RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 TBC1D2Q9BYX2 928 aa18.16■□□□□ 0.5
PDAP1-202ENST00000426447 GJD2Q9UKL4 321 aa18.16■□□□□ 0.5
PDAP1-202ENST00000426447 GPR75-ASB3A0A0A6YYF3 556 aa18.15■□□□□ 0.5
PDAP1-202ENST00000426447 LDHCP07864 332 aa18.15■□□□□ 0.5
PDAP1-202ENST00000426447 ASCC2Q9H1I8 757 aaPredicted RBP18.15■□□□□ 0.5
PDAP1-202ENST00000426447 AS3MTQ9HBK9 375 aa18.15■□□□□ 0.5
PDAP1-202ENST00000426447 RFX7Q2KHR2 1363 aa18.15■□□□□ 0.5
PDAP1-202ENST00000426447 USP17L5A8MUK1 530 aa18.14■□□□□ 0.49
PDAP1-202ENST00000426447 E9PSI1 815 aa18.14■□□□□ 0.49
PDAP1-202ENST00000426447 ZBTB22O15209 634 aa18.14■□□□□ 0.49
PDAP1-202ENST00000426447 CYP2B6P20813 491 aa18.14■□□□□ 0.49
PDAP1-202ENST00000426447 MAGEA10P43363 369 aaPredicted RBP18.14■□□□□ 0.49
PDAP1-202ENST00000426447 GSTO1P78417 241 aa18.14■□□□□ 0.49
PDAP1-202ENST00000426447 LRIT3Q3SXY7 679 aa18.14■□□□□ 0.49
PDAP1-202ENST00000426447 Q7L0L9 218 aa18.14■□□□□ 0.49
PDAP1-202ENST00000426447 UBE2OQ9C0C9 1292 aaKnown RBP18.14■□□□□ 0.49
PDAP1-202ENST00000426447 SMC4Q9NTJ3 1288 aa18.14■□□□□ 0.49
PDAP1-202ENST00000426447 AKAP2Q9Y2D5 859 aa18.14■□□□□ 0.49
PDAP1-202ENST00000426447 DOCK2Q92608 1830 aa18.14■□□□□ 0.49
PDAP1-202ENST00000426447 NPM3O75607 178 aaKnown RBP18.13■□□□□ 0.49
PDAP1-202ENST00000426447 CAP2P40123 477 aa18.13■□□□□ 0.49
PDAP1-202ENST00000426447 RHBDL3P58872 404 aa18.13■□□□□ 0.49
PDAP1-202ENST00000426447 IRX3P78415 501 aaPredicted RBP18.13■□□□□ 0.49
PDAP1-202ENST00000426447 MVPQ14764 893 aaKnown RBP18.13■□□□□ 0.49
PDAP1-202ENST00000426447 ALDH1L2Q3SY69 923 aa18.13■□□□□ 0.49
PDAP1-202ENST00000426447 TDHQ8IZJ6 230 aa18.13■□□□□ 0.49
PDAP1-202ENST00000426447 XAGE2Q96GT9 111 aa18.13■□□□□ 0.49
PDAP1-202ENST00000426447 NEUROD6Q96NK8 337 aa18.13■□□□□ 0.49
PDAP1-202ENST00000426447 COPRSQ9NQ92 184 aa18.13■□□□□ 0.49
PDAP1-202ENST00000426447 PDS5AQ29RF7 1337 aaKnown RBP18.13■□□□□ 0.49
PDAP1-202ENST00000426447 ZNF521Q96K83 1311 aa18.13■□□□□ 0.49
PDAP1-202ENST00000426447 A0A1B0GUL7 405 aa18.12■□□□□ 0.49
PDAP1-202ENST00000426447 MAP4K4O95819 1239 aaPredicted RBP18.12■□□□□ 0.49
PDAP1-202ENST00000426447 GORABQ5T7V8 394 aa18.12■□□□□ 0.49
PDAP1-202ENST00000426447 CCAR1Q8IX12 1150 aaKnown RBP18.12■□□□□ 0.49
PDAP1-202ENST00000426447 TRIB2Q92519 343 aa18.12■□□□□ 0.49
PDAP1-202ENST00000426447 NUDT12Q9BQG2 462 aa18.12■□□□□ 0.49
PDAP1-202ENST00000426447 TMOD4Q9NZQ9 345 aa18.12■□□□□ 0.49
PDAP1-202ENST00000426447 RAI14Q9P0K7 980 aa18.12■□□□□ 0.49
PDAP1-202ENST00000426447 OGDHLQ9ULD0 1010 aa18.12■□□□□ 0.49
PDAP1-202ENST00000426447 STXBP5LQ9Y2K9 1186 aa18.12■□□□□ 0.49
PDAP1-202ENST00000426447 MYH2Q9UKX2 1941 aa18.11■□□□□ 0.49
PDAP1-202ENST00000426447 PRKAR2AP13861 404 aaKnown RBP18.11■□□□□ 0.49
PDAP1-202ENST00000426447 TFCP2Q12800 502 aa18.11■□□□□ 0.49
PDAP1-202ENST00000426447 SH3D19Q5HYK7 790 aa18.11■□□□□ 0.49
PDAP1-202ENST00000426447 MORF4L1Q9UBU8 362 aa18.11■□□□□ 0.49
PDAP1-202ENST00000426447 DOCK1Q14185 1865 aa18.11■□□□□ 0.49
PDAP1-202ENST00000426447 PDE3AQ14432 1141 aa18.1■□□□□ 0.49
PDAP1-202ENST00000426447 TBC1D9Q6ZT07 1266 aa18.1■□□□□ 0.49
PDAP1-202ENST00000426447 TEX11Q8IYF3 940 aa18.1■□□□□ 0.49
PDAP1-202ENST00000426447 GPRC5AQ8NFJ5 357 aa18.1■□□□□ 0.49
PDAP1-202ENST00000426447 P2RX7Q99572 595 aaKnown RBP18.1■□□□□ 0.49
PDAP1-202ENST00000426447 NOL10Q9BSC4 688 aaKnown RBP18.1■□□□□ 0.49
PDAP1-202ENST00000426447 MTMR10Q9NXD2 777 aa18.1■□□□□ 0.49
PDAP1-202ENST00000426447 HERC5Q9UII4 1024 aaKnown RBP18.1■□□□□ 0.49
PDAP1-202ENST00000426447 MTMR2Q13614 643 aa18.09■□□□□ 0.49
PDAP1-202ENST00000426447 RRP1BQ14684 758 aaKnown RBP18.09■□□□□ 0.49
PDAP1-202ENST00000426447 TRMT44Q8IYL2 757 aaKnown RBP18.09■□□□□ 0.49
PDAP1-202ENST00000426447 SPATA5Q8NB90 893 aa18.09■□□□□ 0.49
PDAP1-202ENST00000426447 NSUN4Q96CB9 384 aaKnown RBP18.09■□□□□ 0.49
PDAP1-202ENST00000426447 HMG20BQ9P0W2 317 aa18.09■□□□□ 0.49
PDAP1-202ENST00000426447 PI4KBQ9UBF8 816 aa18.09■□□□□ 0.49
PDAP1-202ENST00000426447 NOB1Q9ULX3 412 aaKnown RBP18.09■□□□□ 0.49
PDAP1-202ENST00000426447 XRCC5P13010 732 aaKnown RBP18.08■□□□□ 0.48
PDAP1-202ENST00000426447 ZKSCAN1P17029 563 aaPredicted RBP18.08■□□□□ 0.48
PDAP1-202ENST00000426447 BACE1P56817 501 aa18.08■□□□□ 0.48
PDAP1-202ENST00000426447 SLFN5Q08AF3 891 aa18.08■□□□□ 0.48
PDAP1-202ENST00000426447 ZNF384Q8TF68 577 aa18.08■□□□□ 0.48
PDAP1-202ENST00000426447 SOCS4Q8WXH5 440 aa18.08■□□□□ 0.48
PDAP1-202ENST00000426447 WDR18Q9BV38 432 aa18.08■□□□□ 0.48
PDAP1-202ENST00000426447 TRIM34Q9BYJ4 488 aa18.08■□□□□ 0.48
PDAP1-202ENST00000426447 API5Q9BZZ5 524 aaKnown RBP18.08■□□□□ 0.48
PDAP1-202ENST00000426447 CWC22Q9HCG8 908 aaKnown RBP18.08■□□□□ 0.48
PDAP1-202ENST00000426447 LRP2BPQ9P2M1 347 aa18.08■□□□□ 0.48
PDAP1-202ENST00000426447 PHIPQ8WWQ0 1821 aa18.07■□□□□ 0.48
PDAP1-202ENST00000426447 SRGAP3O43295 1099 aa18.07■□□□□ 0.48
PDAP1-202ENST00000426447 PEX10O60683 326 aa18.07■□□□□ 0.48
PDAP1-202ENST00000426447 ASNSP08243 561 aa18.07■□□□□ 0.48
PDAP1-202ENST00000426447 MAPK4P31152 587 aa18.07■□□□□ 0.48
PDAP1-202ENST00000426447 HOXA7P31268 230 aaPredicted RBP18.07■□□□□ 0.48
PDAP1-202ENST00000426447 MAP3K21Q5TCX8 1036 aa18.07■□□□□ 0.48
PDAP1-202ENST00000426447 DHX36Q9H2U1 1008 aaKnown RBP18.07■□□□□ 0.48
PDAP1-202ENST00000426447 PTPRFP10586 1907 aa18.07■□□□□ 0.48
PDAP1-202ENST00000426447 PFASO15067 1338 aa18.06■□□□□ 0.48
PDAP1-202ENST00000426447 C19orf81C9J6K1 198 aa18.06■□□□□ 0.48
PDAP1-202ENST00000426447 BAG3O95817 575 aa18.06■□□□□ 0.48
PDAP1-202ENST00000426447 HERVK_113P62684 666 aa18.06■□□□□ 0.48
PDAP1-202ENST00000426447 MDM2Q00987 491 aaPredicted RBP18.06■□□□□ 0.48
PDAP1-202ENST00000426447 CACNB2Q08289 660 aaPredicted RBP18.06■□□□□ 0.48
PDAP1-202ENST00000426447 PI16Q6UXB8 463 aa18.06■□□□□ 0.48
PDAP1-202ENST00000426447 CRACR2BQ8N4Y2 399 aaPredicted RBP18.06■□□□□ 0.48
PDAP1-202ENST00000426447 SH3RF3Q8TEJ3 882 aaPredicted RBP18.06■□□□□ 0.48
PDAP1-202ENST00000426447 MEIS3Q99687 375 aa18.06■□□□□ 0.48
PDAP1-202ENST00000426447 TXNRD2Q9NNW7 524 aa18.06■□□□□ 0.48
PDAP1-202ENST00000426447 DOCK3Q8IZD9 2030 aa18.06■□□□□ 0.48
PDAP1-202ENST00000426447 USP17L10C9JJH3 530 aa18.05■□□□□ 0.48
PDAP1-202ENST00000426447 RGS2P41220 211 aa18.05■□□□□ 0.48
PDAP1-202ENST00000426447 PAGR1Q9BTK6 254 aa18.05■□□□□ 0.48
PDAP1-202ENST00000426447 RBPJLQ9UBG7 517 aa18.05■□□□□ 0.48
PDAP1-202ENST00000426447 ALPK3Q96L96 1907 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms