RNA–Protein interactions for RNA: ENST00000424234.6

ACTN4-203, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 1,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-203ENST00000424234 TTC14Q96N46 770 aa16.64■□□□□ 0.25
ACTN4-203ENST00000424234 NAPBQ9H115 298 aa16.64■□□□□ 0.25
ACTN4-203ENST00000424234 LMBRD1Q9NUN5 540 aa16.64■□□□□ 0.25
ACTN4-203ENST00000424234 SCAF8Q9UPN6 1271 aaKnown RBP16.64■□□□□ 0.25
ACTN4-203ENST00000424234 FGAP02671 866 aa16.63■□□□□ 0.25
ACTN4-203ENST00000424234 POTEIP0CG38 1075 aa16.63■□□□□ 0.25
ACTN4-203ENST00000424234 POTEJP0CG39 1038 aa16.63■□□□□ 0.25
ACTN4-203ENST00000424234 TCP10Q12799 353 aa16.63■□□□□ 0.25
ACTN4-203ENST00000424234 APOBEC3FQ8IUX4 373 aaKnown RBP16.63■□□□□ 0.25
ACTN4-203ENST00000424234 NACAP1Q9BZK3 213 aa16.63■□□□□ 0.25
ACTN4-203ENST00000424234 TM6SF1Q9BZW5 370 aa16.63■□□□□ 0.25
ACTN4-203ENST00000424234 GRPEL1Q9HAV7 217 aa16.63■□□□□ 0.25
ACTN4-203ENST00000424234 RBM8AQ9Y5S9 174 aaKnown RBP16.63■□□□□ 0.25
ACTN4-203ENST00000424234 PHIPQ8WWQ0 1821 aa16.62■□□□□ 0.25
ACTN4-203ENST00000424234 ENTPD3O75355 529 aa16.62■□□□□ 0.25
ACTN4-203ENST00000424234 EVX2Q03828 476 aa16.62■□□□□ 0.25
ACTN4-203ENST00000424234 TNFAIP1Q13829 316 aa16.62■□□□□ 0.25
ACTN4-203ENST00000424234 FAM83AQ86UY5 434 aa16.62■□□□□ 0.25
ACTN4-203ENST00000424234 ZFPM1Q8IX07 1006 aa16.62■□□□□ 0.25
ACTN4-203ENST00000424234 MCM9Q9NXL9 1143 aa16.62■□□□□ 0.25
ACTN4-203ENST00000424234 ARPP21Q9UBL0 812 aaPredicted RBP16.62■□□□□ 0.25
ACTN4-203ENST00000424234 SAP30BPQ9UHR5 308 aaKnown RBP16.62■□□□□ 0.25
ACTN4-203ENST00000424234 ROBO3Q96MS0 1386 aa16.62■□□□□ 0.25
ACTN4-203ENST00000424234 SSC5DA1L4H1 1573 aa16.61■□□□□ 0.25
ACTN4-203ENST00000424234 CTR9Q6PD62 1173 aa16.61■□□□□ 0.25
ACTN4-203ENST00000424234 SH3BP5LQ7L8J4 393 aa16.61■□□□□ 0.25
ACTN4-203ENST00000424234 RASEFQ8IZ41 740 aa16.61■□□□□ 0.25
ACTN4-203ENST00000424234 ZC3H15Q8WU90 426 aaKnown RBP16.61■□□□□ 0.25
ACTN4-203ENST00000424234 PGAP2Q9UHJ9 254 aa16.61■□□□□ 0.25
ACTN4-203ENST00000424234 U3KPZ7 1027 aaPredicted RBP16.61■□□□□ 0.25
ACTN4-203ENST00000424234 PTPRFP10586 1907 aa16.61■□□□□ 0.25
ACTN4-203ENST00000424234 CYP2D7A0A087X1C5 515 aa16.6■□□□□ 0.25
ACTN4-203ENST00000424234 SMIM22K7EJ46 135 aa16.6■□□□□ 0.25
ACTN4-203ENST00000424234 CYP2D6P10635 497 aa16.6■□□□□ 0.25
ACTN4-203ENST00000424234 SLC4A8Q2Y0W8 1093 aa16.6■□□□□ 0.25
ACTN4-203ENST00000424234 NOL8Q76FK4 1167 aaKnown RBP16.6■□□□□ 0.25
ACTN4-203ENST00000424234 CDAN1Q8IWY9 1227 aa16.6■□□□□ 0.25
ACTN4-203ENST00000424234 FAM151AQ8WW52 585 aa16.6■□□□□ 0.25
ACTN4-203ENST00000424234 TMEM39BQ9GZU3 492 aa16.6■□□□□ 0.25
ACTN4-203ENST00000424234 LIMCH1Q9UPQ0 1083 aa16.6■□□□□ 0.25
ACTN4-203ENST00000424234 DDTLA6NHG4 134 aaPredicted RBP16.6■□□□□ 0.25
ACTN4-203ENST00000424234 USP17L12C9JPN9 530 aa16.6■□□□□ 0.25
ACTN4-203ENST00000424234 USP17L21D6R901 530 aa16.6■□□□□ 0.25
ACTN4-203ENST00000424234 TNNI2P48788 182 aa16.6■□□□□ 0.25
ACTN4-203ENST00000424234 RASA3Q14644 834 aa16.6■□□□□ 0.25
ACTN4-203ENST00000424234 NECTIN1Q15223 517 aa16.6■□□□□ 0.25
ACTN4-203ENST00000424234 SBK1Q52WX2 424 aa16.6■□□□□ 0.25
ACTN4-203ENST00000424234 GPBP1L1Q9HC44 474 aaPredicted RBP16.6■□□□□ 0.25
ACTN4-203ENST00000424234 ZKSCAN1P17029 563 aaPredicted RBP16.59■□□□□ 0.25
ACTN4-203ENST00000424234 AK2P54819 239 aa16.59■□□□□ 0.25
ACTN4-203ENST00000424234 HAND2P61296 217 aa16.59■□□□□ 0.25
ACTN4-203ENST00000424234 C12orf60Q5U649 245 aa16.59■□□□□ 0.25
ACTN4-203ENST00000424234 DCPSQ96C86 337 aaKnown RBP16.59■□□□□ 0.25
ACTN4-203ENST00000424234 TEPSINQ96N21 525 aa16.59■□□□□ 0.25
ACTN4-203ENST00000424234 NBPF3Q9H094 633 aa16.59■□□□□ 0.25
ACTN4-203ENST00000424234 DEFB129Q9H1M3 183 aa16.59■□□□□ 0.25
ACTN4-203ENST00000424234 CTNNA3Q9UI47 895 aa16.59■□□□□ 0.25
ACTN4-203ENST00000424234 WDR33Q9C0J8 1336 aaKnown RBP16.58■□□□□ 0.25
ACTN4-203ENST00000424234 ADM5C9JUS6 153 aa16.58■□□□□ 0.24
ACTN4-203ENST00000424234 POLR3DP05423 398 aaPredicted RBP16.58■□□□□ 0.24
ACTN4-203ENST00000424234 CYP21A2P08686 494 aa16.58■□□□□ 0.24
ACTN4-203ENST00000424234 CASTP20810 708 aaKnown RBP16.58■□□□□ 0.24
ACTN4-203ENST00000424234 ZNF445P59923 1031 aa16.58■□□□□ 0.24
ACTN4-203ENST00000424234 PPARAQ07869 468 aa16.58■□□□□ 0.24
ACTN4-203ENST00000424234 CREB3L3Q68CJ9 461 aa16.58■□□□□ 0.24
ACTN4-203ENST00000424234 LDHDQ86WU2 507 aa16.58■□□□□ 0.24
ACTN4-203ENST00000424234 FAM43AQ8N2R8 423 aa16.58■□□□□ 0.24
ACTN4-203ENST00000424234 ZSCAN31Q96LW9 406 aaPredicted RBP16.58■□□□□ 0.24
ACTN4-203ENST00000424234 DHX36Q9H2U1 1008 aaKnown RBP16.58■□□□□ 0.24
ACTN4-203ENST00000424234 ZSWIM6Q9HCJ5 1215 aa16.58■□□□□ 0.24
ACTN4-203ENST00000424234 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.58■□□□□ 0.24
ACTN4-203ENST00000424234 PPP2R3BQ9Y5P8 575 aa16.58■□□□□ 0.24
ACTN4-203ENST00000424234 CYP46A1Q9Y6A2 500 aa16.58■□□□□ 0.24
ACTN4-203ENST00000424234 TAF6LQ9Y6J9 622 aa16.58■□□□□ 0.24
ACTN4-203ENST00000424234 TCHHQ07283 1943 aa16.58■□□□□ 0.24
ACTN4-203ENST00000424234 MINDY4BA8MYZ0 360 aa16.57■□□□□ 0.24
ACTN4-203ENST00000424234 SLC27A2O14975 620 aa16.57■□□□□ 0.24
ACTN4-203ENST00000424234 YY1P25490 414 aa16.57■□□□□ 0.24
ACTN4-203ENST00000424234 PLCD1P51178 756 aa16.57■□□□□ 0.24
ACTN4-203ENST00000424234 IMMTQ16891 758 aaKnown RBP16.57■□□□□ 0.24
ACTN4-203ENST00000424234 KRT26Q7Z3Y9 468 aa16.57■□□□□ 0.24
ACTN4-203ENST00000424234 TBC1D10CQ8IV04 446 aa16.57■□□□□ 0.24
ACTN4-203ENST00000424234 SULF1Q8IWU6 871 aa16.57■□□□□ 0.24
ACTN4-203ENST00000424234 ZSCAN29Q8IWY8 852 aaPredicted RBP16.57■□□□□ 0.24
ACTN4-203ENST00000424234 AMOTL1Q8IY63 956 aa16.57■□□□□ 0.24
ACTN4-203ENST00000424234 CSRNP1Q96S65 589 aa16.57■□□□□ 0.24
ACTN4-203ENST00000424234 ANAPC4Q9UJX5 808 aa16.57■□□□□ 0.24
ACTN4-203ENST00000424234 PRPF40AO75400 957 aaKnown RBP16.56■□□□□ 0.24
ACTN4-203ENST00000424234 HLA-DOAP06340 250 aa16.56■□□□□ 0.24
ACTN4-203ENST00000424234 PSMA5P28066 241 aa16.56■□□□□ 0.24
ACTN4-203ENST00000424234 CTDSPL2Q05D32 466 aa16.56■□□□□ 0.24
ACTN4-203ENST00000424234 RNF20Q5VTR2 975 aa16.56■□□□□ 0.24
ACTN4-203ENST00000424234 RUFY3Q7L099 469 aa16.56■□□□□ 0.24
ACTN4-203ENST00000424234 GAS2L3Q86XJ1 694 aa16.56■□□□□ 0.24
ACTN4-203ENST00000424234 JAKMIP1Q96N16 626 aaKnown RBP16.56■□□□□ 0.24
ACTN4-203ENST00000424234 EHD4Q9H223 541 aa16.56■□□□□ 0.24
ACTN4-203ENST00000424234 SH2B1Q9NRF2 756 aaPredicted RBP16.56■□□□□ 0.24
ACTN4-203ENST00000424234 PDRG1Q9NUG6 133 aa16.56■□□□□ 0.24
ACTN4-203ENST00000424234 CLEC11AQ9Y240 323 aa16.56■□□□□ 0.24
ACTN4-203ENST00000424234 KIF3CO14782 793 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms