Q15291 538 aaKnown RBP15.97■□□□□ 0.15
PTPN13-203ENST00000427191 NT5C3AQ9H0P0 336 aa15.96■□□□□ 0.15
PTPN13-203ENST00000427191 CLSTN2Q9H4D0 955 aa15.96■□□□□ 0.15
PTPN13-203ENST00000427191 TBC1D8O95759 1140 aa15.96■□□□□ 0.15
PTPN13-203ENST00000427191 KRT12Q99456 494 aa15.96■□□□□ 0.15
PTPN13-203ENST00000427191 CSRNP1Q96S65 589 aa15.96■□□□□ 0.15
PTPN13-203ENST00000427191 ANKRD20A4Q4UJ75 823 aa15.96■□□□□ 0.15
PTPN13-203ENST00000427191 ANKRD20A8PQ5CZ79 823 aa15.96■□□□□ 0.15
PTPN13-203ENST00000427191 ANKRD20A2Q5SQ80 823 aa15.96■□□□□ 0.15
PTPN13-203ENST00000427191 ANKRD20A1Q5TYW2 823 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms