RNA–Protein interactions for RNA: ENST00000422121.2

NF1-203, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-203ENST00000422121 WRNIP1Q96S55 665 aa12.06□□□□□ -0.48
NF1-203ENST00000422121 RIOK1Q9BRS2 568 aaKnown RBP12.06□□□□□ -0.48
NF1-203ENST00000422121 ZNF341Q9BYN7 854 aa12.06□□□□□ -0.48
NF1-203ENST00000422121 SALL3Q9BXA9 1300 aa12.06□□□□□ -0.48
NF1-203ENST00000422121 CA12O43570 354 aa12.05□□□□□ -0.48
NF1-203ENST00000422121 IGHDP01880 384 aa12.05□□□□□ -0.48
NF1-203ENST00000422121 PDE6AP16499 860 aa12.05□□□□□ -0.48
NF1-203ENST00000422121 TEX11Q8IYF3 940 aa12.05□□□□□ -0.48
NF1-203ENST00000422121 MIGA1Q8NAN2 632 aa12.05□□□□□ -0.48
NF1-203ENST00000422121 TGFBRAP1Q8WUH2 860 aa12.05□□□□□ -0.48
NF1-203ENST00000422121 DNAJC2Q99543 621 aaKnown RBP12.05□□□□□ -0.48
NF1-203ENST00000422121 OSBPL5Q9H0X9 879 aaPredicted RBP12.05□□□□□ -0.48
NF1-203ENST00000422121 SAGE1Q9NXZ1 904 aa12.05□□□□□ -0.48
NF1-203ENST00000422121 MAST2Q6P0Q8 1798 aa12.05□□□□□ -0.48
NF1-203ENST00000422121 HTTP42858 3142 aa12.04□□□□□ -0.48
NF1-203ENST00000422121 SPDYE5A6NIY4 337 aa12.04□□□□□ -0.48
NF1-203ENST00000422121 FAM196BA6NMK8 535 aa12.04□□□□□ -0.48
NF1-203ENST00000422121 IRF6O14896 467 aa12.04□□□□□ -0.48
NF1-203ENST00000422121 TBC1D12O60347 775 aa12.04□□□□□ -0.48
NF1-203ENST00000422121 BAG3O95817 575 aa12.04□□□□□ -0.48
NF1-203ENST00000422121 JAG1P78504 1218 aa12.04□□□□□ -0.48
NF1-203ENST00000422121 MAP3K12Q12852 859 aa12.04□□□□□ -0.48
NF1-203ENST00000422121 MOGSQ13724 837 aa12.04□□□□□ -0.48
NF1-203ENST00000422121 SLC9C2Q5TAH2 1124 aa12.04□□□□□ -0.48
NF1-203ENST00000422121 DCAF15Q66K64 600 aa12.04□□□□□ -0.48
NF1-203ENST00000422121 METTL16Q86W50 562 aaKnown RBP12.04□□□□□ -0.48
NF1-203ENST00000422121 MAPKAPK5Q8IW41 473 aa12.04□□□□□ -0.48
NF1-203ENST00000422121 BEGAINQ9BUH8 593 aa12.04□□□□□ -0.48
NF1-203ENST00000422121 DNAJC18Q9H819 358 aa12.04□□□□□ -0.48
NF1-203ENST00000422121 ECHDC1Q9NTX5 307 aa12.04□□□□□ -0.48
NF1-203ENST00000422121 PAG1Q9NWQ8 432 aa12.04□□□□□ -0.48
NF1-203ENST00000422121 LAMB1P07942 1786 aa12.04□□□□□ -0.48
NF1-203ENST00000422121 CDK5RAP2Q96SN8 1893 aa12.04□□□□□ -0.48
NF1-203ENST00000422121 SIPA1L1O43166 1804 aa12.03□□□□□ -0.48
NF1-203ENST00000422121 MANSC4A6NHS7 340 aaPredicted RBP12.03□□□□□ -0.48
NF1-203ENST00000422121 TBC1D8O95759 1140 aa12.03□□□□□ -0.48
NF1-203ENST00000422121 NOL9Q5SY16 702 aaKnown RBP12.03□□□□□ -0.48
NF1-203ENST00000422121 IFNL1Q8IU54 200 aa12.03□□□□□ -0.48
NF1-203ENST00000422121 PI4K2BQ8TCG2 481 aa12.03□□□□□ -0.48
NF1-203ENST00000422121 BRI3BPQ8WY22 251 aa12.03□□□□□ -0.48
NF1-203ENST00000422121 HOOK2Q96ED9 719 aa12.03□□□□□ -0.48
NF1-203ENST00000422121 OTUD5Q96G74 571 aa12.03□□□□□ -0.48
NF1-203ENST00000422121 CFHR5Q9BXR6 569 aa12.03□□□□□ -0.48
NF1-203ENST00000422121 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.03□□□□□ -0.48
NF1-203ENST00000422121 PALD1Q9ULE6 856 aa12.03□□□□□ -0.48
NF1-203ENST00000422121 PCDHB8Q9UN66 801 aa12.03□□□□□ -0.48
NF1-203ENST00000422121 PCDHB13Q9Y5F0 798 aa12.03□□□□□ -0.48
NF1-203ENST00000422121 CSADQ9Y600 493 aa12.03□□□□□ -0.48
NF1-203ENST00000422121 FLT1P17948 1338 aa12.03□□□□□ -0.48
NF1-203ENST00000422121 ZNF532Q9HCE3 1301 aa12.03□□□□□ -0.48
NF1-203ENST00000422121 COL2A1P02458 1487 aaPredicted RBP12.02□□□□□ -0.48
NF1-203ENST00000422121 CENPFP49454 3210 aa12.02□□□□□ -0.48
NF1-203ENST00000422121 CASP8AP2Q9UKL3 1982 aa12.02□□□□□ -0.49
NF1-203ENST00000422121 ADD2P35612 726 aa12.02□□□□□ -0.49
NF1-203ENST00000422121 INHBEP58166 350 aa12.02□□□□□ -0.49
NF1-203ENST00000422121 AAMPQ13685 434 aa12.02□□□□□ -0.49
NF1-203ENST00000422121 TTF1Q15361 905 aaPredicted RBP12.02□□□□□ -0.49
NF1-203ENST00000422121 TMED8Q6PL24 325 aaPredicted RBP12.02□□□□□ -0.49
NF1-203ENST00000422121 ERO1BQ86YB8 467 aa12.02□□□□□ -0.49
NF1-203ENST00000422121 ZSCAN29Q8IWY8 852 aaPredicted RBP12.02□□□□□ -0.49
NF1-203ENST00000422121 SMC5Q8IY18 1101 aa12.02□□□□□ -0.49
NF1-203ENST00000422121 AK9Q5TCS8 1911 aa12.01□□□□□ -0.49
NF1-203ENST00000422121 PRKAB2O43741 272 aa12.01□□□□□ -0.49
NF1-203ENST00000422121 PLCG2P16885 1265 aa12.01□□□□□ -0.49
NF1-203ENST00000422121 PTPRAP18433 802 aa12.01□□□□□ -0.49
NF1-203ENST00000422121 IRX6P78412 446 aaPredicted RBP12.01□□□□□ -0.49
NF1-203ENST00000422121 CAP1Q01518 475 aa12.01□□□□□ -0.49
NF1-203ENST00000422121 PPATQ06203 517 aa12.01□□□□□ -0.49
NF1-203ENST00000422121 SREBF2Q12772 1141 aa12.01□□□□□ -0.49
NF1-203ENST00000422121 PPIL2Q13356 520 aa12.01□□□□□ -0.49
NF1-203ENST00000422121 PDAP1Q13442 181 aaKnown RBP12.01□□□□□ -0.49
NF1-203ENST00000422121 SHROOM1Q2M3G4 852 aaPredicted RBP12.01□□□□□ -0.49
NF1-203ENST00000422121 ANKRD45Q5TZF3 282 aa12.01□□□□□ -0.49
NF1-203ENST00000422121 FAM43AQ8N2R8 423 aa12.01□□□□□ -0.49
NF1-203ENST00000422121 LCORLQ8N3X6 602 aa12.01□□□□□ -0.49
NF1-203ENST00000422121 MS4A3Q96HJ5 214 aa12.01□□□□□ -0.49
NF1-203ENST00000422121 SAP30BPQ9UHR5 308 aaKnown RBP12.01□□□□□ -0.49
NF1-203ENST00000422121 KCNH4Q9UQ05 1017 aa12.01□□□□□ -0.49
NF1-203ENST00000422121 FOCADQ5VW36 1801 aa12.01□□□□□ -0.49
NF1-203ENST00000422121 POTEB2H3BUK9 544 aa12□□□□□ -0.49
NF1-203ENST00000422121 SMIM22K7EJ46 135 aa12□□□□□ -0.49
NF1-203ENST00000422121 CTNND1O60716 968 aaKnown RBP12□□□□□ -0.49
NF1-203ENST00000422121 CCDC84Q86UT8 332 aaPredicted RBP12□□□□□ -0.49
NF1-203ENST00000422121 GCC1Q96CN9 775 aa12□□□□□ -0.49
NF1-203ENST00000422121 PUS7LQ9H0K6 701 aaKnown RBP12□□□□□ -0.49
NF1-203ENST00000422121 PI4KBQ9UBF8 816 aa12□□□□□ -0.49
NF1-203ENST00000422121 STAP2Q9UGK3 403 aa12□□□□□ -0.49
NF1-203ENST00000422121 AFG3L2Q9Y4W6 797 aa12□□□□□ -0.49
NF1-203ENST00000422121 CCL15-CCL14A0A0B4J2E2 113 aa11.99□□□□□ -0.49
NF1-203ENST00000422121 MAGEB6P1A0A0J9YX57 407 aa11.99□□□□□ -0.49
NF1-203ENST00000422121 GPR25O00155 361 aa11.99□□□□□ -0.49
NF1-203ENST00000422121 PLCD1P51178 756 aa11.99□□□□□ -0.49
NF1-203ENST00000422121 GTF2A2P52657 109 aa11.99□□□□□ -0.49
NF1-203ENST00000422121 UBE3CQ15386 1083 aa11.99□□□□□ -0.49
NF1-203ENST00000422121 CCL15Q16663 113 aa11.99□□□□□ -0.49
NF1-203ENST00000422121 SLC4A8Q2Y0W8 1093 aa11.99□□□□□ -0.49
NF1-203ENST00000422121 FOXP4Q8IVH2 680 aaPredicted RBP11.99□□□□□ -0.49
NF1-203ENST00000422121 SCYL3Q8IZE3 742 aa11.99□□□□□ -0.49
NF1-203ENST00000422121 TNS4Q8IZW8 715 aa11.99□□□□□ -0.49
NF1-203ENST00000422121 KBTBD3Q8NAB2 608 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms