RNA–Protein interactions for RNA: ENST00000423965.2

CLCN3P1-201, Transcript of chloride voltage-gated channel 3 pseudogene 1, humanhuman

BASIC

Gene CLCN3P1, Length 1,017 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P1-201ENST00000423965 CCT4P50991 539 aaKnown RBP10.28□□□□□ -0.76
CLCN3P1-201ENST00000423965 SMAD3P84022 425 aaKnown RBP10.28□□□□□ -0.76
CLCN3P1-201ENST00000423965 SCUBE3Q8IX30 993 aa10.28□□□□□ -0.76
CLCN3P1-201ENST00000423965 ZBTB38Q8NAP3 1195 aaPredicted RBP10.28□□□□□ -0.76
CLCN3P1-201ENST00000423965 TEPSINQ96N21 525 aa10.28□□□□□ -0.76
CLCN3P1-201ENST00000423965 ASB2Q96Q27 587 aa10.28□□□□□ -0.76
CLCN3P1-201ENST00000423965 UHRF1Q96T88 793 aaPredicted RBP10.28□□□□□ -0.76
CLCN3P1-201ENST00000423965 TTYH1Q9H313 450 aaPredicted RBP10.28□□□□□ -0.76
CLCN3P1-201ENST00000423965 MINPP1Q9UNW1 487 aa10.28□□□□□ -0.76
CLCN3P1-201ENST00000423965 KDM4AO75164 1064 aa10.27□□□□□ -0.77
CLCN3P1-201ENST00000423965 FKBP1AP62942 108 aaKnown RBP10.27□□□□□ -0.77
CLCN3P1-201ENST00000423965 PPATQ06203 517 aa10.27□□□□□ -0.77
CLCN3P1-201ENST00000423965 RTL5Q5HYW3 569 aaPredicted RBP10.27□□□□□ -0.77
CLCN3P1-201ENST00000423965 PPP1R18Q6NYC8 613 aa10.27□□□□□ -0.77
CLCN3P1-201ENST00000423965 ALYREFQ86V81 257 aaKnown RBP10.27□□□□□ -0.77
CLCN3P1-201ENST00000423965 ADAMTS19Q8TE59 1207 aa10.27□□□□□ -0.77
CLCN3P1-201ENST00000423965 ZNF428Q96B54 188 aa10.27□□□□□ -0.77
CLCN3P1-201ENST00000423965 PARK7Q99497 189 aaKnown RBP10.27□□□□□ -0.77
CLCN3P1-201ENST00000423965 BSDC1Q9NW68 430 aaPredicted RBP10.27□□□□□ -0.77
CLCN3P1-201ENST00000423965 OGDHLQ9ULD0 1010 aa10.27□□□□□ -0.77
CLCN3P1-201ENST00000423965 SNCAIPQ9Y6H5 919 aa10.27□□□□□ -0.77
CLCN3P1-201ENST00000423965 ATP5J2-PTCD1G3V325 749 aa10.26□□□□□ -0.77
CLCN3P1-201ENST00000423965 PDE8AO60658 829 aa10.26□□□□□ -0.77
CLCN3P1-201ENST00000423965 U2AF1L5P0DN76 240 aaPredicted RBP10.26□□□□□ -0.77
CLCN3P1-201ENST00000423965 U2AF1Q01081 240 aaKnown RBP eCLIP10.26□□□□□ -0.77
CLCN3P1-201ENST00000423965 MORN1Q5T089 497 aa10.26□□□□□ -0.77
CLCN3P1-201ENST00000423965 TXNRD3Q86VQ6 643 aa10.26□□□□□ -0.77
CLCN3P1-201ENST00000423965 CFAP53Q96M91 514 aa10.26□□□□□ -0.77
CLCN3P1-201ENST00000423965 CDC5LQ99459 802 aaKnown RBP10.26□□□□□ -0.77
CLCN3P1-201ENST00000423965 P2RX7Q99572 595 aaKnown RBP10.26□□□□□ -0.77
CLCN3P1-201ENST00000423965 HMX1Q9NP08 348 aaPredicted RBP10.26□□□□□ -0.77
CLCN3P1-201ENST00000423965 PCDHAC2Q9Y5I4 1007 aa10.26□□□□□ -0.77
CLCN3P1-201ENST00000423965 OTOFQ9HC10 1997 aa10.26□□□□□ -0.77
CLCN3P1-201ENST00000423965 TNPO2O14787 897 aaKnown RBP10.25□□□□□ -0.77
CLCN3P1-201ENST00000423965 COL6A1P12109 1028 aa10.25□□□□□ -0.77
CLCN3P1-201ENST00000423965 GGCXP38435 758 aa10.25□□□□□ -0.77
CLCN3P1-201ENST00000423965 TNNI2P48788 182 aa10.25□□□□□ -0.77
CLCN3P1-201ENST00000423965 MRPS5P82675 430 aaKnown RBP10.25□□□□□ -0.77
CLCN3P1-201ENST00000423965 CERS5Q8N5B7 392 aa10.25□□□□□ -0.77
CLCN3P1-201ENST00000423965 LRFN3Q9BTN0 628 aa10.25□□□□□ -0.77
CLCN3P1-201ENST00000423965 ZNF70Q9UC06 446 aaPredicted RBP10.25□□□□□ -0.77
CLCN3P1-201ENST00000423965 ECM29Q5VYK3 1845 aa10.25□□□□□ -0.77
CLCN3P1-201ENST00000423965 PFASO15067 1338 aa10.25□□□□□ -0.77
CLCN3P1-201ENST00000423965 PER1O15534 1290 aaPredicted RBP10.24□□□□□ -0.77
CLCN3P1-201ENST00000423965 RBM5P52756 815 aaKnown RBP eCLIP10.24□□□□□ -0.77
CLCN3P1-201ENST00000423965 PDE4DQ08499 809 aa10.24□□□□□ -0.77
CLCN3P1-201ENST00000423965 CC2D1BQ5T0F9 858 aaKnown RBP10.24□□□□□ -0.77
CLCN3P1-201ENST00000423965 PARP9Q8IXQ6 854 aa10.24□□□□□ -0.77
CLCN3P1-201ENST00000423965 USP38Q8NB14 1042 aa10.24□□□□□ -0.77
CLCN3P1-201ENST00000423965 HOOK2Q96ED9 719 aa10.24□□□□□ -0.77
CLCN3P1-201ENST00000423965 CD209Q9NNX6 404 aa10.24□□□□□ -0.77
CLCN3P1-201ENST00000423965 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.24□□□□□ -0.77
CLCN3P1-201ENST00000423965 BABAM1Q9NWV8 329 aa10.24□□□□□ -0.77
CLCN3P1-201ENST00000423965 KCNH4Q9UQ05 1017 aa10.24□□□□□ -0.77
CLCN3P1-201ENST00000423965 SLC27A5Q9Y2P5 690 aa10.24□□□□□ -0.77
CLCN3P1-201ENST00000423965 ADH1BP00325 375 aa10.23□□□□□ -0.77
CLCN3P1-201ENST00000423965 HMGCRP04035 888 aa10.23□□□□□ -0.77
CLCN3P1-201ENST00000423965 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.23□□□□□ -0.77
CLCN3P1-201ENST00000423965 IL27Q8NEV9 243 aa10.23□□□□□ -0.77
CLCN3P1-201ENST00000423965 ZKSCAN4Q969J2 545 aaPredicted RBP10.23□□□□□ -0.77
CLCN3P1-201ENST00000423965 COA7Q96BR5 231 aa10.23□□□□□ -0.77
CLCN3P1-201ENST00000423965 WRNIP1Q96S55 665 aa10.23□□□□□ -0.77
CLCN3P1-201ENST00000423965 THEGQ9P2T0 379 aa10.23□□□□□ -0.77
CLCN3P1-201ENST00000423965 TSPYL4Q9UJ04 414 aa10.23□□□□□ -0.77
CLCN3P1-201ENST00000423965 AOX1Q06278 1338 aa10.23□□□□□ -0.77
CLCN3P1-201ENST00000423965 MGAMO43451 1857 aa10.22□□□□□ -0.77
CLCN3P1-201ENST00000423965 F8W031 263 aaPredicted RBP10.22□□□□□ -0.77
CLCN3P1-201ENST00000423965 RGS20O76081 388 aa10.22□□□□□ -0.77
CLCN3P1-201ENST00000423965 NEFMP07197 916 aa10.22□□□□□ -0.77
CLCN3P1-201ENST00000423965 MOGSQ13724 837 aa10.22□□□□□ -0.77
CLCN3P1-201ENST00000423965 SHHQ15465 462 aa10.22□□□□□ -0.77
CLCN3P1-201ENST00000423965 LRRC26Q2I0M4 334 aa10.22□□□□□ -0.77
CLCN3P1-201ENST00000423965 SPSB2Q99619 263 aa10.22□□□□□ -0.77
CLCN3P1-201ENST00000423965 TMEM39BQ9GZU3 492 aa10.22□□□□□ -0.77
CLCN3P1-201ENST00000423965 ANKRD2Q9GZV1 360 aa10.22□□□□□ -0.77
CLCN3P1-201ENST00000423965 SERPINA10Q9UK55 444 aa10.22□□□□□ -0.77
CLCN3P1-201ENST00000423965 CXCL11O14625 94 aa10.21□□□□□ -0.77
CLCN3P1-201ENST00000423965 PCCAP05165 728 aaPredicted RBP10.21□□□□□ -0.77
CLCN3P1-201ENST00000423965 CYP2C8P10632 490 aa10.21□□□□□ -0.77
CLCN3P1-201ENST00000423965 USP46P62068 366 aa10.21□□□□□ -0.77
CLCN3P1-201ENST00000423965 TMEM31Q5JXX7 168 aa10.21□□□□□ -0.77
CLCN3P1-201ENST00000423965 AKNAD1Q5T1N1 836 aa10.21□□□□□ -0.77
CLCN3P1-201ENST00000423965 CCDC85AQ96PX6 553 aaPredicted RBP10.21□□□□□ -0.77
CLCN3P1-201ENST00000423965 TDRD3Q9H7E2 651 aaKnown RBP10.21□□□□□ -0.77
CLCN3P1-201ENST00000423965 PRKAG2Q9UGJ0 569 aa10.21□□□□□ -0.77
CLCN3P1-201ENST00000423965 DNAH12Q6ZR08 3092 aa10.21□□□□□ -0.78
CLCN3P1-201ENST00000423965 TCP10L2B9ZVM9 353 aa10.2□□□□□ -0.78
CLCN3P1-201ENST00000423965 S1PR4O95977 384 aa10.2□□□□□ -0.78
CLCN3P1-201ENST00000423965 IL1R1P14778 569 aa10.2□□□□□ -0.78
CLCN3P1-201ENST00000423965 GRIN2CQ14957 1233 aa10.2□□□□□ -0.78
CLCN3P1-201ENST00000423965 DDX60LQ5H9U9 1706 aaKnown RBP10.2□□□□□ -0.78
CLCN3P1-201ENST00000423965 DCAF15Q66K64 600 aa10.2□□□□□ -0.78
CLCN3P1-201ENST00000423965 GPAT2Q6NUI2 795 aa10.2□□□□□ -0.78
CLCN3P1-201ENST00000423965 C15orf52Q6ZUT6 534 aaKnown RBP10.2□□□□□ -0.78
CLCN3P1-201ENST00000423965 CCDC191Q8NCU4 936 aa10.2□□□□□ -0.78
CLCN3P1-201ENST00000423965 SLC6A16Q9GZN6 736 aa10.2□□□□□ -0.78
CLCN3P1-201ENST00000423965 TIMELESSQ9UNS1 1208 aa10.2□□□□□ -0.78
CLCN3P1-201ENST00000423965 SLC45A1Q9Y2W3 748 aa10.2□□□□□ -0.78
CLCN3P1-201ENST00000423965 DOCK3Q8IZD9 2030 aa10.19□□□□□ -0.78
CLCN3P1-201ENST00000423965 HOXA2O43364 376 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms