RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 SOCS4Q8WXH5 440 aa17.71■□□□□ 0.43
HDAC6-206ENST00000426196 LBHD1Q9BQE6 289 aaPredicted RBP17.71■□□□□ 0.43
HDAC6-206ENST00000426196 TBC1D2Q9BYX2 928 aa17.71■□□□□ 0.43
HDAC6-206ENST00000426196 DENND2AQ9ULE3 1009 aa17.71■□□□□ 0.43
HDAC6-206ENST00000426196 EYA2O00167 538 aa17.7■□□□□ 0.42
HDAC6-206ENST00000426196 COL6A1P12109 1028 aa17.7■□□□□ 0.42
HDAC6-206ENST00000426196 CYP2B6P20813 491 aa17.7■□□□□ 0.42
HDAC6-206ENST00000426196 SPP2Q13103 211 aa17.7■□□□□ 0.42
HDAC6-206ENST00000426196 PICALMQ13492 652 aa17.7■□□□□ 0.42
HDAC6-206ENST00000426196 LRRC26Q2I0M4 334 aa17.7■□□□□ 0.42
HDAC6-206ENST00000426196 DZIP1Q86YF9 867 aaKnown RBP17.7■□□□□ 0.42
HDAC6-206ENST00000426196 SLF2Q8IX21 1173 aa17.7■□□□□ 0.42
HDAC6-206ENST00000426196 TRMT44Q8IYL2 757 aaKnown RBP17.7■□□□□ 0.42
HDAC6-206ENST00000426196 ZNF280CQ8ND82 737 aa17.7■□□□□ 0.42
HDAC6-206ENST00000426196 NUDT12Q9BQG2 462 aa17.7■□□□□ 0.42
HDAC6-206ENST00000426196 ASCC2Q9H1I8 757 aaPredicted RBP17.7■□□□□ 0.42
HDAC6-206ENST00000426196 PRDM6Q9NQX0 595 aa17.7■□□□□ 0.42
HDAC6-206ENST00000426196 FRMPD3Q5JV73 1810 aa17.7■□□□□ 0.42
HDAC6-206ENST00000426196 GAKO14976 1311 aa17.7■□□□□ 0.42
HDAC6-206ENST00000426196 SEMA3EO15041 775 aa17.69■□□□□ 0.42
HDAC6-206ENST00000426196 SLURP2P0DP57 97 aa17.69■□□□□ 0.42
HDAC6-206ENST00000426196 XRCC5P13010 732 aaKnown RBP17.69■□□□□ 0.42
HDAC6-206ENST00000426196 HMGCS2P54868 508 aa17.69■□□□□ 0.42
HDAC6-206ENST00000426196 OSBPL5Q9H0X9 879 aaPredicted RBP17.69■□□□□ 0.42
HDAC6-206ENST00000426196 DDX4Q9NQI0 724 aaKnown RBP17.69■□□□□ 0.42
HDAC6-206ENST00000426196 MAST2Q6P0Q8 1798 aa17.68■□□□□ 0.42
HDAC6-206ENST00000426196 TBC1D12O60347 775 aa17.68■□□□□ 0.42
HDAC6-206ENST00000426196 ZKSCAN1P17029 563 aaPredicted RBP17.68■□□□□ 0.42
HDAC6-206ENST00000426196 IRX3P78415 501 aaPredicted RBP17.68■□□□□ 0.42
HDAC6-206ENST00000426196 PDE3AQ14432 1141 aa17.68■□□□□ 0.42
HDAC6-206ENST00000426196 ATP2B3Q16720 1220 aa17.68■□□□□ 0.42
HDAC6-206ENST00000426196 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.68■□□□□ 0.42
HDAC6-206ENST00000426196 MORF4L1Q9UBU8 362 aa17.68■□□□□ 0.42
HDAC6-206ENST00000426196 SALL2Q9Y467 1007 aaPredicted RBP17.68■□□□□ 0.42
HDAC6-206ENST00000426196 MAFAQ8NHW3 353 aaPredicted RBP17.67■□□□□ 0.42
HDAC6-206ENST00000426196 BTDP43251 543 aa17.66■□□□□ 0.42
HDAC6-206ENST00000426196 CACNB2Q08289 660 aaPredicted RBP17.66■□□□□ 0.42
HDAC6-206ENST00000426196 AS3MTQ9HBK9 375 aa17.66■□□□□ 0.42
HDAC6-206ENST00000426196 FAM196BA6NMK8 535 aa17.65■□□□□ 0.42
HDAC6-206ENST00000426196 USP17L5A8MUK1 530 aa17.65■□□□□ 0.42
HDAC6-206ENST00000426196 PHKA1P46020 1223 aa17.65■□□□□ 0.42
HDAC6-206ENST00000426196 CCAR1Q8IX12 1150 aaKnown RBP17.65■□□□□ 0.42
HDAC6-206ENST00000426196 FAM163AQ96GL9 167 aaPredicted RBP17.65■□□□□ 0.42
HDAC6-206ENST00000426196 CDX2Q99626 313 aaPredicted RBP17.65■□□□□ 0.42
HDAC6-206ENST00000426196 CEP126Q9P2H0 1117 aa17.65■□□□□ 0.42
HDAC6-206ENST00000426196 ABCF2Q9UG63 623 aa17.65■□□□□ 0.42
HDAC6-206ENST00000426196 PRKAG2Q9UGJ0 569 aa17.65■□□□□ 0.42
HDAC6-206ENST00000426196 LTBP2Q14767 1821 aa17.64■□□□□ 0.41
HDAC6-206ENST00000426196 CCND3P30281 292 aaPredicted RBP17.64■□□□□ 0.41
HDAC6-206ENST00000426196 MAPK4P31152 587 aa17.64■□□□□ 0.41
HDAC6-206ENST00000426196 RFX5P48382 616 aaPredicted RBP17.64■□□□□ 0.41
HDAC6-206ENST00000426196 SH3D19Q5HYK7 790 aa17.64■□□□□ 0.41
HDAC6-206ENST00000426196 SPTY2D1Q68D10 685 aaPredicted RBP17.64■□□□□ 0.41
HDAC6-206ENST00000426196 ATG9AQ7Z3C6 839 aa17.64■□□□□ 0.41
HDAC6-206ENST00000426196 GPRC5AQ8NFJ5 357 aa17.64■□□□□ 0.41
HDAC6-206ENST00000426196 MROH7-TTC4A0A0A0MT08 1334 aa17.64■□□□□ 0.41
HDAC6-206ENST00000426196 NPM3O75607 178 aaKnown RBP17.63■□□□□ 0.41
HDAC6-206ENST00000426196 CAP2P40123 477 aa17.63■□□□□ 0.41
HDAC6-206ENST00000426196 RGS2P41220 211 aa17.63■□□□□ 0.41
HDAC6-206ENST00000426196 CCDC184Q52MB2 194 aa17.63■□□□□ 0.41
HDAC6-206ENST00000426196 LHX8Q68G74 356 aa17.63■□□□□ 0.41
HDAC6-206ENST00000426196 SYMPKQ92797 1274 aaKnown RBP17.63■□□□□ 0.41
HDAC6-206ENST00000426196 APBA2Q99767 749 aa17.63■□□□□ 0.41
HDAC6-206ENST00000426196 SENP6Q9GZR1 1112 aaPredicted RBP17.63■□□□□ 0.41
HDAC6-206ENST00000426196 SIL1Q9H173 461 aa17.63■□□□□ 0.41
HDAC6-206ENST00000426196 TMOD4Q9NZQ9 345 aa17.63■□□□□ 0.41
HDAC6-206ENST00000426196 FBXO3Q9UK99 471 aa17.63■□□□□ 0.41
HDAC6-206ENST00000426196 ZBTB22O15209 634 aa17.62■□□□□ 0.41
HDAC6-206ENST00000426196 HERVK_113P62684 666 aa17.62■□□□□ 0.41
HDAC6-206ENST00000426196 USP44Q9H0E7 712 aa17.62■□□□□ 0.41
HDAC6-206ENST00000426196 CIAO1O76071 339 aa17.61■□□□□ 0.41
HDAC6-206ENST00000426196 HOXA7P31268 230 aaPredicted RBP17.61■□□□□ 0.41
HDAC6-206ENST00000426196 RHBDL3P58872 404 aa17.61■□□□□ 0.41
HDAC6-206ENST00000426196 MTMR2Q13614 643 aa17.61■□□□□ 0.41
HDAC6-206ENST00000426196 CCDC102BQ68D86 513 aa17.61■□□□□ 0.41
HDAC6-206ENST00000426196 P2RX7Q99572 595 aaKnown RBP17.61■□□□□ 0.41
HDAC6-206ENST00000426196 SEMA6BQ9H3T3 888 aa17.61■□□□□ 0.41
HDAC6-206ENST00000426196 CWC22Q9HCG8 908 aaKnown RBP17.61■□□□□ 0.41
HDAC6-206ENST00000426196 TXNRD2Q9NNW7 524 aa17.61■□□□□ 0.41
HDAC6-206ENST00000426196 PTPRCP08575 1304 aa17.61■□□□□ 0.41
HDAC6-206ENST00000426196 PDS5AQ29RF7 1337 aaKnown RBP17.61■□□□□ 0.41
HDAC6-206ENST00000426196 NCOR1O75376 2440 aa17.6■□□□□ 0.41
HDAC6-206ENST00000426196 GPR75-ASB3A0A0A6YYF3 556 aa17.6■□□□□ 0.41
HDAC6-206ENST00000426196 MAP4K4O95819 1239 aaPredicted RBP17.6■□□□□ 0.41
HDAC6-206ENST00000426196 BACE1P56817 501 aa17.6■□□□□ 0.41
HDAC6-206ENST00000426196 ERVK-9P63128 1117 aa17.6■□□□□ 0.41
HDAC6-206ENST00000426196 ERVK-24P63145 666 aa17.6■□□□□ 0.41
HDAC6-206ENST00000426196 RASGRF1Q13972 1273 aa17.6■□□□□ 0.41
HDAC6-206ENST00000426196 CCL14Q16627 93 aa17.6■□□□□ 0.41
HDAC6-206ENST00000426196 GPR142Q7Z601 462 aa17.6■□□□□ 0.41
HDAC6-206ENST00000426196 GTF3C2Q8WUA4 911 aaPredicted RBP17.6■□□□□ 0.41
HDAC6-206ENST00000426196 USP6NLQ92738 828 aa17.6■□□□□ 0.41
HDAC6-206ENST00000426196 HERC5Q9UII4 1024 aaKnown RBP17.6■□□□□ 0.41
HDAC6-206ENST00000426196 ATN1P54259 1190 aaPredicted RBP17.59■□□□□ 0.41
HDAC6-206ENST00000426196 MORN1Q5T089 497 aa17.59■□□□□ 0.41
HDAC6-206ENST00000426196 MFSD14CQ5VZR4 134 aa17.59■□□□□ 0.41
HDAC6-206ENST00000426196 ERICH6Q7L0X2 663 aa17.59■□□□□ 0.41
HDAC6-206ENST00000426196 PLEKHH3Q7Z736 793 aa17.59■□□□□ 0.41
HDAC6-206ENST00000426196 MYLIPQ8WY64 445 aa17.59■□□□□ 0.41
HDAC6-206ENST00000426196 WDR18Q9BV38 432 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms