RNA–Protein interactions for RNA: ENST00000424964.6

TMEM248-204, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-204ENST00000424964 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.78■□□□□ 0.44
TMEM248-204ENST00000424964 RASAL3Q86YV0 1011 aa17.78■□□□□ 0.44
TMEM248-204ENST00000424964 ZKSCAN4Q969J2 545 aaPredicted RBP17.78■□□□□ 0.44
TMEM248-204ENST00000424964 FAM227BQ96M60 508 aa17.78■□□□□ 0.44
TMEM248-204ENST00000424964 ELP3Q9H9T3 547 aa17.78■□□□□ 0.44
TMEM248-204ENST00000424964 HELLSQ9NRZ9 838 aa17.78■□□□□ 0.44
TMEM248-204ENST00000424964 DIAPH3Q9NSV4 1193 aa17.78■□□□□ 0.44
TMEM248-204ENST00000424964 HERC5Q9UII4 1024 aaKnown RBP17.78■□□□□ 0.44
TMEM248-204ENST00000424964 BAZ2AQ9UIF9 1905 aaKnown RBP17.78■□□□□ 0.44
TMEM248-204ENST00000424964 HIP1O00291 1037 aa17.77■□□□□ 0.44
TMEM248-204ENST00000424964 AOC2O75106 756 aa17.77■□□□□ 0.44
TMEM248-204ENST00000424964 SLC10A3P09131 477 aa17.77■□□□□ 0.44
TMEM248-204ENST00000424964 MKRN3Q13064 507 aaKnown RBP17.77■□□□□ 0.44
TMEM248-204ENST00000424964 MCMDC2Q4G0Z9 681 aa17.77■□□□□ 0.44
TMEM248-204ENST00000424964 CCDC129Q6ZRS4 1044 aa17.77■□□□□ 0.44
TMEM248-204ENST00000424964 AMOTL1Q8IY63 956 aa17.77■□□□□ 0.44
TMEM248-204ENST00000424964 ZNF112Q9UJU3 913 aa17.77■□□□□ 0.44
TMEM248-204ENST00000424964 A0A0D9SFI3 127 aa17.76■□□□□ 0.43
TMEM248-204ENST00000424964 GSG1L2A8MUP6 293 aa17.76■□□□□ 0.43
TMEM248-204ENST00000424964 FAM155AB1AL88 458 aaPredicted RBP17.76■□□□□ 0.43
TMEM248-204ENST00000424964 PATL2C9JE40 543 aaKnown RBP17.76■□□□□ 0.43
TMEM248-204ENST00000424964 PLCD1P51178 756 aa17.76■□□□□ 0.43
TMEM248-204ENST00000424964 NOGQ13253 232 aa17.76■□□□□ 0.43
TMEM248-204ENST00000424964 OTOFQ9HC10 1997 aa17.76■□□□□ 0.43
TMEM248-204ENST00000424964 PHF20L1A8MW92 1017 aa17.75■□□□□ 0.43
TMEM248-204ENST00000424964 USP17L12C9JPN9 530 aa17.75■□□□□ 0.43
TMEM248-204ENST00000424964 USP17L21D6R901 530 aa17.75■□□□□ 0.43
TMEM248-204ENST00000424964 CYP2D6P10635 497 aa17.75■□□□□ 0.43
TMEM248-204ENST00000424964 CWC27Q6UX04 472 aaKnown RBP17.75■□□□□ 0.43
TMEM248-204ENST00000424964 WNK4Q96J92 1243 aa17.75■□□□□ 0.43
TMEM248-204ENST00000424964 NACAP1Q9BZK3 213 aa17.75■□□□□ 0.43
TMEM248-204ENST00000424964 SERPINB13Q9UIV8 391 aa17.75■□□□□ 0.43
TMEM248-204ENST00000424964 MAP2K2P36507 400 aa17.74■□□□□ 0.43
TMEM248-204ENST00000424964 TDO2P48775 406 aa17.74■□□□□ 0.43
TMEM248-204ENST00000424964 SPRYD7Q5W111 196 aa17.74■□□□□ 0.43
TMEM248-204ENST00000424964 GIMAP6Q6P9H5 292 aa17.74■□□□□ 0.43
TMEM248-204ENST00000424964 METTL16Q86W50 562 aaKnown RBP17.74■□□□□ 0.43
TMEM248-204ENST00000424964 OPTNQ96CV9 577 aa17.74■□□□□ 0.43
TMEM248-204ENST00000424964 EHD4Q9H223 541 aa17.74■□□□□ 0.43
TMEM248-204ENST00000424964 PICK1Q9NRD5 415 aa17.74■□□□□ 0.43
TMEM248-204ENST00000424964 SNCAIPQ9Y6H5 919 aa17.74■□□□□ 0.43
TMEM248-204ENST00000424964 SIPA1L1O43166 1804 aa17.74■□□□□ 0.43
TMEM248-204ENST00000424964 CYP2D7A0A087X1C5 515 aa17.73■□□□□ 0.43
TMEM248-204ENST00000424964 CTNND1O60716 968 aaKnown RBP17.73■□□□□ 0.43
TMEM248-204ENST00000424964 MFAP1P55081 439 aaKnown RBP17.73■□□□□ 0.43
TMEM248-204ENST00000424964 KIF23Q02241 960 aaPredicted RBP17.73■□□□□ 0.43
TMEM248-204ENST00000424964 NOL9Q5SY16 702 aaKnown RBP17.73■□□□□ 0.43
TMEM248-204ENST00000424964 C12orf60Q5U649 245 aa17.73■□□□□ 0.43
TMEM248-204ENST00000424964 CTR9Q6PD62 1173 aa17.73■□□□□ 0.43
TMEM248-204ENST00000424964 ERO1BQ86YB8 467 aa17.73■□□□□ 0.43
TMEM248-204ENST00000424964 SCYL3Q8IZE3 742 aa17.73■□□□□ 0.43
TMEM248-204ENST00000424964 IFNL3Q8IZI9 196 aa17.73■□□□□ 0.43
TMEM248-204ENST00000424964 CNKSR2Q8WXI2 1034 aa17.73■□□□□ 0.43
TMEM248-204ENST00000424964 OTUD5Q96G74 571 aa17.73■□□□□ 0.43
TMEM248-204ENST00000424964 ZIC5Q96T25 663 aa17.73■□□□□ 0.43
TMEM248-204ENST00000424964 DNAJC18Q9H819 358 aa17.73■□□□□ 0.43
TMEM248-204ENST00000424964 ARPP21Q9UBL0 812 aaPredicted RBP17.73■□□□□ 0.43
TMEM248-204ENST00000424964 CEP350Q5VT06 3117 aa17.73■□□□□ 0.43
TMEM248-204ENST00000424964 MINDY4BA8MYZ0 360 aa17.72■□□□□ 0.43
TMEM248-204ENST00000424964 EVX2Q03828 476 aa17.72■□□□□ 0.43
TMEM248-204ENST00000424964 ZNF589Q86UQ0 364 aaPredicted RBP17.72■□□□□ 0.43
TMEM248-204ENST00000424964 JMYQ8N9B5 988 aa17.72■□□□□ 0.43
TMEM248-204ENST00000424964 NAPBQ9H115 298 aa17.72■□□□□ 0.43
TMEM248-204ENST00000424964 EPB41L4AQ9HCS5 686 aaPredicted RBP17.72■□□□□ 0.43
TMEM248-204ENST00000424964 DDX60LQ5H9U9 1706 aaKnown RBP17.72■□□□□ 0.43
TMEM248-204ENST00000424964 CCDC171Q6TFL3 1326 aa17.72■□□□□ 0.43
TMEM248-204ENST00000424964 SPDYE5A6NIY4 337 aa17.71■□□□□ 0.43
TMEM248-204ENST00000424964 ZBTB48P10074 688 aaPredicted RBP17.71■□□□□ 0.43
TMEM248-204ENST00000424964 GJA5P36382 358 aa17.71■□□□□ 0.43
TMEM248-204ENST00000424964 CAP2P40123 477 aa17.71■□□□□ 0.43
TMEM248-204ENST00000424964 RRP1BQ14684 758 aaKnown RBP17.71■□□□□ 0.43
TMEM248-204ENST00000424964 SBK1Q52WX2 424 aa17.71■□□□□ 0.43
TMEM248-204ENST00000424964 VPS53Q5VIR6 699 aa17.71■□□□□ 0.43
TMEM248-204ENST00000424964 RUFY2Q8WXA3 655 aa17.71■□□□□ 0.43
TMEM248-204ENST00000424964 DYNLL2Q96FJ2 89 aa17.71■□□□□ 0.43
TMEM248-204ENST00000424964 CHMLP26374 656 aa17.7■□□□□ 0.42
TMEM248-204ENST00000424964 MAP2K1Q02750 393 aaPredicted RBP17.7■□□□□ 0.42
TMEM248-204ENST00000424964 GABPAQ06546 454 aa17.7■□□□□ 0.42
TMEM248-204ENST00000424964 BMP2KLQ5H9B9 411 aa17.7■□□□□ 0.42
TMEM248-204ENST00000424964 SWAP70Q9UH65 585 aa17.7■□□□□ 0.42
TMEM248-204ENST00000424964 DOCK1Q14185 1865 aa17.69■□□□□ 0.42
TMEM248-204ENST00000424964 MANSC4A6NHS7 340 aaPredicted RBP17.69■□□□□ 0.42
TMEM248-204ENST00000424964 SMIM22K7EJ46 135 aa17.69■□□□□ 0.42
TMEM248-204ENST00000424964 GDF11O95390 407 aa17.69■□□□□ 0.42
TMEM248-204ENST00000424964 HSPD1P10809 573 aaKnown RBP17.69■□□□□ 0.42
TMEM248-204ENST00000424964 PTPRAP18433 802 aa17.69■□□□□ 0.42
TMEM248-204ENST00000424964 PPATQ06203 517 aa17.69■□□□□ 0.42
TMEM248-204ENST00000424964 PPIL2Q13356 520 aa17.69■□□□□ 0.42
TMEM248-204ENST00000424964 CERKLQ49MI3 558 aaPredicted RBP17.69■□□□□ 0.42
TMEM248-204ENST00000424964 TATDN1Q6P1N9 297 aa17.69■□□□□ 0.42
TMEM248-204ENST00000424964 STK11IPQ8N1F8 1099 aa17.69■□□□□ 0.42
TMEM248-204ENST00000424964 SLC44A5Q8NCS7 719 aa17.69■□□□□ 0.42
TMEM248-204ENST00000424964 ZHX2Q9Y6X8 837 aa17.69■□□□□ 0.42
TMEM248-204ENST00000424964 ATAD5Q96QE3 1844 aa17.68■□□□□ 0.42
TMEM248-204ENST00000424964 IRF6O14896 467 aa17.68■□□□□ 0.42
TMEM248-204ENST00000424964 ASNSP08243 561 aa17.68■□□□□ 0.42
TMEM248-204ENST00000424964 SHMT1P34896 483 aa17.68■□□□□ 0.42
TMEM248-204ENST00000424964 CDK8P49336 464 aa17.68■□□□□ 0.42
TMEM248-204ENST00000424964 REM2Q8IYK8 340 aaPredicted RBP17.68■□□□□ 0.42
TMEM248-204ENST00000424964 BEGAINQ9BUH8 593 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms